# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_32 - 290 Methyltransf_12 PF08242.7 99 3.4e-08 26.3 0.0 1 1 3.5e-09 1.2e-07 24.6 0.0 1 72 120 187 120 207 0.85 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_11 - 275 Methyltransf_12 PF08242.7 99 0.00043 13.2 0.1 1 1 3.8e-05 0.0013 11.6 0.0 6 59 133 190 129 219 0.78 # 10095 # 10919 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_32 - 290 UPF0020 PF01170.13 180 1.2e-06 20.5 0.0 1 1 6.3e-08 2.2e-06 19.7 0.0 37 120 124 195 107 207 0.82 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_11 - 275 UPF0020 PF01170.13 180 8.4e-06 17.8 0.1 1 1 6.1e-07 2.1e-05 16.5 0.0 21 117 116 205 100 222 0.78 # 10095 # 10919 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_47 - 370 Saccharop_dh PF03435.13 386 5.3e-05 14.7 0.1 1 1 2.2e-06 0.00015 13.1 0.0 1 76 170 240 170 247 0.83 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_39 - 609 ABC_ATPase PF09818.4 448 4.3e-05 14.6 1.6 1 2 0.0019 0.13 3.1 0.1 246 278 395 430 390 439 0.80 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_39 - 609 ABC_ATPase PF09818.4 448 4.3e-05 14.6 1.6 2 2 1.1e-05 0.00074 10.5 0.2 302 355 482 536 467 578 0.78 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_32 - 290 Methyltransf_18 PF12847.2 112 2.8e-12 39.6 0.0 1 1 2.9e-13 6.8e-12 38.4 0.0 3 108 117 241 115 245 0.68 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_11 - 275 Methyltransf_18 PF12847.2 112 0.00011 15.2 0.0 1 1 1.4e-05 0.00033 13.6 0.0 5 105 127 243 123 247 0.63 # 10095 # 10919 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_47 - 370 Methyltransf_18 PF12847.2 112 0.00035 13.6 0.0 1 1 3.3e-05 0.00077 12.5 0.0 9 71 174 265 166 291 0.63 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_47 - 370 KH_5 PF13184.1 69 0.00017 13.8 0.2 1 1 5.8e-06 0.0004 12.6 0.2 21 57 194 231 186 242 0.84 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_40 - 587 DUF87 PF01935.12 229 2.6e-05 16.5 0.1 1 1 8.5e-07 5.9e-05 15.3 0.1 26 43 364 381 355 385 0.90 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_21 - 476 NB-ARC PF00931.17 287 0.00035 11.8 1.1 1 2 1.3e-05 0.00087 10.5 0.2 22 60 149 186 136 203 0.80 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_21 - 476 NB-ARC PF00931.17 287 0.00035 11.8 1.1 2 2 0.04 2.8 -1.0 0.0 51 100 361 407 350 410 0.65 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_39 - 609 AAA_22 PF13401.1 131 2e-07 23.6 0.2 1 1 8.1e-08 1.4e-06 20.9 0.2 3 106 392 540 389 562 0.61 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_34 - 196 AAA_22 PF13401.1 131 3.9e-07 22.7 0.1 1 1 3.9e-08 6.8e-07 21.9 0.1 10 126 8 117 2 122 0.79 # 30271 # 30858 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_8 - 499 AAA_22 PF13401.1 131 0.0001 14.8 2.1 1 1 1.7e-05 0.0003 13.3 1.1 52 115 107 171 44 191 0.75 # 6564 # 8060 # -1 # ID=1_8;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_21 - 476 AAA_22 PF13401.1 131 0.00011 14.8 0.0 1 1 3e-05 0.00051 12.6 0.0 9 100 151 253 145 271 0.67 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_32 - 290 Methyltransf_11 PF08241.7 95 1.1e-05 18.3 0.0 1 1 4.7e-07 3.2e-05 16.8 0.0 1 64 120 185 120 214 0.84 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_39 - 609 SRP54 PF00448.17 196 5.5e-05 15.0 0.2 1 1 2.3e-06 0.00016 13.6 0.0 3 39 395 431 393 446 0.89 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_47 - 370 NAD_binding_7 PF13241.1 103 4.9e-06 19.2 0.6 1 1 2.4e-07 1.7e-05 17.5 0.1 9 67 169 238 164 267 0.82 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_39 - 609 AAA_17 PF13207.1 121 1.6e-07 24.5 0.1 1 1 1.2e-08 4.1e-07 23.2 0.1 2 35 396 429 395 523 0.72 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_40 - 587 AAA_17 PF13207.1 121 0.00025 14.3 0.0 1 1 2e-05 0.00068 12.9 0.0 3 32 365 391 363 457 0.77 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_39 - 609 AAA_21 PF13304.1 303 1.2e-09 30.9 0.1 1 1 1.1e-08 3.8e-07 22.7 0.0 2 287 396 551 395 560 0.86 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_40 - 587 AAA_21 PF13304.1 303 0.00038 12.8 0.2 1 1 5.9e-05 0.002 10.4 0.1 3 63 365 435 363 456 0.80 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_21 - 476 MobB PF03205.9 140 1.5e-05 17.1 0.3 1 2 0.00013 0.0044 9.1 0.1 6 52 152 194 148 214 0.78 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_21 - 476 MobB PF03205.9 140 1.5e-05 17.1 0.3 2 2 0.0042 0.15 4.2 0.0 75 126 359 409 344 423 0.74 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_39 - 609 MobB PF03205.9 140 0.00029 13.0 0.0 1 1 1.8e-05 0.00063 11.8 0.0 2 22 395 415 394 426 0.83 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_8 - 499 Helicase_C PF00271.26 78 8.3e-31 98.2 0.1 1 1 3.3e-32 2.3e-30 96.8 0.1 3 78 259 334 257 334 0.97 # 6564 # 8060 # -1 # ID=1_8;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_40 - 587 T2SE PF00437.15 272 1.6e-05 16.3 0.0 1 1 1e-06 3.6e-05 15.1 0.0 99 149 333 382 296 429 0.76 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_39 - 609 T2SE PF00437.15 272 9.6e-05 13.7 0.0 1 1 6.4e-06 0.00022 12.5 0.0 103 148 369 413 360 425 0.79 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_9 - 460 Mur_ligase PF01225.20 83 3.2e-16 51.6 0.0 1 1 1.9e-17 1.3e-15 49.7 0.0 1 82 25 98 25 99 0.97 # 8127 # 9506 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_47 - 370 Shikimate_DH PF01488.15 135 2.4e-08 26.6 0.2 1 1 7.5e-10 5.2e-08 25.5 0.2 14 109 169 268 163 284 0.84 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_39 - 609 Zeta_toxin PF06414.7 201 3.2e-06 18.7 0.0 1 1 1e-07 7.1e-06 17.6 0.0 14 57 391 435 382 572 0.81 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_47 - 370 F420_oxidored PF03807.12 96 9.4e-05 15.2 1.4 1 1 2.2e-06 0.00015 14.6 0.2 2 66 170 236 169 269 0.69 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_39 - 609 SMC_N PF02463.14 220 1.9e-08 26.2 0.7 1 2 0.00018 0.0063 8.1 0.0 12 42 376 411 365 417 0.69 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_39 - 609 SMC_N PF02463.14 220 1.9e-08 26.2 0.7 2 2 6.2e-07 2.2e-05 16.2 0.2 135 213 497 576 413 581 0.74 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_40 - 587 SMC_N PF02463.14 220 2.7e-08 25.6 1.3 1 2 0.0021 0.073 4.6 0.4 26 44 363 381 353 393 0.83 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_40 - 587 SMC_N PF02463.14 220 2.7e-08 25.6 1.3 2 2 6.1e-08 2.1e-06 19.5 0.0 110 207 391 537 380 548 0.75 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_32 - 290 Methyltransf_16 PF10294.4 174 2e-09 29.5 0.0 1 1 4.7e-11 3.2e-09 28.8 0.0 44 94 113 162 94 186 0.85 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_21 - 476 Arch_ATPase PF01637.13 234 7.6e-05 14.8 0.0 1 1 2.1e-06 0.00014 14.0 0.0 25 142 151 264 146 280 0.65 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_39 - 609 AAA_16 PF13191.1 185 1e-06 21.2 0.0 1 1 1.4e-07 3.3e-06 19.6 0.0 19 180 388 552 382 559 0.59 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_40 - 587 AAA_16 PF13191.1 185 8.9e-06 18.2 0.7 1 1 7.4e-07 1.7e-05 17.2 0.7 12 175 351 514 345 545 0.64 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_21 - 476 AAA_16 PF13191.1 185 0.00017 14.0 0.1 1 1 2.7e-05 0.00062 12.1 0.0 29 58 151 182 145 197 0.82 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_39 - 609 AAA_23 PF13476.1 202 4.7e-07 22.7 0.1 1 1 2.3e-08 1.6e-06 20.9 0.0 16 38 385 412 367 417 0.78 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_39 - 609 AAA_18 PF13238.1 129 1e-05 18.2 0.0 1 1 4.3e-07 2.9e-05 16.8 0.0 1 43 396 469 396 531 0.70 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_32 - 290 Methyltransf_25 PF13649.1 101 3.8e-08 26.1 0.0 1 1 7.7e-09 2.7e-07 23.4 0.0 1 83 119 194 119 238 0.83 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_11 - 275 Methyltransf_25 PF13649.1 101 1.4e-06 21.0 0.0 1 1 9.4e-08 3.2e-06 19.9 0.0 2 65 128 194 127 241 0.81 # 10095 # 10919 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_23 - 511 KaiC PF06745.8 227 5.4e-08 24.6 0.1 1 1 4.3e-09 1.5e-07 23.1 0.1 2 70 147 212 146 215 0.93 # 20539 # 22071 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.513 1_21 - 476 KaiC PF06745.8 227 6.7e-05 14.4 0.2 1 1 3.4e-06 0.00012 13.6 0.2 2 72 131 202 130 255 0.87 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_39 - 609 AAA_14 PF13173.1 128 5.3e-05 15.5 0.1 1 2 2.3e-05 0.00079 11.7 0.0 2 46 393 437 392 463 0.73 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_39 - 609 AAA_14 PF13173.1 128 5.3e-05 15.5 0.1 2 2 0.066 2.3 0.5 0.0 52 74 516 536 493 593 0.62 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_34 - 196 AAA_14 PF13173.1 128 0.00012 14.4 0.0 1 1 7e-06 0.00024 13.4 0.0 9 96 9 113 4 126 0.62 # 30271 # 30858 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_40 - 587 AAA_29 PF13555.1 62 1.5e-06 20.1 0.0 1 1 1.4e-07 4.7e-06 18.5 0.0 16 41 355 379 350 385 0.80 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_39 - 609 AAA_29 PF13555.1 62 6e-05 15.0 0.0 1 1 4.3e-06 0.00015 13.7 0.0 19 40 390 410 382 413 0.80 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_21 - 476 AAA PF00004.24 132 4.6e-07 22.5 0.1 1 2 5.4e-07 1.8e-05 17.3 0.0 3 74 151 256 149 296 0.83 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_21 - 476 AAA PF00004.24 132 4.6e-07 22.5 0.1 2 2 0.014 0.48 3.0 0.0 32 92 351 408 343 459 0.71 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_39 - 609 AAA PF00004.24 132 2.1e-06 20.4 0.1 1 2 0.00022 0.0075 8.9 0.0 2 52 397 449 396 458 0.77 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_39 - 609 AAA PF00004.24 132 2.1e-06 20.4 0.1 2 2 0.00027 0.0091 8.6 0.1 36 99 498 552 468 577 0.67 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_34 - 196 TK PF00265.13 176 1.1e-50 164.1 0.0 1 1 1.7e-52 1.2e-50 163.9 0.0 2 176 3 184 2 184 0.97 # 30271 # 30858 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 2_11 - 275 Ubie_methyltran PF01209.13 233 0.0007 11.1 0.0 1 1 1.5e-05 0.001 10.6 0.0 39 107 115 186 96 218 0.79 # 10095 # 10919 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_39 - 609 MMR_HSR1 PF01926.18 116 0.00023 13.5 0.0 1 1 1e-05 0.00071 12.0 0.0 2 20 396 414 395 460 0.88 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 2_11 - 275 N6_Mtase PF02384.11 311 1.8e-09 29.4 0.0 1 1 7.7e-11 2.7e-09 28.9 0.0 29 121 102 196 87 235 0.82 # 10095 # 10919 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 2_10 - 74 N6_Mtase PF02384.11 311 2.8e-05 15.7 0.0 1 1 8e-07 2.8e-05 15.7 0.0 206 243 6 43 1 71 0.78 # 9904 # 10125 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.491 1_39 - 609 DUF258 PF03193.11 161 7.8e-07 20.8 0.0 1 1 6.5e-08 1.5e-06 19.9 0.0 19 75 376 433 363 484 0.66 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_40 - 587 DUF258 PF03193.11 161 2.3e-06 19.3 0.0 1 1 1.9e-07 4.3e-06 18.4 0.0 23 68 348 394 335 447 0.88 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_21 - 476 DUF258 PF03193.11 161 3.4e-06 18.7 0.0 1 1 2.7e-07 6.2e-06 17.9 0.0 24 83 135 194 116 207 0.80 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_39 - 609 AAA_33 PF13671.1 143 0.00049 12.4 0.2 1 1 2.4e-05 0.0017 10.7 0.2 1 19 395 413 395 547 0.62 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_32 - 290 Methyltransf_26 PF13659.1 117 1.3e-18 59.6 0.5 1 2 0.046 1.6 1.2 0.1 17 77 9 79 6 112 0.57 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_32 - 290 Methyltransf_26 PF13659.1 117 1.3e-18 59.6 0.5 2 2 3.4e-19 1.2e-17 56.5 0.1 2 111 117 240 116 244 0.87 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_11 - 275 Methyltransf_26 PF13659.1 117 1.6e-13 43.1 0.0 1 1 8e-15 2.7e-13 42.4 0.0 2 114 125 248 124 251 0.80 # 10095 # 10919 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_47 - 370 2-Hacid_dh_C PF02826.14 178 4.6e-05 15.0 0.1 1 1 1.3e-06 9.2e-05 14.0 0.1 33 127 164 268 138 279 0.78 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_11 - 275 FmrO PF07091.6 251 1.6e-05 16.3 0.0 1 1 3.5e-07 2.4e-05 15.8 0.0 52 176 59 199 51 203 0.77 # 10095 # 10919 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_47 - 370 XdhC_C PF13478.1 136 2e-05 17.3 0.0 1 1 5.6e-07 3.9e-05 16.4 0.0 1 39 170 208 170 289 0.79 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_39 - 609 AAA_30 PF13604.1 196 3.8e-07 22.2 0.2 1 1 8.1e-08 5.6e-06 18.4 0.2 17 117 392 545 387 555 0.63 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_32 - 290 TehB PF03848.9 192 9.2e-06 17.3 0.0 1 1 2.4e-07 1.6e-05 16.5 0.0 31 100 116 187 94 190 0.89 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_40 - 587 FtsK_SpoIIIE PF01580.13 205 0.00052 11.9 0.4 1 1 1.7e-05 0.0012 10.7 0.1 39 56 362 379 344 381 0.80 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_32 - 290 MTS PF05175.9 170 2.2e-25 81.4 0.0 1 1 5.3e-27 3.7e-25 80.6 0.0 29 160 113 262 100 267 0.89 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_39 - 609 ABC_tran PF00005.22 137 7.3e-34 109.4 0.0 1 1 9.2e-35 2.1e-33 107.9 0.0 2 137 384 532 383 532 0.88 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_40 - 587 ABC_tran PF00005.22 137 1.7e-33 108.2 0.0 1 1 1.4e-34 3.3e-33 107.3 0.0 1 135 351 497 351 499 0.92 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_21 - 476 ABC_tran PF00005.22 137 0.00067 12.4 0.4 1 1 0.00019 0.0044 9.7 0.1 10 37 145 172 143 225 0.79 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_47 - 370 THF_DHG_CYH_C PF02882.14 161 0.00012 13.5 1.6 1 1 3.8e-06 0.00026 12.5 0.3 62 113 214 277 169 317 0.73 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_21 - 476 ATP-synt_ab PF00006.20 215 9.5e-71 230.0 0.0 1 1 4.3e-72 1.5e-70 229.4 0.0 1 215 132 346 132 346 0.98 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_23 - 511 ATP-synt_ab PF00006.20 215 5.9e-70 227.4 0.0 1 1 3.6e-71 1.2e-69 226.4 0.0 1 215 148 364 148 364 0.99 # 20539 # 22071 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.513 1_32 - 290 Cons_hypoth95 PF03602.10 183 4.2e-08 25.2 0.0 1 1 1e-09 7.2e-08 24.4 0.0 41 127 114 194 102 207 0.82 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_39 - 609 AAA_19 PF13245.1 76 3.7e-06 19.1 0.1 1 1 5.1e-07 1.8e-05 16.9 0.0 6 36 390 418 387 445 0.81 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_40 - 587 AAA_19 PF13245.1 76 7.1e-05 15.0 0.0 1 1 8.5e-06 0.00029 13.0 0.0 12 36 363 386 356 424 0.83 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_47 - 370 NAD_binding_10 PF13460.1 183 4e-05 16.1 0.1 1 2 0.081 5.6 -0.7 0.0 67 105 114 152 98 159 0.78 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_47 - 370 NAD_binding_10 PF13460.1 183 4e-05 16.1 0.1 2 2 2.8e-06 0.00019 13.8 0.0 1 75 170 251 170 273 0.81 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_8 - 499 Helicase_RecD PF05127.9 177 0.00012 14.2 0.0 1 1 3.1e-06 0.00022 13.3 0.0 4 100 45 153 42 184 0.70 # 6564 # 8060 # -1 # ID=1_8;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_39 - 609 AAA_10 PF12846.2 304 0.00016 13.5 0.7 1 2 2.5e-05 0.00085 11.1 0.0 2 32 394 424 393 436 0.87 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_39 - 609 AAA_10 PF12846.2 304 0.00016 13.5 0.7 2 2 0.092 3.2 -0.6 0.1 144 192 513 552 436 588 0.52 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_40 - 587 AAA_10 PF12846.2 304 0.00019 13.3 0.1 1 1 1.2e-05 0.00043 12.1 0.1 3 21 363 381 361 390 0.90 # 36766 # 38526 # -1 # ID=1_40;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.519 1_47 - 370 FAD_oxidored PF12831.2 428 0.00011 13.7 0.2 1 1 2.6e-06 0.00018 13.0 0.2 2 32 170 200 169 201 0.95 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_8 - 499 ResIII PF04851.10 184 3.4e-05 16.1 0.0 1 1 8.7e-07 6e-05 15.3 0.0 31 181 44 183 15 186 0.69 # 6564 # 8060 # -1 # ID=1_8;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_32 - 290 Methyltransf_31 PF13847.1 152 3.5e-15 48.3 0.0 1 1 1.4e-16 4.8e-15 47.8 0.0 3 126 115 260 113 283 0.76 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_11 - 275 Methyltransf_31 PF13847.1 152 4.4e-08 25.2 0.0 1 1 4.1e-09 1.4e-07 23.6 0.0 4 105 124 244 121 272 0.72 # 10095 # 10919 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_33 - 363 TIGR00019 TIGR00019 361 7.9e-166 543.4 11.7 1 1 1.3e-167 8.7e-166 543.2 11.7 5 359 5 360 1 362 0.99 # 29179 # 30267 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_8 - 499 DEAD PF00270.24 169 7.3e-52 167.6 0.4 1 2 9.4e-53 3.2e-51 165.5 0.2 1 168 25 190 25 191 0.95 # 6564 # 8060 # -1 # ID=1_8;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_8 - 499 DEAD PF00270.24 169 7.3e-52 167.6 0.4 2 2 0.097 3.4 -0.5 0.0 67 102 255 296 246 303 0.69 # 6564 # 8060 # -1 # ID=1_8;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_39 - 609 DEAD PF00270.24 169 0.0005 12.0 0.2 1 1 7.7e-05 0.0026 9.6 0.2 14 70 393 540 384 591 0.61 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_32 - 290 PrmA PF06325.8 295 9.7e-10 30.3 0.0 1 1 2.3e-11 1.6e-09 29.6 0.0 162 232 116 188 100 189 0.83 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 370 Pyr_redox PF00070.22 80 2.5e-05 17.1 0.3 1 1 1.8e-06 0.00012 14.8 0.1 1 46 169 215 169 226 0.86 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_32 - 290 Methyltransf_10 PF05971.7 299 9.1e-08 23.9 0.0 1 1 2.4e-09 1.6e-07 23.0 0.0 93 194 107 198 89 205 0.82 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_6 - 259 Sigma54_activ_2 PF14532.1 138 0.00045 12.7 0.0 1 1 1.9e-05 0.0013 11.2 0.0 12 68 80 135 74 150 0.89 # 6592 # 7368 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.484 1_32 - 290 Methyltransf_23 PF13489.1 161 4.7e-07 22.0 0.0 1 1 6.6e-08 4.6e-06 18.8 0.0 19 116 112 245 95 269 0.59 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_21 - 476 RNA_helicase PF00910.17 107 0.00039 13.0 0.0 1 1 2e-05 0.0014 11.2 0.0 3 26 151 174 149 206 0.73 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_32 - 290 GidB PF02527.10 184 7.9e-08 24.0 0.0 1 2 5.2e-09 3.6e-07 21.9 0.0 35 117 103 183 86 187 0.71 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_32 - 290 GidB PF02527.10 184 7.9e-08 24.0 0.0 2 2 0.037 2.6 -0.5 0.0 127 166 223 262 218 276 0.81 # 28317 # 29186 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 370 TrkA_N PF02254.13 116 2.5e-07 23.1 0.5 1 1 1.1e-08 7.5e-07 21.6 0.2 1 70 170 239 170 244 0.86 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_47 - 370 AlaDh_PNT_C PF01262.16 168 3.8e-45 145.8 0.4 1 1 1.1e-46 7.6e-45 144.8 0.4 2 168 149 298 148 298 0.94 # 44947 # 46056 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_21 - 476 NACHT PF05729.7 166 2.6e-05 16.3 0.1 1 1 1.1e-06 7.4e-05 14.8 0.1 6 28 152 174 149 192 0.88 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_21 - 476 AAA_25 PF13481.1 194 1.1e-06 20.6 0.0 1 1 3.6e-08 2.5e-06 19.4 0.0 28 156 142 254 120 266 0.64 # 18101 # 19528 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.493 1_8 - 499 SNF2_N PF00176.18 299 1e-05 16.8 0.0 1 1 2.3e-07 1.6e-05 16.2 0.0 33 146 46 155 27 186 0.83 # 6564 # 8060 # -1 # ID=1_8;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_39 - 609 AAA_28 PF13521.1 163 3.3e-05 16.3 0.3 1 1 2.3e-06 0.00016 14.0 0.1 2 60 396 458 395 486 0.69 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_39 - 609 AAA_5 PF07728.9 139 0.00011 14.4 0.2 1 1 9.9e-06 0.00068 11.8 0.2 3 64 397 462 395 590 0.74 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_39 - 609 APS_kinase PF01583.15 157 9.3e-05 14.5 0.1 1 1 4.2e-06 0.00029 12.9 0.0 4 49 395 439 392 451 0.80 # 34965 # 36791 # -1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/ab54ed3d-48a7-422f-bfd6-02ba85d5ab1f # Target file: checkm_output/bins/pGCA_001602195.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001602195.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ab54ed3d-48a7-422f-bfd6-02ba85d5ab1f checkm_output/bins/pGCA_001602195.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:44:39 2020 # [ok]