# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_67 - 254 Mg_chelatase PF01078.16 207 0.0013 11.6 0.0 1 1 1.1e-05 0.002 11.1 0.0 19 42 95 118 79 155 0.71 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 2_49 - 66 Ras_bdg_2 PF14847.1 105 9.9e-05 16.1 0.1 1 1 5.9e-07 0.00011 15.9 0.1 14 63 13 59 10 65 0.84 # 45708 # 45905 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 1_67 - 254 IstB_IS21 PF01695.12 178 8.2e-62 201.5 0.0 1 1 1.3e-63 1.2e-61 201.0 0.0 4 176 55 227 52 229 0.98 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 2_21 - 657 IstB_IS21 PF01695.12 178 0.0012 12.0 0.0 1 1 4.6e-05 0.0043 10.2 0.0 32 63 243 278 207 296 0.81 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_59 - 512 GIDA PF01134.17 392 4.6e-12 39.2 10.3 1 3 2.6e-09 4.9e-07 22.7 1.1 1 31 212 242 212 259 0.87 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 GIDA PF01134.17 392 4.6e-12 39.2 10.3 2 3 8.3e-05 0.016 7.8 0.0 116 151 286 319 267 338 0.76 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 GIDA PF01134.17 392 4.6e-12 39.2 10.3 3 3 3.9e-06 0.00074 12.2 1.6 1 27 351 377 351 392 0.82 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 Pyr_redox_2 PF07992.9 201 1.4e-33 110.3 0.0 1 1 1.8e-35 3.3e-33 109.0 0.0 1 199 212 485 212 487 0.87 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 2_21 - 657 DUF87 PF01935.12 229 9.1e-12 39.0 0.7 1 1 4.9e-14 9.1e-12 39.0 0.7 15 161 254 394 246 467 0.75 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_76 - 274 NB-ARC PF00931.17 287 0.0011 11.6 0.7 1 1 1.2e-05 0.0022 10.6 0.6 2 40 22 60 21 188 0.88 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_77 - 276 AAA_22 PF13401.1 131 1.4e-05 19.0 0.6 1 1 4.8e-06 0.00015 15.7 0.6 5 68 39 149 33 221 0.51 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 2_21 - 657 AAA_22 PF13401.1 131 0.0001 16.2 0.0 1 2 0.00021 0.0065 10.4 0.0 6 23 264 281 258 365 0.80 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 2_21 - 657 AAA_22 PF13401.1 131 0.0001 16.2 0.0 2 2 0.055 1.7 2.6 0.0 88 110 493 518 478 541 0.70 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_67 - 254 AAA_22 PF13401.1 131 0.00017 15.6 0.0 1 2 0.00027 0.0084 10.1 0.0 8 27 102 121 95 152 0.79 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 AAA_22 PF13401.1 131 0.00017 15.6 0.0 2 2 0.039 1.2 3.1 0.0 77 105 148 176 126 185 0.69 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 3_9 - 76 AAA_22 PF13401.1 131 0.00064 13.7 0.0 1 1 2.1e-05 0.00064 13.7 0.0 3 31 3 31 1 74 0.73 # 3954 # 4181 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_32 - 735 AAA_22 PF13401.1 131 0.0013 12.7 1.6 1 1 0.00016 0.005 10.8 0.3 7 113 398 545 392 560 0.68 # 26905 # 29109 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.427 1_76 - 274 AAA_22 PF13401.1 131 0.0019 12.1 1.6 1 1 0.00032 0.0099 9.8 1.6 4 111 39 198 36 216 0.58 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_50 - 123 Rad60-SLD PF11976.3 72 0.00096 12.7 0.0 1 1 8.8e-06 0.0017 11.9 0.0 3 53 47 98 46 106 0.86 # 45722 # 46090 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.369 1_38 - 377 DNA_methylase PF00145.12 335 1.2e-75 248.5 0.0 1 1 1.5e-77 1.4e-75 248.2 0.0 2 334 5 372 4 373 0.76 # 35534 # 36664 # 1 # ID=1_38;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.351 1_39 - 436 DNA_methylase PF00145.12 335 1e-38 127.1 0.4 1 1 1.6e-40 1.5e-38 126.5 0.4 5 333 7 413 4 415 0.71 # 36683 # 37990 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 1_59 - 512 Trp_halogenase PF04820.9 454 0.04 6.3 6.3 1 2 0.00044 0.083 5.2 1.2 1 22 212 233 212 241 0.87 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 Trp_halogenase PF04820.9 454 0.04 6.3 6.3 2 2 0.0014 0.27 3.5 0.3 1 32 351 379 351 382 0.84 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_77 - 276 AAA_15 PF13175.1 415 0.00025 14.0 0.4 1 2 0.0074 1.4 1.6 0.1 18 42 33 62 17 145 0.75 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_77 - 276 AAA_15 PF13175.1 415 0.00025 14.0 0.4 2 2 1.5e-05 0.0028 10.5 0.0 372 411 179 218 169 222 0.90 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_59 - 512 NAD_binding_7 PF13241.1 103 4.8e-06 20.6 0.7 1 2 4e-05 0.0075 10.4 0.1 8 45 211 266 205 325 0.61 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 NAD_binding_7 PF13241.1 103 4.8e-06 20.6 0.7 2 2 0.00015 0.029 8.5 0.1 5 37 347 379 346 440 0.79 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 2_21 - 657 AAA_17 PF13207.1 121 0.0032 12.1 1.7 1 1 9.7e-05 0.018 9.7 1.7 3 16 266 279 264 433 0.85 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 4_13 - 110 AAA_21 PF13304.1 303 2.5e-10 34.5 0.0 1 1 6e-12 2.8e-10 34.4 0.0 227 297 7 74 1 79 0.91 # 10302 # 10631 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.336 1_77 - 276 AAA_21 PF13304.1 303 4.1e-07 24.0 1.0 1 1 2.3e-07 1.1e-05 19.3 1.0 125 302 91 222 40 223 0.66 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_76 - 274 AAA_21 PF13304.1 303 3.7e-05 17.6 5.0 1 2 0.00029 0.014 9.1 0.3 3 24 43 64 41 123 0.75 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_76 - 274 AAA_21 PF13304.1 303 3.7e-05 17.6 5.0 2 2 9e-05 0.0042 10.8 1.0 220 298 136 212 69 215 0.76 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 3_9 - 76 AAA_21 PF13304.1 303 0.00083 13.1 0.4 1 1 2.1e-05 0.00098 12.9 0.4 2 31 7 38 6 74 0.61 # 3954 # 4181 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_21 - 657 Miro PF08477.8 119 0.0042 11.4 1.7 1 1 8.4e-05 0.016 9.5 0.5 2 20 265 283 264 365 0.84 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_67 - 254 PhoH PF02562.11 205 1.4e-06 21.4 0.0 1 1 1.3e-08 2.4e-06 20.7 0.0 12 82 91 160 80 192 0.76 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_77 - 276 T2SE PF00437.15 272 9.3e-05 15.2 0.3 1 1 8.7e-07 0.00016 14.4 0.3 94 168 1 75 1 104 0.77 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_59 - 512 NAD_binding_8 PF13450.1 68 7.6e-06 19.7 2.9 1 2 2e-06 0.00037 14.3 0.5 1 34 215 246 215 263 0.88 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 NAD_binding_8 PF13450.1 68 7.6e-06 19.7 2.9 2 2 0.0016 0.29 5.1 0.1 1 26 354 379 354 384 0.92 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 FAD_binding_3 PF01494.14 356 1.4e-07 24.6 1.7 1 2 2.7e-08 5e-06 19.5 0.4 2 31 211 240 210 250 0.90 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 FAD_binding_3 PF01494.14 356 1.4e-07 24.6 1.7 2 2 0.0016 0.3 3.8 0.0 3 29 351 376 350 429 0.84 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_77 - 276 SMC_N PF02463.14 220 4.6e-06 19.8 0.6 1 2 1.9e-07 1.8e-05 17.8 0.4 26 213 40 233 25 240 0.69 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_77 - 276 SMC_N PF02463.14 220 4.6e-06 19.8 0.6 2 2 0.025 2.4 1.1 0.0 61 90 226 254 223 267 0.80 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_76 - 274 SMC_N PF02463.14 220 0.00014 14.9 1.7 1 1 4.6e-06 0.00044 13.3 1.7 116 209 125 223 27 232 0.65 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_76 - 274 AAA_16 PF13191.1 185 1.3e-05 19.0 0.6 1 1 6e-07 2.2e-05 18.3 0.6 3 176 19 197 17 209 0.61 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 2_21 - 657 AAA_16 PF13191.1 185 0.00043 14.1 0.1 1 1 0.00012 0.0043 10.8 0.1 24 45 262 284 251 522 0.59 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 3_9 - 76 AAA_16 PF13191.1 185 0.0005 13.9 0.0 1 1 1.4e-05 0.00054 13.8 0.0 24 63 4 54 2 75 0.64 # 3954 # 4181 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_77 - 276 AAA_16 PF13191.1 185 0.00052 13.8 0.2 1 1 2.9e-05 0.0011 12.7 0.2 26 52 40 70 27 219 0.77 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_67 - 254 AAA_16 PF13191.1 185 0.00084 13.1 0.0 1 1 6.3e-05 0.0024 11.7 0.0 24 53 98 129 84 170 0.72 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 3_9 - 76 AAA_23 PF13476.1 202 0.00058 14.0 0.9 1 1 4.1e-06 0.00077 13.6 0.4 21 36 6 21 2 22 0.86 # 3954 # 4181 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_22 - 234 AAA_13 PF13166.1 712 2.2e-05 16.8 11.9 1 1 2.8e-07 2.6e-05 16.6 11.9 377 482 79 181 35 199 0.63 # 20573 # 21274 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.308 1_76 - 274 AAA_13 PF13166.1 712 0.00073 11.8 0.1 1 2 0.0025 0.24 3.5 0.0 23 45 46 68 44 113 0.66 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_76 - 274 AAA_13 PF13166.1 712 0.00073 11.8 0.1 2 2 0.00037 0.035 6.3 0.1 527 573 170 215 158 248 0.83 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_67 - 254 KaiC PF06745.8 227 1.2e-06 21.6 0.0 1 1 1.2e-08 2.2e-06 20.7 0.0 16 65 95 143 69 168 0.85 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 AAA_14 PF13173.1 128 6.3e-06 19.9 0.1 1 1 4.8e-07 3e-05 17.7 0.0 3 100 99 202 97 208 0.67 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 2_21 - 657 AAA_14 PF13173.1 128 3.4e-05 17.6 0.5 1 2 0.0014 0.09 6.5 0.0 3 27 263 287 261 368 0.73 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 2_21 - 657 AAA_14 PF13173.1 128 3.4e-05 17.6 0.5 2 2 0.00042 0.026 8.2 0.1 30 93 456 526 438 539 0.67 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_69 - 288 AAA_14 PF13173.1 128 0.0011 12.7 0.0 1 2 0.03 1.9 2.2 0.0 28 72 39 83 20 85 0.61 # 66102 # 66965 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.385 1_69 - 288 AAA_14 PF13173.1 128 0.0011 12.7 0.0 2 2 0.0006 0.037 7.7 0.0 14 44 88 119 86 156 0.77 # 66102 # 66965 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.385 2_21 - 657 tRNA-synt_1d PF00750.14 354 0.00066 12.3 2.0 1 2 0.0025 0.47 2.9 0.1 95 188 91 184 75 190 0.89 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 2_21 - 657 tRNA-synt_1d PF00750.14 354 0.00066 12.3 2.0 2 2 5.3e-05 0.01 8.4 0.2 96 204 297 404 280 416 0.83 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_59 - 512 HI0933_like PF03486.9 409 4.3e-10 32.3 8.5 1 3 1.4e-06 0.00026 13.3 1.1 1 28 211 238 211 244 0.89 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 HI0933_like PF03486.9 409 4.3e-10 32.3 8.5 2 3 3.9e-05 0.0073 8.5 0.0 110 164 266 318 259 328 0.87 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 HI0933_like PF03486.9 409 4.3e-10 32.3 8.5 3 3 1.1e-06 0.00021 13.6 0.3 2 34 351 383 350 387 0.92 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 2_21 - 657 AAA_29 PF13555.1 62 0.00018 14.8 0.0 1 1 8.8e-06 0.00041 13.7 0.0 23 40 262 279 253 288 0.80 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 3_9 - 76 AAA_29 PF13555.1 62 0.00022 14.6 0.3 1 1 7.9e-06 0.00037 13.8 0.3 22 40 3 21 1 22 0.87 # 3954 # 4181 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_76 - 274 AAA_29 PF13555.1 62 0.00064 13.1 0.2 1 1 2.6e-05 0.0012 12.2 0.2 19 39 36 55 28 72 0.81 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_77 - 276 AAA_29 PF13555.1 62 0.0015 11.9 0.8 1 1 7.8e-05 0.0036 10.7 0.2 17 38 33 53 26 69 0.78 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_59 - 512 FAD_binding_2 PF00890.19 417 1e-12 41.3 13.1 1 5 0.049 9.2 -1.3 0.0 62 99 105 143 92 183 0.78 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 FAD_binding_2 PF00890.19 417 1e-12 41.3 13.1 2 5 7.5e-08 1.4e-05 17.8 4.1 1 30 212 241 212 248 0.91 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 FAD_binding_2 PF00890.19 417 1e-12 41.3 13.1 3 5 7.1e-05 0.013 8.0 0.0 135 224 259 341 240 346 0.74 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 FAD_binding_2 PF00890.19 417 1e-12 41.3 13.1 4 5 9.4e-06 0.0018 10.9 0.3 1 33 351 383 351 387 0.91 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 FAD_binding_2 PF00890.19 417 1e-12 41.3 13.1 5 5 0.0002 0.038 6.5 0.0 376 406 463 487 457 497 0.85 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_67 - 254 AAA PF00004.24 132 1.8e-08 28.5 0.0 1 2 0.0086 0.81 3.7 0.0 38 94 13 60 3 71 0.76 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 AAA PF00004.24 132 1.8e-08 28.5 0.0 2 2 1.2e-08 1.1e-06 22.7 0.0 2 68 102 169 101 200 0.83 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_32 - 735 AAA PF00004.24 132 1.2e-06 22.6 1.5 1 1 3.4e-07 3.2e-05 17.9 1.5 3 127 400 600 398 605 0.74 # 26905 # 29109 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.427 1_67 - 254 Bac_DnaA PF00308.13 219 2.6e-09 30.8 0.0 1 1 2.1e-11 4e-09 30.2 0.0 38 139 102 200 71 207 0.88 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_59 - 512 Thi4 PF01946.12 230 2.3e-08 27.2 0.8 1 2 9.6e-08 1.8e-05 17.7 0.0 14 49 207 242 198 280 0.83 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 Thi4 PF01946.12 230 2.3e-08 27.2 0.8 2 2 0.00013 0.025 7.4 0.1 18 47 350 379 346 382 0.87 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 2_47 - 187 CobU PF02283.11 167 0.00096 12.4 0.1 1 1 6.7e-06 0.0013 12.0 0.1 36 120 58 137 35 147 0.80 # 44594 # 45154 # -1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.378 1_59 - 512 Pyr_redox_3 PF13738.1 203 4.5e-14 46.7 1.2 1 2 0.00027 0.051 7.4 1.1 1 29 214 242 214 251 0.86 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 Pyr_redox_3 PF13738.1 203 4.5e-14 46.7 1.2 2 2 2.3e-13 4.2e-11 37.0 0.0 74 195 257 377 246 382 0.80 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_76 - 274 MMR_HSR1 PF01926.18 116 0.0016 12.2 0.3 1 2 3.6e-05 0.0068 10.2 0.2 3 59 43 143 41 204 0.50 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_76 - 274 MMR_HSR1 PF01926.18 116 0.0016 12.2 0.3 2 2 0.096 18 -0.8 0.0 30 60 206 228 189 244 0.68 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_76 - 274 DUF258 PF03193.11 161 7.6e-05 15.7 0.1 1 1 2e-06 0.00013 15.0 0.1 8 64 10 68 3 87 0.76 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 2_21 - 657 DUF258 PF03193.11 161 0.00029 13.8 0.1 1 1 9.7e-06 0.00061 12.8 0.1 34 52 261 279 236 292 0.76 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_77 - 276 DUF258 PF03193.11 161 0.0009 12.2 0.5 1 1 2.3e-05 0.0014 11.6 0.5 22 67 24 70 3 82 0.74 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 2_16 - 530 TraG-D_C PF12696.2 128 1.3e-43 141.8 0.1 1 1 1.5e-45 2.9e-43 140.6 0.1 1 127 288 411 288 412 0.91 # 12079 # 13668 # -1 # ID=2_16;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 1_67 - 254 AAA_31 PF13614.1 157 0.0013 12.5 0.2 1 2 0.0017 0.32 4.7 0.1 56 131 5 79 1 95 0.80 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 AAA_31 PF13614.1 157 0.0013 12.5 0.2 2 2 0.00083 0.16 5.7 0.0 10 39 107 136 105 148 0.92 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 NTPase_1 PF03266.10 168 0.00033 14.2 0.0 1 2 0.0005 0.095 6.2 0.0 3 28 102 127 100 144 0.72 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 NTPase_1 PF03266.10 168 0.00033 14.2 0.0 2 2 0.00062 0.12 5.9 0.0 86 129 150 196 135 204 0.80 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 AAA_33 PF13671.1 143 0.00034 14.3 0.0 1 1 3.3e-06 0.00062 13.5 0.0 3 70 102 192 101 203 0.63 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_38 - 377 Methyltransf_26 PF13659.1 117 0.00016 15.5 0.0 1 1 1.4e-06 0.00027 14.8 0.0 4 82 6 85 4 141 0.76 # 35534 # 36664 # 1 # ID=1_38;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.351 1_59 - 512 NAD_Gly3P_dh_N PF01210.18 157 0.0012 12.4 0.2 1 2 0.017 3.3 1.2 0.0 2 25 213 236 212 284 0.83 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 NAD_Gly3P_dh_N PF01210.18 157 0.0012 12.4 0.2 2 2 0.00013 0.024 8.2 0.0 2 56 352 405 351 415 0.69 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 2_46 - 265 XdhC_C PF13478.1 136 1.2e-34 113.4 0.0 1 1 8.2e-37 1.5e-34 113.0 0.0 1 136 106 247 106 247 0.90 # 43332 # 44126 # 1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.413 1_67 - 254 AAA_30 PF13604.1 196 0.0021 11.5 0.0 1 1 3.5e-05 0.0066 9.8 0.0 21 104 101 170 90 188 0.74 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 2_21 - 657 FtsK_SpoIIIE PF01580.13 205 9.5e-05 15.7 0.1 1 1 1.1e-06 0.00022 14.6 0.1 39 89 263 305 241 316 0.82 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_59 - 512 Lycopene_cycl PF05834.7 374 0.00025 13.8 5.7 1 3 3.9e-05 0.0074 9.0 0.5 1 30 212 239 212 246 0.87 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 Lycopene_cycl PF05834.7 374 0.00025 13.8 5.7 2 3 0.0039 0.73 2.4 0.0 111 141 290 319 263 332 0.75 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 Lycopene_cycl PF05834.7 374 0.00025 13.8 5.7 3 3 0.0018 0.34 3.5 0.3 1 35 351 383 351 388 0.83 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_76 - 274 ABC_tran PF00005.22 137 6.5e-33 107.7 0.1 1 1 2.3e-34 8.7e-33 107.3 0.1 1 135 29 179 29 181 0.93 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_77 - 276 ABC_tran PF00005.22 137 6.7e-28 91.5 0.1 1 1 2.5e-29 9.4e-28 91.0 0.1 2 136 29 186 28 187 0.89 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 4_13 - 110 ABC_tran PF00005.22 137 4.8e-11 36.9 0.0 1 1 2.2e-12 8.3e-11 36.1 0.0 91 137 3 45 1 45 0.91 # 10302 # 10631 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.336 3_9 - 76 ABC_tran PF00005.22 137 1.8e-06 22.1 0.0 1 1 4.7e-08 1.8e-06 22.1 0.0 9 29 2 22 1 67 0.79 # 3954 # 4181 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_21 - 657 ABC_tran PF00005.22 137 0.0015 12.6 0.0 1 1 0.00064 0.024 8.7 0.0 11 28 262 279 253 386 0.82 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_59 - 512 K_oxygenase PF13434.1 341 1.8e-05 17.6 0.0 1 2 0.014 2.6 0.6 0.0 189 210 209 230 196 242 0.71 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 K_oxygenase PF13434.1 341 1.8e-05 17.6 0.0 2 2 1.1e-06 0.0002 14.1 0.0 112 216 276 375 267 386 0.70 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_77 - 276 ATP-synt_ab PF00006.20 215 0.00069 12.9 0.1 1 1 6e-06 0.0011 12.2 0.1 7 58 30 82 25 138 0.84 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_38 - 377 Cons_hypoth95 PF03602.10 183 3.9e-05 16.9 0.0 1 1 3.3e-07 6.2e-05 16.2 0.0 43 124 3 83 1 97 0.87 # 35534 # 36664 # 1 # ID=1_38;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.351 2_21 - 657 DAP3 PF10236.4 309 7.7e-06 18.8 0.1 1 2 3.2e-05 0.006 9.3 0.0 11 51 252 290 242 301 0.78 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 2_21 - 657 DAP3 PF10236.4 309 7.7e-06 18.8 0.1 2 2 0.00024 0.045 6.4 0.0 115 171 449 509 416 556 0.69 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_67 - 254 RuvB_N PF05496.7 234 0.00085 12.2 0.0 1 2 0.076 14 -1.7 0.0 89 115 18 44 15 53 0.82 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 RuvB_N PF05496.7 234 0.00085 12.2 0.0 2 2 1.3e-05 0.0024 10.7 0.0 54 74 102 122 74 176 0.82 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 AAA_19 PF13245.1 76 1.1e-05 18.9 0.0 1 1 4.4e-07 2.8e-05 17.7 0.0 10 46 100 130 93 140 0.75 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_32 - 735 AAA_19 PF13245.1 76 0.00096 12.7 0.0 1 1 3.2e-05 0.002 11.7 0.0 17 37 402 422 397 452 0.82 # 26905 # 29109 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.427 2_21 - 657 AAA_19 PF13245.1 76 0.0022 11.6 0.0 1 1 8.7e-05 0.0055 10.3 0.0 8 48 262 296 255 306 0.77 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 4_6 - 224 NAD_binding_10 PF13460.1 183 3.5e-11 37.2 0.0 1 1 2.1e-13 3.9e-11 37.1 0.0 2 150 4 157 3 202 0.74 # 2691 # 3362 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_21 - 657 AAA_10 PF12846.2 304 3.8e-57 187.8 1.4 1 1 1.1e-58 5.4e-57 187.3 1.4 1 301 262 577 262 580 0.90 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 2_16 - 530 AAA_10 PF12846.2 304 2.4e-17 57.1 0.0 1 1 8e-19 3.8e-17 56.4 0.0 1 303 31 370 31 371 0.75 # 12079 # 13668 # -1 # ID=2_16;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 1_67 - 254 AAA_10 PF12846.2 304 0.0005 13.3 0.0 1 1 5.1e-05 0.0024 11.1 0.0 3 34 100 131 98 167 0.83 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_77 - 276 AAA_10 PF12846.2 304 0.0018 11.5 1.4 1 2 0.00081 0.038 7.1 0.3 6 23 43 60 40 69 0.83 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_77 - 276 AAA_10 PF12846.2 304 0.0018 11.5 1.4 2 2 0.01 0.48 3.5 0.0 190 293 144 255 78 268 0.68 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 4_13 - 110 SbcCD_C PF13558.1 90 0.0011 12.7 0.0 1 1 8.4e-06 0.0016 12.2 0.0 61 88 32 59 17 61 0.72 # 10302 # 10631 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.336 1_59 - 512 FAD_oxidored PF12831.2 428 1.2e-09 31.4 8.1 1 2 1.8e-11 3.4e-09 30.0 0.2 1 37 212 246 212 317 0.90 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 FAD_oxidored PF12831.2 428 1.2e-09 31.4 8.1 2 2 0.00086 0.16 4.7 2.1 1 17 351 367 351 384 0.89 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 DAO PF01266.19 358 2.3e-09 30.4 11.3 1 3 1.3e-07 2.5e-05 17.1 2.8 1 31 212 242 212 247 0.90 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 DAO PF01266.19 358 2.3e-09 30.4 11.3 2 3 5.1e-05 0.0097 8.6 0.0 147 202 265 319 260 327 0.87 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 DAO PF01266.19 358 2.3e-09 30.4 11.3 3 3 4e-05 0.0076 8.9 0.4 1 29 351 379 351 382 0.95 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 2_21 - 657 ResIII PF04851.10 184 0.00075 13.2 0.2 1 2 0.0013 0.24 5.0 0.0 8 59 238 299 234 366 0.87 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 2_21 - 657 ResIII PF04851.10 184 0.00075 13.2 0.2 2 2 0.0011 0.2 5.2 0.0 113 164 457 517 417 538 0.72 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_22 - 234 DUF3584 PF12128.3 1201 0.0011 10.1 10.5 1 1 7.4e-06 0.0014 9.8 10.5 774 860 99 175 71 206 0.41 # 20573 # 21274 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.308 2_22 - 220 TIGR00019 TIGR00019 361 0.00034 13.1 0.8 1 1 2.7e-06 0.00051 12.5 0.8 4 104 107 206 105 212 0.76 # 19190 # 19849 # -1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.350 1_59 - 512 FMO-like PF00743.14 532 0.0009 11.3 0.0 1 2 0.061 12 -2.3 0.0 434 467 188 221 175 243 0.86 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 FMO-like PF00743.14 532 0.0009 11.3 0.0 2 2 1.3e-05 0.0025 9.8 0.0 159 210 325 376 303 380 0.86 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 NAD_binding_9 PF13454.1 156 0.02 8.5 5.5 1 3 0.01 1.9 2.0 1.0 2 18 215 231 214 238 0.84 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 NAD_binding_9 PF13454.1 156 0.02 8.5 5.5 2 3 0.0011 0.21 5.1 0.0 115 155 278 318 266 319 0.74 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 NAD_binding_9 PF13454.1 156 0.02 8.5 5.5 3 3 0.012 2.3 1.8 0.0 1 17 353 369 353 395 0.88 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_67 - 254 DEAD PF00270.24 169 0.00093 12.5 0.0 1 2 0.018 3.4 0.9 0.0 102 132 17 51 10 69 0.73 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_67 - 254 DEAD PF00270.24 169 0.00093 12.5 0.0 2 2 9.6e-05 0.018 8.3 0.0 9 49 93 131 85 185 0.81 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_59 - 512 Pyr_redox PF00070.22 80 1.5e-16 54.5 6.0 1 2 0.00048 0.09 7.1 3.4 2 29 213 240 212 304 0.77 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 Pyr_redox PF00070.22 80 1.5e-16 54.5 6.0 2 2 7.4e-16 1.4e-13 44.9 0.1 2 73 352 417 351 425 0.93 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 2_16 - 530 TrwB_AAD_bind PF10412.4 386 1e-32 106.9 0.0 1 2 5.2e-06 0.00049 12.5 0.0 10 121 26 143 20 168 0.80 # 12079 # 13668 # -1 # ID=2_16;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 2_16 - 530 TrwB_AAD_bind PF10412.4 386 1e-32 106.9 0.0 2 2 3.6e-30 3.3e-28 92.1 0.0 162 380 202 425 188 429 0.79 # 12079 # 13668 # -1 # ID=2_16;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 2_21 - 657 TrwB_AAD_bind PF10412.4 386 9.6e-08 24.7 0.0 1 2 1.4e-05 0.0013 11.1 0.0 13 55 260 302 251 305 0.89 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 2_21 - 657 TrwB_AAD_bind PF10412.4 386 9.6e-08 24.7 0.0 2 2 1.5e-05 0.0014 11.1 0.0 237 319 488 573 475 598 0.78 # 17195 # 19165 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_22 - 234 TIGR00344 TIGR00344 847 0.0028 9.3 10.2 1 1 1.9e-05 0.0037 8.9 10.2 702 804 82 185 69 202 0.79 # 20573 # 21274 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.308 1_22 - 234 Kinesin-relat_1 PF12711.2 86 0.014 9.7 12.2 1 2 0.023 4.3 1.7 0.4 18 37 76 95 69 101 0.53 # 20573 # 21274 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.308 1_22 - 234 Kinesin-relat_1 PF12711.2 86 0.014 9.7 12.2 2 2 5.7e-05 0.011 10.0 5.8 2 65 102 166 101 183 0.90 # 20573 # 21274 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.308 2_16 - 530 T4SS-DNA_transf PF02534.9 469 1.9e-118 389.8 0.7 1 1 1.3e-120 2.4e-118 389.4 0.7 47 450 34 437 6 496 0.94 # 12079 # 13668 # -1 # ID=2_16;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 4_6 - 224 DapB_N PF01113.15 124 0.00027 14.7 0.2 1 1 4.5e-06 0.00084 13.1 0.0 1 45 1 45 1 68 0.83 # 2691 # 3362 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.368 1_76 - 274 ArgK PF03308.11 267 0.00026 13.6 0.0 1 1 2.5e-06 0.00047 12.7 0.0 11 46 21 56 6 70 0.79 # 77168 # 77989 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_77 - 276 Pox_A32 PF04665.7 241 0.0014 11.7 0.8 1 2 4.4e-05 0.0083 9.2 0.2 16 40 41 65 32 69 0.86 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_77 - 276 Pox_A32 PF04665.7 241 0.0014 11.7 0.8 2 2 0.02 3.8 0.5 0.0 195 235 198 237 185 252 0.56 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_67 - 254 RNA_helicase PF00910.17 107 0.0015 12.5 0.0 1 1 2.8e-05 0.0053 10.8 0.0 3 59 103 169 101 201 0.65 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_77 - 276 UPF0079 PF02367.12 123 0.00014 15.3 0.2 1 1 3.8e-06 0.00035 14.0 0.2 7 43 30 66 24 75 0.84 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 3_9 - 76 UPF0079 PF02367.12 123 0.00031 14.2 0.0 1 1 4.2e-06 0.00039 13.9 0.0 13 34 2 23 1 31 0.91 # 3954 # 4181 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_59 - 512 AlaDh_PNT_C PF01262.16 168 3.9e-05 17.1 0.7 1 2 0.00017 0.032 7.6 0.1 19 49 209 239 204 262 0.90 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 1_59 - 512 AlaDh_PNT_C PF01262.16 168 3.9e-05 17.1 0.7 2 2 0.0002 0.037 7.4 0.0 22 56 351 385 347 429 0.90 # 56021 # 57556 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.398 3_9 - 76 AAA_24 PF13479.1 213 0.00014 15.2 0.1 1 2 4.5e-05 0.0084 9.5 0.2 3 22 4 23 2 37 0.86 # 3954 # 4181 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 3_9 - 76 AAA_24 PF13479.1 213 0.00014 15.2 0.1 2 2 0.0016 0.29 4.4 0.0 123 152 38 67 31 74 0.81 # 3954 # 4181 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_32 - 735 UvrD-helicase PF00580.16 315 0.0016 11.5 4.9 1 3 0.015 2.7 0.9 0.2 144 230 164 325 148 393 0.52 # 26905 # 29109 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.427 1_32 - 735 UvrD-helicase PF00580.16 315 0.0016 11.5 4.9 2 3 0.00029 0.055 6.5 0.1 22 45 404 427 382 447 0.87 # 26905 # 29109 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.427 1_32 - 735 UvrD-helicase PF00580.16 315 0.0016 11.5 4.9 3 3 0.00055 0.1 5.6 0.1 129 253 427 554 421 560 0.82 # 26905 # 29109 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.427 1_67 - 254 AAA_25 PF13481.1 194 1.7e-05 18.1 0.0 1 1 4.1e-07 3.8e-05 16.9 0.0 28 63 93 129 72 144 0.78 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_77 - 276 AAA_25 PF13481.1 194 0.00027 14.1 0.0 1 2 0.00014 0.013 8.7 0.0 30 58 35 63 14 93 0.80 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_77 - 276 AAA_25 PF13481.1 194 0.00027 14.1 0.0 2 2 0.0053 0.5 3.5 0.0 166 188 195 217 141 218 0.83 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_38 - 377 Methyltransf_15 PF09445.5 164 2.3e-05 17.8 0.0 1 1 2.4e-07 4.4e-05 16.9 0.0 4 84 6 87 3 98 0.79 # 35534 # 36664 # 1 # ID=1_38;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.351 1_32 - 735 AAA_5 PF07728.9 139 4.5e-19 62.4 0.0 1 1 2.3e-19 1.5e-17 57.5 0.0 6 139 402 597 397 597 0.86 # 26905 # 29109 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.427 1_77 - 276 AAA_5 PF07728.9 139 2.7e-05 17.7 0.1 1 1 1e-06 6.4e-05 16.5 0.0 4 41 43 80 40 98 0.89 # 78022 # 78849 # -1 # ID=1_77;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_67 - 254 AAA_5 PF07728.9 139 0.00016 15.2 0.0 1 1 5e-06 0.00031 14.3 0.0 3 34 102 134 100 188 0.80 # 64971 # 65732 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.386 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/ef06358b-4e6d-4b99-bfcf-6ea99729bdeb # Target file: checkm_output/bins/pGCA_001578185.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001578185.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ef06358b-4e6d-4b99-bfcf-6ea99729bdeb checkm_output/bins/pGCA_001578185.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:44:30 2020 # [ok]