# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_7 - 121 DUF87 PF01935.12 229 3.7e-05 14.5 1.7 1 1 1.5e-06 3.8e-05 14.5 1.7 81 173 3 113 1 120 0.76 # 4380 # 4742 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=13bp;gc_cont=0.342 1_21 - 228 Rep-A_N PF04057.7 101 1.2e-06 19.3 4.7 1 2 3.8e-05 0.00094 10.0 0.5 16 78 90 150 75 155 0.78 # 14503 # 15186 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.306 1_21 - 228 Rep-A_N PF04057.7 101 1.2e-06 19.3 4.7 2 2 1.3e-05 0.00033 11.4 0.6 30 78 156 204 147 227 0.77 # 14503 # 15186 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.306 1_14 - 188 Kinesin-relat_1 PF12711.2 86 0.0069 7.8 16.4 1 1 7.9e-06 0.0002 12.8 6.9 2 67 96 163 95 170 0.83 # 8858 # 9421 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.215 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/affeb54c-bc0e-4d94-b8a4-d2acf6760195 # Target file: checkm_output/bins/pGCA_001663395.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001663395.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/affeb54c-bc0e-4d94-b8a4-d2acf6760195 checkm_output/bins/pGCA_001663395.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:45:02 2020 # [ok]