# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_26 - 513 ATP_bind_3 PF01171.15 182 0.0008 14.2 0.0 1 1 3e-06 0.0016 13.2 0.0 1 62 217 273 217 331 0.76 # 24451 # 25989 # 1 # ID=3_26;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.318 20_3 - 231 Seryl_tRNA_N PF02403.17 108 7.7e-05 18.0 15.6 1 2 0.0004 0.026 9.8 3.4 47 93 64 111 60 124 0.85 # 3154 # 3846 # -1 # ID=20_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.330 20_3 - 231 Seryl_tRNA_N PF02403.17 108 7.7e-05 18.0 15.6 2 2 0.00024 0.016 10.5 5.8 40 100 129 190 120 195 0.84 # 3154 # 3846 # -1 # ID=20_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.330 42_2 - 170 Seryl_tRNA_N PF02403.17 108 0.00021 16.6 1.3 1 1 5.8e-06 0.00038 15.7 1.3 38 100 69 129 43 134 0.76 # 208 # 717 # 1 # ID=42_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 30_1 - 361 Seryl_tRNA_N PF02403.17 108 0.0052 12.1 1.3 1 1 0.00016 0.011 11.0 0.4 36 93 78 136 64 145 0.82 # 192 # 1274 # -1 # ID=30_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.376 4_25 - 336 Seryl_tRNA_N PF02403.17 108 0.0099 11.2 2.3 1 1 0.00036 0.024 9.9 0.3 39 93 54 109 47 119 0.79 # 19034 # 20041 # 1 # ID=4_25;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.388 3_4 - 210 Seryl_tRNA_N PF02403.17 108 0.022 10.1 8.7 1 2 0.001 0.069 8.5 0.4 42 93 58 112 24 120 0.67 # 2493 # 3122 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.371 3_4 - 210 Seryl_tRNA_N PF02403.17 108 0.022 10.1 8.7 2 2 0.0086 0.57 5.5 2.4 46 103 138 195 115 200 0.65 # 2493 # 3122 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.371 12_5 - 405 Seryl_tRNA_N PF02403.17 108 0.043 9.1 16.3 1 2 0.00043 0.028 9.7 3.9 46 97 257 318 240 324 0.65 # 2650 # 3864 # -1 # ID=12_5;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.379 12_5 - 405 Seryl_tRNA_N PF02403.17 108 0.043 9.1 16.3 2 2 0.0054 0.36 6.2 3.2 24 90 315 381 311 394 0.83 # 2650 # 3864 # -1 # ID=12_5;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.379 8_9 - 171 Seryl_tRNA_N PF02403.17 108 0.046 9.0 15.0 1 2 0.026 1.7 3.9 0.6 43 70 24 51 4 84 0.49 # 6648 # 7160 # -1 # ID=8_9;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.378 8_9 - 171 Seryl_tRNA_N PF02403.17 108 0.046 9.0 15.0 2 2 0.0011 0.075 8.3 9.3 34 100 91 156 59 164 0.62 # 6648 # 7160 # -1 # ID=8_9;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.378 9_20 - 335 Seryl_tRNA_N PF02403.17 108 0.065 8.6 5.8 1 1 0.00023 0.015 10.6 1.7 36 97 51 113 36 117 0.84 # 15102 # 16106 # 1 # ID=9_20;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.382 34_2 - 331 Terminase_6 PF03237.10 384 4.1e-54 179.0 0.0 1 1 4.3e-56 4.5e-54 178.9 0.0 58 382 3 311 1 313 0.94 # 220 # 1212 # -1 # ID=34_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.319 2_36 - 451 Terminase_6 PF03237.10 384 1.8e-48 160.4 0.0 1 1 2.1e-50 2.2e-48 160.1 0.0 1 381 65 430 65 433 0.94 # 50190 # 51542 # 1 # ID=2_36;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.301 6_22 - 150 Terminase_6 PF03237.10 384 1.4e-24 81.8 0.1 1 1 1.5e-26 1.5e-24 81.6 0.1 58 197 3 136 1 139 0.93 # 18538 # 18987 # -1 # ID=6_22;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 43_2 - 161 Terminase_6 PF03237.10 384 4.6e-13 43.9 0.0 1 1 5.3e-15 5.6e-13 43.6 0.0 2 95 66 161 65 161 0.98 # 182 # 664 # 1 # ID=43_2;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.298 9_12 - 114 Terminase_6 PF03237.10 384 3.6e-05 17.9 0.0 1 1 3.5e-07 3.6e-05 17.9 0.0 304 382 24 94 2 96 0.80 # 8077 # 8418 # 1 # ID=9_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.327 8_13 - 251 MipZ PF09140.6 261 1.2e-13 45.9 0.0 1 1 2.2e-13 1.1e-11 39.5 0.0 2 173 8 199 7 218 0.73 # 10372 # 11124 # 1 # ID=8_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.274 5_13 - 250 MipZ PF09140.6 261 5.7e-12 40.5 0.1 1 2 1.5e-09 8.1e-08 26.9 0.1 2 74 8 75 7 91 0.76 # 8096 # 8845 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.248 5_13 - 250 MipZ PF09140.6 261 5.7e-12 40.5 0.1 2 2 5.9e-05 0.0031 11.8 0.0 83 129 110 156 79 170 0.78 # 8096 # 8845 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.248 4_14 - 254 MipZ PF09140.6 261 2.9e-11 38.2 0.1 1 1 7.1e-12 3.8e-10 34.5 0.1 2 129 8 155 7 162 0.67 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 27_2 - 249 MipZ PF09140.6 261 4.1e-11 37.7 0.3 1 2 5.8e-09 3e-07 25.0 0.1 2 80 8 81 7 97 0.84 # 722 # 1468 # -1 # ID=27_2;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.266 27_2 - 249 MipZ PF09140.6 261 4.1e-11 37.7 0.3 2 2 8.7e-05 0.0046 11.3 0.0 84 129 109 154 88 232 0.76 # 722 # 1468 # -1 # ID=27_2;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.266 3_7 - 255 MipZ PF09140.6 261 5e-11 37.4 0.1 1 1 1.2e-11 6.3e-10 33.8 0.1 2 129 8 155 7 193 0.69 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 10_6 - 253 MipZ PF09140.6 261 3.1e-10 34.8 0.4 1 1 2.8e-10 1.5e-08 29.3 0.4 2 128 8 153 7 157 0.63 # 2518 # 3276 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=11-12bp;gc_cont=0.256 2_33 - 251 MipZ PF09140.6 261 5.6e-10 33.9 0.0 1 1 4.3e-10 2.3e-08 28.7 0.0 2 127 8 152 7 167 0.58 # 47288 # 48040 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.276 13_5 - 256 MipZ PF09140.6 261 2e-07 25.6 0.0 1 1 3.7e-08 2e-06 22.3 0.0 2 129 4 149 3 171 0.68 # 4588 # 5355 # 1 # ID=13_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.303 1_26 - 90 MipZ PF09140.6 261 0.0014 12.9 1.0 1 1 3.2e-05 0.0017 12.7 1.0 19 92 12 85 8 88 0.86 # 26132 # 26401 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 10_18 - 142 MipZ PF09140.6 261 0.004 11.5 0.0 1 1 0.00015 0.0078 10.5 0.0 2 48 77 122 76 137 0.84 # 9687 # 10112 # -1 # ID=10_18;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 4_14 - 254 YhjQ PF06564.7 244 2.9e-11 38.4 0.0 1 1 7.3e-13 5.5e-11 37.5 0.0 3 150 8 157 7 169 0.80 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 5_13 - 250 YhjQ PF06564.7 244 3.2e-05 18.6 0.0 1 1 7.9e-07 5.9e-05 17.7 0.0 3 148 8 156 6 162 0.69 # 8096 # 8845 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.248 13_5 - 256 YhjQ PF06564.7 244 0.00014 16.6 0.0 1 1 1.5e-05 0.0011 13.6 0.0 3 210 4 224 2 245 0.64 # 4588 # 5355 # 1 # ID=13_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.303 10_18 - 142 YhjQ PF06564.7 244 0.00018 16.1 0.0 1 1 3.2e-06 0.00024 15.7 0.0 3 48 77 122 75 130 0.91 # 9687 # 10112 # -1 # ID=10_18;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 8_13 - 251 YhjQ PF06564.7 244 0.00041 15.0 0.0 1 1 1.2e-05 0.0009 13.9 0.0 3 150 8 157 6 167 0.74 # 10372 # 11124 # 1 # ID=8_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.274 27_2 - 249 YhjQ PF06564.7 244 0.00095 13.8 0.0 1 1 1.7e-05 0.0013 13.3 0.0 3 141 8 147 6 168 0.75 # 722 # 1468 # -1 # ID=27_2;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.266 3_7 - 255 YhjQ PF06564.7 244 0.0015 13.2 0.0 1 1 2.9e-05 0.0022 12.6 0.0 3 144 8 151 7 161 0.75 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 5_7 - 132 SSB PF00436.20 104 1.9e-28 93.6 0.0 1 1 4.2e-31 2.2e-28 93.4 0.0 1 104 4 107 4 107 0.98 # 4287 # 4682 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.359 6_1 - 112 DUF2110 PF09883.4 225 0.021 9.7 5.9 1 3 0.0013 0.68 4.7 0.4 8 33 8 33 3 42 0.79 # 3 # 338 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.247 6_1 - 112 DUF2110 PF09883.4 225 0.021 9.7 5.9 2 3 0.0013 0.7 4.7 1.0 11 33 29 51 17 57 0.80 # 3 # 338 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.247 6_1 - 112 DUF2110 PF09883.4 225 0.021 9.7 5.9 3 3 0.00022 0.11 7.3 0.9 11 37 47 73 39 78 0.85 # 3 # 338 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.247 3_7 - 255 AAA_22 PF13401.1 131 0.0018 13.6 0.1 1 1 2.8e-05 0.0073 11.7 0.1 14 113 17 148 9 175 0.71 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 3_27 - 486 AAA_22 PF13401.1 131 0.008 11.6 1.9 1 2 0.00024 0.064 8.7 0.2 73 101 165 197 129 217 0.69 # 26009 # 27466 # 1 # ID=3_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 3_27 - 486 AAA_22 PF13401.1 131 0.008 11.6 1.9 2 2 0.033 8.7 1.8 0.1 74 114 232 270 206 284 0.71 # 26009 # 27466 # 1 # ID=3_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 4_14 - 254 ATP_bind_1 PF03029.12 238 0.00046 15.0 0.1 1 2 1.3e-05 0.0034 12.2 0.0 6 42 17 53 15 150 0.88 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 4_14 - 254 ATP_bind_1 PF03029.12 238 0.00046 15.0 0.1 2 2 0.027 7 1.3 0.0 88 99 122 133 78 177 0.63 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 3_7 - 255 ATP_bind_1 PF03029.12 238 0.0023 12.7 0.0 1 1 1.5e-05 0.0039 12.0 0.0 6 44 17 55 15 132 0.88 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 3_28 - 293 RRM_1 PF00076.17 70 0.0047 11.9 0.5 1 2 0.0099 5.2 2.1 0.1 8 48 46 86 45 89 0.77 # 28246 # 29124 # 1 # ID=3_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.323 3_28 - 293 RRM_1 PF00076.17 70 0.0047 11.9 0.5 2 2 0.00025 0.13 7.2 0.0 14 33 226 245 222 254 0.90 # 28246 # 29124 # 1 # ID=3_28;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.323 3_7 - 255 SRP54 PF00448.17 196 0.0039 11.9 0.0 1 2 0.00033 0.17 6.5 0.0 11 38 17 44 6 69 0.88 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 3_7 - 255 SRP54 PF00448.17 196 0.0039 11.9 0.0 2 2 0.0031 1.6 3.3 0.0 79 92 120 133 87 145 0.74 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 3_26 - 513 NAD_synthase PF02540.12 242 7.2e-12 39.9 0.1 1 2 1.4e-11 7.3e-09 30.1 0.1 8 94 205 290 197 300 0.81 # 24451 # 25989 # 1 # ID=3_26;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.318 3_26 - 513 NAD_synthase PF02540.12 242 7.2e-12 39.9 0.1 2 2 0.00012 0.061 7.4 0.0 148 177 360 389 357 396 0.94 # 24451 # 25989 # 1 # ID=3_26;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.318 3_7 - 255 ArsA_ATPase PF02374.10 305 7.3e-13 43.4 0.4 1 1 8.7e-14 5.1e-12 40.6 0.2 7 137 13 135 6 142 0.69 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 8_13 - 251 ArsA_ATPase PF02374.10 305 6.4e-11 37.0 0.0 1 1 3e-12 1.8e-10 35.6 0.0 7 139 13 138 6 145 0.74 # 10372 # 11124 # 1 # ID=8_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.274 5_13 - 250 ArsA_ATPase PF02374.10 305 1.4e-09 32.6 1.1 1 1 1.4e-10 8.1e-09 30.1 0.3 7 136 13 135 6 138 0.73 # 8096 # 8845 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.248 4_14 - 254 ArsA_ATPase PF02374.10 305 3.9e-09 31.2 0.2 1 1 3.7e-10 2.2e-08 28.7 0.2 9 139 15 137 7 208 0.78 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 27_2 - 249 ArsA_ATPase PF02374.10 305 2.1e-08 28.8 2.7 1 1 3.2e-09 1.9e-07 25.7 0.5 7 136 13 133 6 138 0.65 # 722 # 1468 # -1 # ID=27_2;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.266 10_18 - 142 ArsA_ATPase PF02374.10 305 7e-08 27.1 0.0 1 1 3.4e-09 2e-07 25.6 0.0 4 49 78 124 75 133 0.86 # 9687 # 10112 # -1 # ID=10_18;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 10_6 - 253 ArsA_ATPase PF02374.10 305 1e-07 26.5 1.0 1 1 2.9e-08 1.7e-06 22.5 1.0 7 136 13 133 6 139 0.68 # 2518 # 3276 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=11-12bp;gc_cont=0.256 2_33 - 251 ArsA_ATPase PF02374.10 305 2.9e-06 21.7 1.1 1 1 8.4e-07 4.9e-05 17.7 1.1 7 51 13 56 6 138 0.56 # 47288 # 48040 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.276 13_5 - 256 ArsA_ATPase PF02374.10 305 0.0003 15.1 0.7 1 1 2.2e-05 0.0013 13.0 0.1 9 136 11 128 4 138 0.69 # 4588 # 5355 # 1 # ID=13_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.303 43_2 - 161 PhoH PF02562.11 205 0.0011 13.5 0.0 1 1 6.3e-06 0.0017 12.9 0.0 5 47 45 89 43 102 0.80 # 182 # 664 # 1 # ID=43_2;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.298 2_36 - 451 PhoH PF02562.11 205 0.0017 12.9 0.0 1 1 5.7e-05 0.015 9.7 0.0 5 152 45 196 43 222 0.72 # 50190 # 51542 # 1 # ID=2_36;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.301 43_2 - 161 T2SE PF00437.15 272 0.0019 12.4 0.0 1 1 3.7e-06 0.002 12.3 0.0 116 154 51 88 14 118 0.79 # 182 # 664 # 1 # ID=43_2;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.298 1_80 - 282 Cytidylate_kin2 PF13189.1 179 0.002 13.3 0.1 1 1 1.1e-05 0.0056 11.8 0.1 110 165 17 72 12 83 0.87 # 84437 # 85282 # 1 # ID=1_80;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 8_20 - 72 Phe_tRNA-synt_N PF02912.13 73 0.0016 13.5 0.1 1 1 3.6e-06 0.0019 13.2 0.1 22 52 17 47 14 58 0.91 # 13926 # 14141 # 1 # ID=8_20;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=11-12bp;gc_cont=0.398 27_2 - 249 VirC1 PF07015.6 231 9.3e-08 26.6 0.0 1 2 1.5e-07 9.7e-06 20.0 0.0 2 55 7 59 6 77 0.82 # 722 # 1468 # -1 # ID=27_2;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.266 27_2 - 249 VirC1 PF07015.6 231 9.3e-08 26.6 0.0 2 2 0.0075 0.5 4.6 0.0 64 180 101 213 97 221 0.69 # 722 # 1468 # -1 # ID=27_2;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.266 8_13 - 251 VirC1 PF07015.6 231 2e-07 25.5 0.0 1 2 1.1e-06 7.1e-05 17.2 0.0 2 46 7 51 6 73 0.89 # 10372 # 11124 # 1 # ID=8_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.274 8_13 - 251 VirC1 PF07015.6 231 2e-07 25.5 0.0 2 2 0.0018 0.12 6.7 0.0 80 113 121 154 100 231 0.77 # 10372 # 11124 # 1 # ID=8_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.274 3_7 - 255 VirC1 PF07015.6 231 3.5e-06 21.5 0.0 1 2 9.8e-07 6.5e-05 17.3 0.0 2 41 7 46 6 81 0.88 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 3_7 - 255 VirC1 PF07015.6 231 3.5e-06 21.5 0.0 2 2 0.04 2.7 2.2 0.0 82 113 123 154 102 195 0.79 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 10_6 - 253 VirC1 PF07015.6 231 6.1e-06 20.7 0.3 1 2 1.4e-06 9.4e-05 16.8 0.0 2 41 7 45 6 63 0.83 # 2518 # 3276 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=11-12bp;gc_cont=0.256 10_6 - 253 VirC1 PF07015.6 231 6.1e-06 20.7 0.3 2 2 0.049 3.2 2.0 0.0 84 150 124 186 102 228 0.66 # 2518 # 3276 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=11-12bp;gc_cont=0.256 5_13 - 250 VirC1 PF07015.6 231 1.3e-05 19.6 1.6 1 1 7.6e-07 5e-05 17.7 0.1 2 42 7 46 6 61 0.85 # 8096 # 8845 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.248 2_33 - 251 VirC1 PF07015.6 231 2.9e-05 18.5 1.5 1 2 2.6e-05 0.0017 12.7 0.0 2 41 7 45 6 62 0.75 # 47288 # 48040 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.276 2_33 - 251 VirC1 PF07015.6 231 2.9e-05 18.5 1.5 2 2 0.01 0.68 4.2 0.0 83 134 123 173 99 217 0.73 # 47288 # 48040 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.276 4_14 - 254 VirC1 PF07015.6 231 3.6e-05 18.2 0.0 1 2 0.00069 0.046 8.0 0.0 3 47 8 52 6 70 0.87 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 4_14 - 254 VirC1 PF07015.6 231 3.6e-05 18.2 0.0 2 2 0.00064 0.042 8.1 0.1 83 156 124 197 109 208 0.88 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 10_18 - 142 VirC1 PF07015.6 231 0.0016 12.8 0.0 1 1 3.1e-05 0.0021 12.4 0.0 2 45 76 119 75 127 0.90 # 9687 # 10112 # -1 # ID=10_18;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 3_26 - 513 TIGR02432 TIGR02432 189 0.00051 14.9 0.0 1 1 1.8e-06 0.00096 14.1 0.0 1 94 217 305 217 381 0.62 # 24451 # 25989 # 1 # ID=3_26;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.318 3_7 - 255 Fer4_NifH PF00142.13 273 6.5e-08 27.3 0.1 1 1 3e-09 2.3e-07 25.5 0.0 8 54 15 61 8 95 0.75 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 8_13 - 251 Fer4_NifH PF00142.13 273 1.2e-07 26.4 0.0 1 2 2.2e-07 1.6e-05 19.4 0.0 8 56 15 62 8 97 0.82 # 10372 # 11124 # 1 # ID=8_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.274 8_13 - 251 Fer4_NifH PF00142.13 273 1.2e-07 26.4 0.0 2 2 0.0038 0.28 5.5 0.0 187 225 192 230 105 250 0.73 # 10372 # 11124 # 1 # ID=8_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.274 4_14 - 254 Fer4_NifH PF00142.13 273 2.2e-05 19.0 0.0 1 1 5.8e-07 4.3e-05 18.0 0.0 8 49 15 56 9 80 0.85 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 2_33 - 251 Fer4_NifH PF00142.13 273 6.2e-05 17.5 0.2 1 1 1.9e-06 0.00014 16.3 0.0 8 54 15 60 8 84 0.81 # 47288 # 48040 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.276 10_18 - 142 Fer4_NifH PF00142.13 273 8.8e-05 17.0 0.0 1 1 2.7e-06 0.0002 15.8 0.0 8 43 84 119 77 131 0.89 # 9687 # 10112 # -1 # ID=10_18;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 10_6 - 253 Fer4_NifH PF00142.13 273 0.00013 16.5 0.6 1 1 2.5e-06 0.00019 15.9 0.1 8 52 15 58 7 84 0.80 # 2518 # 3276 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=11-12bp;gc_cont=0.256 5_13 - 250 Fer4_NifH PF00142.13 273 0.00023 15.7 0.0 1 1 5.1e-06 0.00038 14.9 0.0 8 56 15 61 7 87 0.75 # 8096 # 8845 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.248 3_26 - 513 QueC PF06508.8 210 6.8e-06 20.7 0.0 1 1 7.1e-08 3.8e-05 18.3 0.0 2 175 218 380 217 388 0.72 # 24451 # 25989 # 1 # ID=3_26;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.318 20_3 - 231 AAA_13 PF13166.1 712 2.7e-08 27.9 7.8 1 1 4e-10 3.5e-08 27.6 7.8 283 431 48 192 39 209 0.80 # 3154 # 3846 # -1 # ID=20_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.330 2_3 - 236 AAA_13 PF13166.1 712 3e-05 17.9 8.7 1 1 4.2e-07 3.7e-05 17.6 8.7 309 471 36 195 7 210 0.67 # 9090 # 9797 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.331 9_13 - 174 AAA_13 PF13166.1 712 5.5e-05 17.0 8.4 1 1 7.9e-07 7e-05 16.7 8.4 266 364 39 143 36 151 0.78 # 8458 # 8979 # 1 # ID=9_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.293 42_2 - 170 AAA_13 PF13166.1 712 0.00017 15.4 1.9 1 1 2.2e-06 0.00019 15.2 1.9 310 402 37 128 7 138 0.76 # 208 # 717 # 1 # ID=42_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 6_1 - 112 AAA_13 PF13166.1 712 0.00066 13.4 4.2 1 1 7.8e-06 0.00069 13.4 4.2 91 150 12 70 1 93 0.40 # 3 # 338 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.247 6_18 - 135 AAA_13 PF13166.1 712 0.00083 13.1 0.1 1 1 1e-05 0.00089 13.0 0.1 259 334 33 105 8 111 0.84 # 13517 # 13921 # -1 # ID=6_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.294 27_2 - 249 CbiA PF01656.18 195 1.8e-36 120.6 0.1 1 1 4.1e-38 2.2e-36 120.3 0.1 1 193 9 215 9 217 0.87 # 722 # 1468 # -1 # ID=27_2;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.266 8_13 - 251 CbiA PF01656.18 195 8.7e-36 118.4 0.1 1 1 2e-37 1.1e-35 118.1 0.1 1 194 9 221 9 222 0.79 # 10372 # 11124 # 1 # ID=8_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.274 10_6 - 253 CbiA PF01656.18 195 1.1e-35 118.0 1.7 1 1 6.2e-37 3.3e-35 116.5 1.7 1 171 9 197 9 247 0.81 # 2518 # 3276 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=11-12bp;gc_cont=0.256 5_13 - 250 CbiA PF01656.18 195 4.5e-35 116.0 0.2 1 1 1.1e-36 5.7e-35 115.7 0.2 1 177 9 205 9 225 0.78 # 8096 # 8845 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.248 3_7 - 255 CbiA PF01656.18 195 1.8e-34 114.1 0.1 1 1 4.2e-36 2.2e-34 113.8 0.1 1 191 9 218 9 222 0.79 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 4_14 - 254 CbiA PF01656.18 195 7.7e-34 112.0 0.2 1 1 1.9e-35 9.8e-34 111.7 0.2 1 192 9 222 9 224 0.79 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 2_33 - 251 CbiA PF01656.18 195 8.2e-33 108.7 0.1 1 1 1.9e-34 1e-32 108.4 0.1 1 169 9 197 9 219 0.78 # 47288 # 48040 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.276 13_5 - 256 CbiA PF01656.18 195 2.4e-29 97.4 0.0 1 1 6e-31 3.2e-29 97.0 0.0 1 193 5 219 5 221 0.75 # 4588 # 5355 # 1 # ID=13_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.303 23_2 - 101 CbiA PF01656.18 195 1.9e-14 48.8 0.0 1 1 4.2e-16 2.2e-14 48.5 0.0 84 168 4 85 2 97 0.82 # 355 # 657 # 1 # ID=23_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 10_18 - 142 CbiA PF01656.18 195 7.7e-12 40.2 0.1 1 1 2.9e-13 1.5e-11 39.3 0.0 1 48 78 125 78 140 0.88 # 9687 # 10112 # -1 # ID=10_18;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 3_26 - 513 PAPS_reduct PF01507.14 174 1e-06 24.0 0.0 1 1 5.9e-09 1.6e-06 23.3 0.0 2 77 218 294 217 391 0.78 # 24451 # 25989 # 1 # ID=3_26;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.318 17_3 - 305 PAPS_reduct PF01507.14 174 0.0086 11.1 2.8 1 1 6.4e-05 0.017 10.2 2.7 34 98 133 195 113 242 0.89 # 2125 # 3039 # 1 # ID=17_3;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.323 20_3 - 231 Val_tRNA-synt_C PF10458.4 66 0.0019 13.5 13.7 1 4 0.09 24 0.4 0.0 16 29 72 85 70 87 0.77 # 3154 # 3846 # -1 # ID=20_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.330 20_3 - 231 Val_tRNA-synt_C PF10458.4 66 0.0019 13.5 13.7 2 4 0.00048 0.13 7.7 0.6 3 29 84 110 76 112 0.80 # 3154 # 3846 # -1 # ID=20_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.330 20_3 - 231 Val_tRNA-synt_C PF10458.4 66 0.0019 13.5 13.7 3 4 0.0029 0.77 5.2 2.4 4 27 132 155 104 156 0.66 # 3154 # 3846 # -1 # ID=20_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.330 20_3 - 231 Val_tRNA-synt_C PF10458.4 66 0.0019 13.5 13.7 4 4 0.0025 0.66 5.4 5.0 8 64 129 182 122 184 0.59 # 3154 # 3846 # -1 # ID=20_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.330 15_1 - 134 Val_tRNA-synt_C PF10458.4 66 0.051 9.0 7.0 1 2 0.04 10 1.6 0.1 9 34 50 73 42 74 0.76 # 3 # 404 # -1 # ID=15_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.313 15_1 - 134 Val_tRNA-synt_C PF10458.4 66 0.051 9.0 7.0 2 2 8e-05 0.021 10.2 1.2 1 29 77 106 77 119 0.88 # 3 # 404 # -1 # ID=15_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.313 14_5 - 1049 N6_Mtase PF02384.11 311 2.4e-13 45.0 2.8 1 2 0.012 6.2 1.0 0.0 99 126 70 97 64 117 0.83 # 1955 # 5101 # 1 # ID=14_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.256 14_5 - 1049 N6_Mtase PF02384.11 311 2.4e-13 45.0 2.8 2 2 5e-15 2.7e-12 41.6 0.8 9 188 320 568 313 577 0.76 # 1955 # 5101 # 1 # ID=14_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.256 1_76 - 322 POT1 PF02765.12 146 0.00041 15.5 0.0 1 1 1.3e-06 0.00067 14.8 0.0 56 103 97 143 76 174 0.87 # 79757 # 80722 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 3_26 - 513 Asn_synthase PF00733.16 255 0.00024 15.9 0.0 1 1 1.5e-06 0.00079 14.2 0.0 6 75 205 273 198 288 0.81 # 24451 # 25989 # 1 # ID=3_26;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.318 10_6 - 253 AAA_31 PF13614.1 157 4.4e-19 64.2 0.4 1 1 1.3e-20 7.1e-19 63.5 0.4 1 152 7 157 7 162 0.81 # 2518 # 3276 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=11-12bp;gc_cont=0.256 5_13 - 250 AAA_31 PF13614.1 157 2e-18 62.0 0.7 1 1 6e-20 3.2e-18 61.4 0.7 1 154 7 161 7 164 0.86 # 8096 # 8845 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.248 27_2 - 249 AAA_31 PF13614.1 157 5.9e-16 54.0 0.5 1 1 1.8e-17 9.6e-16 53.3 0.5 1 155 7 160 7 162 0.86 # 722 # 1468 # -1 # ID=27_2;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.266 2_33 - 251 AAA_31 PF13614.1 157 8.8e-15 50.2 0.5 1 1 3.2e-16 1.7e-14 49.3 0.5 1 152 7 157 7 162 0.85 # 47288 # 48040 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.276 3_7 - 255 AAA_31 PF13614.1 157 7e-14 47.3 0.4 1 1 2.6e-15 1.4e-13 46.3 0.4 1 134 7 141 7 162 0.77 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 4_14 - 254 AAA_31 PF13614.1 157 1.3e-13 46.4 0.5 1 1 3.9e-15 2e-13 45.8 0.5 2 155 8 161 7 163 0.87 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 8_13 - 251 AAA_31 PF13614.1 157 4.1e-13 44.8 0.6 1 1 1.3e-14 7e-13 44.0 0.6 2 152 8 158 7 163 0.79 # 10372 # 11124 # 1 # ID=8_13;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.274 13_5 - 256 AAA_31 PF13614.1 157 1e-12 43.5 0.1 1 1 3.9e-14 2.1e-12 42.5 0.1 2 150 4 150 3 157 0.80 # 4588 # 5355 # 1 # ID=13_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.303 10_18 - 142 AAA_31 PF13614.1 157 1.1e-06 23.9 0.0 1 1 6.1e-08 3.2e-06 22.4 0.0 2 48 77 123 76 140 0.91 # 9687 # 10112 # -1 # ID=10_18;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 23_2 - 101 AAA_31 PF13614.1 157 0.0012 14.1 0.0 1 1 3e-05 0.0016 13.6 0.0 115 156 11 51 7 52 0.90 # 355 # 657 # 1 # ID=23_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 14_5 - 1049 Methyltransf_26 PF13659.1 117 1.2e-05 20.6 0.0 1 1 4.6e-08 2.4e-05 19.6 0.0 2 90 373 510 372 565 0.78 # 1955 # 5101 # 1 # ID=14_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.256 20_1 - 399 Ribosomal_S15 PF00312.17 83 0.0019 13.2 0.2 1 2 0.002 0.35 6.0 0.1 41 67 306 332 303 339 0.89 # 145 # 1341 # -1 # ID=20_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.318 20_1 - 399 Ribosomal_S15 PF00312.17 83 0.0019 13.2 0.2 2 2 0.0047 0.82 4.8 0.0 13 33 350 370 337 376 0.83 # 145 # 1341 # -1 # ID=20_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.318 6_1 - 112 Ribosomal_S15 PF00312.17 83 0.0076 11.3 5.8 1 2 0.04 7 1.8 0.2 27 48 11 32 7 37 0.80 # 3 # 338 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.247 6_1 - 112 Ribosomal_S15 PF00312.17 83 0.0076 11.3 5.8 2 2 6.4e-05 0.011 10.7 2.1 16 57 36 77 32 83 0.88 # 3 # 338 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.247 31_2 - 250 Ribosomal_S15 PF00312.17 83 0.012 10.7 21.9 1 3 0.0003 0.053 8.6 0.8 12 48 54 90 46 96 0.90 # 352 # 1101 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.281 31_2 - 250 Ribosomal_S15 PF00312.17 83 0.012 10.7 21.9 2 3 0.0016 0.28 6.3 1.2 15 48 133 166 126 177 0.89 # 352 # 1101 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.281 31_2 - 250 Ribosomal_S15 PF00312.17 83 0.012 10.7 21.9 3 3 0.00045 0.08 8.0 1.8 15 57 180 222 171 230 0.87 # 352 # 1101 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.281 14_5 - 1049 Eco57I PF07669.6 106 4.1e-05 19.2 0.8 1 1 6.3e-07 0.00033 16.3 0.1 5 71 495 582 491 607 0.82 # 1955 # 5101 # 1 # ID=14_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.256 15_5 - 94 Ubiquitin_3 PF14836.1 88 2.1e-06 22.6 2.1 1 2 1.2e-07 6.2e-05 17.9 0.3 16 42 6 32 1 36 0.88 # 3044 # 3325 # 1 # ID=15_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.266 15_5 - 94 Ubiquitin_3 PF14836.1 88 2.1e-06 22.6 2.1 2 2 0.0013 0.67 5.0 0.1 32 50 37 55 33 77 0.78 # 3044 # 3325 # 1 # ID=15_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.266 3_7 - 255 AAA_10 PF12846.2 304 0.0011 13.6 0.1 1 1 3.8e-06 0.002 12.8 0.1 11 73 17 77 15 213 0.76 # 5593 # 6357 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.278 20_3 - 231 DUF3584 PF12128.3 1201 9.7e-10 31.6 2.0 1 1 2e-11 1.2e-09 31.4 2.0 367 502 57 190 34 195 0.92 # 3154 # 3846 # -1 # ID=20_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.330 21_4 - 239 DUF3584 PF12128.3 1201 1.7e-06 20.9 11.3 1 1 4.6e-08 2.7e-06 20.2 11.3 304 440 55 192 34 213 0.53 # 2941 # 3657 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.271 31_2 - 250 DUF3584 PF12128.3 1201 6.3e-06 19.0 18.4 1 1 3.1e-07 1.8e-05 17.5 18.4 266 421 60 213 37 231 0.41 # 352 # 1101 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.281 36_2 - 221 DUF3584 PF12128.3 1201 1.5e-05 17.8 6.9 1 1 3.3e-07 2e-05 17.4 6.9 357 460 84 187 37 195 0.67 # 174 # 836 # -1 # ID=36_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.279 2_3 - 236 DUF3584 PF12128.3 1201 1.6e-05 17.6 4.1 1 1 4.9e-07 2.9e-05 16.8 4.1 328 459 46 179 41 196 0.77 # 9090 # 9797 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.331 4_34 - 247 DUF3584 PF12128.3 1201 2.7e-05 16.9 11.9 1 1 7.6e-07 4.4e-05 16.2 11.9 297 451 59 222 27 227 0.65 # 24553 # 25293 # -1 # ID=4_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.278 47_1 - 179 DUF3584 PF12128.3 1201 4e-05 16.4 12.6 1 1 8.4e-07 4.9e-05 16.1 12.6 280 409 42 176 18 179 0.53 # 3 # 539 # -1 # ID=47_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.270 6_1 - 112 DUF3584 PF12128.3 1201 0.00017 14.2 1.5 1 1 3.3e-06 0.00019 14.1 1.5 375 451 4 80 1 89 0.58 # 3 # 338 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.247 6_16 - 203 DUF3584 PF12128.3 1201 0.00049 12.7 4.2 1 1 1e-05 0.0006 12.5 4.2 817 917 29 130 19 149 0.87 # 11877 # 12485 # 1 # ID=6_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 3_2 - 280 TIGR00019 TIGR00019 361 0.0014 12.5 0.3 1 1 4.5e-06 0.0024 11.8 0.3 3 100 137 236 135 242 0.79 # 132 # 971 # -1 # ID=3_2;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.308 1_65 - 207 Methyltrn_RNA_3 PF02598.12 291 0.0024 12.5 0.0 1 1 5.8e-06 0.0031 12.1 0.0 138 200 17 80 12 136 0.91 # 68181 # 68801 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.327 7_11 - 398 Terminase_3 PF04466.8 387 3.1e-92 304.8 0.0 1 1 2.6e-94 4.6e-92 304.3 0.0 3 386 20 394 18 395 0.96 # 9215 # 10408 # 1 # ID=7_11;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.371 34_2 - 331 Terminase_3 PF04466.8 387 7.4e-11 36.9 0.3 1 1 5.4e-13 9.6e-11 36.6 0.3 100 232 45 170 25 212 0.86 # 220 # 1212 # -1 # ID=34_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.319 6_22 - 150 Terminase_3 PF04466.8 387 6e-07 24.1 0.1 1 1 3.9e-09 6.8e-07 23.9 0.1 100 200 45 138 20 145 0.85 # 18538 # 18987 # -1 # ID=6_22;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 6_16 - 203 AAA_32 PF13654.1 509 0.0012 12.8 2.6 1 1 8.7e-06 0.0015 12.4 2.6 174 272 30 133 22 151 0.79 # 11877 # 12485 # 1 # ID=6_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 31_2 - 250 AAA_32 PF13654.1 509 0.0018 12.2 15.0 1 2 4.5e-05 0.0079 10.1 5.8 162 262 37 140 32 152 0.85 # 352 # 1101 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.281 31_2 - 250 AAA_32 PF13654.1 509 0.0018 12.2 15.0 2 2 0.00072 0.13 6.1 8.1 168 258 119 212 95 226 0.77 # 352 # 1101 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.281 20_3 - 231 AAA_32 PF13654.1 509 0.0085 10.0 6.3 1 1 0.00037 0.066 7.0 6.3 161 257 64 163 36 187 0.58 # 3154 # 3846 # -1 # ID=20_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.330 29_1 - 483 Amino_oxidase PF01593.19 450 0.0039 11.5 0.2 1 1 1.1e-05 0.006 10.9 0.2 31 188 13 203 11 341 0.83 # 3 # 1451 # 1 # ID=29_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.380 5_4 - 273 MethyltransfD12 PF02086.10 260 5e-13 44.3 3.4 1 1 6.1e-15 3.2e-12 41.7 3.4 3 189 8 172 7 230 0.74 # 2629 # 3447 # -1 # ID=5_4;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.313 4_14 - 254 ArgK PF03308.11 267 0.006 10.6 0.0 1 1 1.8e-05 0.0093 10.0 0.0 38 71 16 49 5 52 0.88 # 10115 # 10876 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.238 2_36 - 451 AAA_28 PF13521.1 163 0.0022 13.2 0.0 1 2 0.00052 0.28 6.4 0.0 1 19 63 81 63 94 0.91 # 50190 # 51542 # 1 # ID=2_36;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.301 2_36 - 451 AAA_28 PF13521.1 163 0.0022 13.2 0.0 2 2 0.0019 0.99 4.6 0.0 68 110 186 227 162 281 0.81 # 50190 # 51542 # 1 # ID=2_36;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.301 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/bf4d00c7-238f-4a93-9a3b-1140f2d6ca47 # Target file: checkm_output/bins/pGCA_001660005.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001660005.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/bf4d00c7-238f-4a93-9a3b-1140f2d6ca47 checkm_output/bins/pGCA_001660005.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:45:05 2020 # [ok]