# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 243 AAA_23 PF13476.1 202 0.00013 11.5 3.0 1 1 2.2e-05 0.00015 11.2 3.0 108 199 98 221 38 229 0.67 # 125 # 853 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5ff0af11-8827-4078-8b40-9129d9b689f2 # Target file: checkm_output/bins/pGCA_001687645.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001687645.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5ff0af11-8827-4078-8b40-9129d9b689f2 checkm_output/bins/pGCA_001687645.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:46:01 2020 # [ok]