# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_15 - 444 3HCDH_N PF02737.13 180 3.1e-06 18.0 0.1 1 1 5.5e-07 7.5e-06 16.7 0.1 1 39 165 203 165 244 0.84 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_1 - 122 3HCDH_N PF02737.13 180 0.00014 12.6 1.7 1 1 1.9e-05 0.00026 11.7 1.7 2 30 6 34 5 115 0.87 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 GIDA PF01134.17 392 6e-13 39.3 1.3 1 2 1.4e-11 3.8e-10 30.1 0.1 1 51 5 69 5 81 0.85 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 GIDA PF01134.17 392 6e-13 39.3 1.3 2 2 2.2e-05 0.00058 9.7 0.1 110 150 73 112 60 119 0.81 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_15 - 444 Pyr_redox_2 PF07992.9 201 1e-33 107.9 0.1 1 1 4.8e-34 4.3e-33 105.9 0.1 1 198 4 301 4 303 0.86 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_1 - 122 Pyr_redox_2 PF07992.9 201 1.1e-20 65.4 0.5 1 1 1.4e-21 1.3e-20 65.2 0.5 1 130 5 122 5 122 0.85 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_18 - 232 Pyr_redox_2 PF07992.9 201 1.2e-20 65.2 0.6 1 1 2.1e-21 1.8e-20 64.7 0.6 102 198 12 196 1 199 0.86 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_1 - 122 Trp_halogenase PF04820.9 454 0.00064 9.4 2.9 1 2 9.6e-05 0.0026 7.4 0.4 1 28 5 29 5 35 0.84 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 Trp_halogenase PF04820.9 454 0.00064 9.4 2.9 2 2 0.0027 0.074 2.6 0.1 165 208 70 111 61 118 0.72 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_15 - 444 NAD_binding_7 PF13241.1 103 8.9e-07 20.3 0.1 1 2 0.013 0.34 2.3 0.0 10 40 5 35 2 129 0.81 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 NAD_binding_7 PF13241.1 103 8.9e-07 20.3 0.1 2 2 1.3e-06 3.5e-05 15.2 0.0 7 44 163 200 158 262 0.78 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 Semialdhyde_dh PF01118.19 121 1e-05 16.9 0.1 1 1 7.8e-07 2.1e-05 15.9 0.1 1 43 165 206 165 240 0.73 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 Shikimate_DH PF01488.15 135 0.00018 12.7 0.0 1 1 2.3e-05 0.00063 10.9 0.0 13 56 164 206 154 256 0.84 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_1 - 122 NAD_binding_8 PF13450.1 68 2.7e-08 24.9 0.2 1 1 3.7e-09 5e-08 24.0 0.2 1 40 8 46 8 92 0.87 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_15 - 444 NAD_binding_8 PF13450.1 68 1.4e-06 19.4 0.7 1 3 0.016 0.22 2.8 0.0 1 35 7 40 7 58 0.82 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 NAD_binding_8 PF13450.1 68 1.4e-06 19.4 0.7 2 3 2.5e-05 0.00033 11.8 0.2 1 25 168 192 168 198 0.96 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 NAD_binding_8 PF13450.1 68 1.4e-06 19.4 0.7 3 3 0.062 0.84 0.9 0.0 23 35 386 398 375 424 0.84 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 F420_oxidored PF03807.12 96 0.00013 13.5 0.2 1 2 0.091 2.5 -0.2 0.0 3 31 6 31 4 36 0.83 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 F420_oxidored PF03807.12 96 0.00013 13.5 0.2 2 2 4.2e-05 0.0011 10.5 0.2 2 39 166 199 165 236 0.76 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 FAD_binding_3 PF01494.14 356 5.5e-08 23.2 0.6 1 1 9.4e-09 1.3e-07 22.0 0.6 3 58 165 220 164 312 0.86 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_1 - 122 FAD_binding_3 PF01494.14 356 1.3e-05 15.4 0.1 1 1 1.5e-06 2e-05 14.7 0.1 2 32 4 34 3 37 0.92 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 HI0933_like PF03486.9 409 7.7e-12 35.3 2.3 1 2 1.8e-09 2.4e-08 23.8 0.5 1 32 4 35 4 43 0.94 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 HI0933_like PF03486.9 409 7.7e-12 35.3 2.3 2 2 9.5e-06 0.00013 11.5 0.0 124 165 74 113 57 118 0.84 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_15 - 444 HI0933_like PF03486.9 409 0.00027 10.5 4.9 1 4 0.03 0.41 -0.0 0.0 2 33 4 35 3 39 0.87 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 HI0933_like PF03486.9 409 0.00027 10.5 4.9 2 4 0.0091 0.12 1.7 0.0 142 167 116 140 104 142 0.81 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 HI0933_like PF03486.9 409 0.00027 10.5 4.9 3 4 0.0015 0.02 4.3 0.5 2 34 165 197 164 203 0.88 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 HI0933_like PF03486.9 409 0.00027 10.5 4.9 4 4 0.006 0.08 2.3 0.0 113 163 208 258 202 263 0.82 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_1 - 122 FAD_binding_2 PF00890.19 417 2e-10 31.0 1.2 1 2 1.3e-10 1.2e-09 28.5 0.4 1 32 5 36 5 44 0.91 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 FAD_binding_2 PF00890.19 417 2e-10 31.0 1.2 2 2 0.02 0.18 1.5 0.0 173 203 80 114 51 120 0.64 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_18 - 232 FAD_binding_2 PF00890.19 417 8.9e-08 22.3 0.0 1 2 1.6e-05 0.00014 11.8 0.0 146 204 100 159 94 174 0.87 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_18 - 232 FAD_binding_2 PF00890.19 417 8.9e-08 22.3 0.0 2 2 0.00036 0.0033 7.3 0.0 376 402 175 195 168 207 0.85 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_15 - 444 FAD_binding_2 PF00890.19 417 1.3e-05 15.2 1.2 1 2 0.0011 0.0095 5.8 0.0 1 32 4 35 4 40 0.93 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 FAD_binding_2 PF00890.19 417 1.3e-05 15.2 1.2 2 2 0.00048 0.0043 6.9 0.6 2 32 166 196 165 222 0.77 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_1 - 122 Thi4 PF01946.12 230 1.2e-09 28.6 0.9 1 2 3.3e-10 4.4e-09 26.8 0.1 17 50 3 36 1 43 0.89 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 Thi4 PF01946.12 230 1.2e-09 28.6 0.9 2 2 0.037 0.49 0.4 0.1 128 164 75 113 66 118 0.71 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_15 - 444 Thi4 PF01946.12 230 3.1e-05 14.2 0.0 1 2 0.0089 0.12 2.4 0.0 17 53 2 37 1 65 0.80 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 Thi4 PF01946.12 230 3.1e-05 14.2 0.0 2 2 7.1e-05 0.00096 9.3 0.0 18 49 164 195 151 239 0.88 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 Pyr_redox_3 PF13738.1 203 4.7e-18 57.0 0.1 1 2 5.4e-14 4.9e-13 40.6 0.0 1 199 6 195 6 197 0.73 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 Pyr_redox_3 PF13738.1 203 4.7e-18 57.0 0.1 2 2 1.3e-05 0.00012 13.3 0.0 84 148 207 273 202 317 0.80 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_18 - 232 Pyr_redox_3 PF13738.1 203 3.9e-13 40.9 0.2 1 2 2.8e-13 2.5e-12 38.3 0.0 117 200 11 93 1 96 0.87 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_18 - 232 Pyr_redox_3 PF13738.1 203 3.9e-13 40.9 0.2 2 2 0.082 0.74 0.8 0.0 93 147 107 165 97 216 0.68 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_1 - 122 Pyr_redox_3 PF13738.1 203 7.6e-11 33.5 2.2 1 2 5.2e-09 4.7e-08 24.3 0.4 1 41 7 45 7 63 0.84 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 Pyr_redox_3 PF13738.1 203 7.6e-11 33.5 2.2 2 2 0.00021 0.0019 9.3 0.0 96 147 73 121 55 122 0.71 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 2_7 - 159 GCD14 PF08704.5 247 0.00026 11.6 1.8 1 1 1.2e-05 0.00034 11.2 1.8 161 229 73 142 60 157 0.67 # 4870 # 5346 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.323 1_15 - 444 NAD_binding_2 PF03446.10 163 1.3e-05 16.1 0.1 1 1 1e-06 2.8e-05 15.1 0.1 2 49 164 211 163 257 0.81 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 NAD_Gly3P_dh_N PF01210.18 157 2.8e-06 18.2 0.0 1 1 2e-07 5.4e-06 17.3 0.0 1 63 165 234 165 240 0.71 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 2-Hacid_dh_C PF02826.14 178 2.1e-06 18.0 0.0 1 1 1.6e-07 4.4e-06 17.0 0.0 35 78 162 205 147 232 0.81 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 ApbA PF02558.11 151 4.3e-07 20.6 0.2 1 2 1.1e-07 2.9e-06 17.9 0.1 1 35 166 201 166 245 0.88 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 ApbA PF02558.11 151 4.3e-07 20.6 0.2 2 2 0.043 1.2 -0.3 0.0 35 94 344 408 330 415 0.72 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_1 - 122 Lycopene_cycl PF05834.7 374 1.1e-09 28.6 1.2 1 2 5.4e-07 1.4e-05 15.1 0.6 1 33 5 35 5 43 0.91 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 Lycopene_cycl PF05834.7 374 1.1e-09 28.6 1.2 2 2 3e-06 8.1e-05 12.6 0.0 77 142 49 114 36 120 0.83 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_15 - 444 K_oxygenase PF13434.1 341 9.9e-07 18.9 0.0 1 2 2.5e-07 3.4e-06 17.2 0.0 139 239 119 210 102 216 0.77 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 K_oxygenase PF13434.1 341 9.9e-07 18.9 0.0 2 2 0.075 1 -0.8 0.0 280 321 203 246 192 258 0.64 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_18 - 232 K_oxygenase PF13434.1 341 6.2e-06 16.3 0.7 1 2 7e-05 0.00095 9.1 0.2 187 228 57 96 2 100 0.61 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_18 - 232 K_oxygenase PF13434.1 341 6.2e-06 16.3 0.7 2 2 0.00076 0.01 5.7 0.0 286 335 98 152 92 157 0.81 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_15 - 444 UDPG_MGDP_dh_N PF03721.9 185 1.7e-07 21.9 0.5 1 2 1.8e-08 4.9e-07 20.3 0.1 2 29 165 192 164 215 0.92 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 UDPG_MGDP_dh_N PF03721.9 185 1.7e-07 21.9 0.5 2 2 0.096 2.6 -1.6 0.0 17 41 386 410 383 426 0.84 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 NAD_binding_10 PF13460.1 183 3.2e-06 18.3 0.0 1 1 2.4e-07 6.5e-06 17.3 0.0 1 38 166 204 166 218 0.86 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_1 - 122 FAD_oxidored PF12831.2 428 1.2e-09 28.7 2.6 1 2 4.5e-11 1.2e-09 28.7 2.6 1 38 5 41 5 58 0.92 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 FAD_oxidored PF12831.2 428 1.2e-09 28.7 2.6 2 2 0.0059 0.16 1.9 0.1 87 147 57 111 39 113 0.74 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 DAO PF01266.19 358 2.4e-16 50.5 0.5 1 2 6.4e-10 5.7e-09 26.3 0.2 1 35 5 39 5 44 0.93 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 DAO PF01266.19 358 2.4e-16 50.5 0.5 2 2 6.7e-09 6e-08 22.9 0.0 150 206 62 117 49 120 0.87 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_15 - 444 DAO PF01266.19 358 6.5e-10 29.4 6.3 1 4 0.0081 0.073 2.9 0.0 1 35 4 38 4 67 0.80 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 DAO PF01266.19 358 6.5e-10 29.4 6.3 2 4 0.036 0.33 0.8 0.0 149 200 91 136 76 140 0.77 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 DAO PF01266.19 358 6.5e-10 29.4 6.3 3 4 2.4e-06 2.1e-05 14.5 0.6 2 31 166 195 165 201 0.91 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 DAO PF01266.19 358 6.5e-10 29.4 6.3 4 4 1.8e-05 0.00016 11.6 0.1 152 200 209 258 203 413 0.92 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_18 - 232 DAO PF01266.19 358 5.4e-05 13.2 0.6 1 2 0.00065 0.0059 6.5 0.1 175 207 3 35 1 97 0.81 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_18 - 232 DAO PF01266.19 358 5.4e-05 13.2 0.6 2 2 0.0017 0.015 5.1 0.1 156 201 104 150 88 155 0.80 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_1 - 122 NAD_binding_9 PF13454.1 156 9.2e-08 23.1 1.2 1 2 0.00013 0.0017 9.2 0.1 1 46 7 46 7 50 0.79 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_1 - 122 NAD_binding_9 PF13454.1 156 9.2e-08 23.1 1.2 2 2 7.8e-06 0.00011 13.1 0.2 115 155 72 112 63 113 0.89 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_15 - 444 NAD_binding_9 PF13454.1 156 1.3e-06 19.3 1.6 1 3 0.045 0.61 0.9 0.0 2 48 7 47 6 65 0.70 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 NAD_binding_9 PF13454.1 156 1.3e-06 19.3 1.6 2 3 0.068 0.91 0.3 0.0 135 155 117 137 87 138 0.80 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 NAD_binding_9 PF13454.1 156 1.3e-06 19.3 1.6 3 3 3.9e-06 5.3e-05 14.1 0.0 100 154 203 258 195 260 0.89 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 Pyr_redox PF00070.22 80 4.3e-20 63.1 0.3 1 1 3.7e-20 3.3e-19 60.2 0.2 1 75 165 238 165 245 0.84 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_18 - 232 Pyr_redox PF00070.22 80 7.5e-16 49.5 0.1 1 1 1.6e-16 1.4e-15 48.6 0.1 2 78 63 135 62 142 0.94 # 10627 # 11322 # -1 # ID=1_18;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 1_1 - 122 Pyr_redox PF00070.22 80 9.6e-05 13.9 0.7 1 1 2.8e-05 0.00026 12.5 0.7 2 31 6 35 5 100 0.95 # 3 # 368 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_15 - 444 TrkA_N PF02254.13 116 5.3e-05 14.3 0.1 1 3 0.056 1.5 -0.1 0.0 1 31 5 35 5 36 0.83 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 TrkA_N PF02254.13 116 5.3e-05 14.3 0.1 2 3 5.5e-05 0.0015 9.6 0.0 1 38 166 203 166 215 0.82 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_15 - 444 TrkA_N PF02254.13 116 5.3e-05 14.3 0.1 3 3 0.074 2 -0.4 0.0 4 36 395 426 393 437 0.80 # 8468 # 9799 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/23d9e479-56aa-4f4c-95f4-24bdccfe0c30 # Target file: checkm_output/bins/pGCA_001617525.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001617525.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/23d9e479-56aa-4f4c-95f4-24bdccfe0c30 checkm_output/bins/pGCA_001617525.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:44:47 2020 # [ok]