# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_28 - 725 IstB_IS21 PF01695.12 178 0.00067 11.9 0.1 1 1 3.3e-05 0.0032 9.8 0.0 41 84 232 275 225 300 0.84 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_56 - 272 MipZ PF09140.6 261 2.2e-05 16.4 1.2 1 1 3.1e-05 0.003 9.5 1.2 34 122 55 149 5 158 0.55 # 41966 # 42781 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.331 1_56 - 272 YhjQ PF06564.7 244 9.8e-08 24.4 0.0 1 1 1.4e-09 1.4e-07 24.0 0.0 9 153 12 161 5 188 0.79 # 41966 # 42781 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.331 1_21 - 163 SSB PF00436.20 104 2.6e-38 123.0 0.2 1 1 4.4e-40 4.3e-38 122.3 0.2 1 104 2 103 2 103 0.98 # 10762 # 11250 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.450 1_28 - 725 DUF87 PF01935.12 229 0.00069 12.3 11.6 1 3 0.052 5.1 -0.3 0.2 151 188 159 196 131 213 0.71 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_28 - 725 DUF87 PF01935.12 229 0.00069 12.3 11.6 2 3 2.1e-05 0.002 10.8 3.9 23 86 238 311 227 434 0.64 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_28 - 725 DUF87 PF01935.12 229 0.00069 12.3 11.6 3 3 0.0021 0.2 4.2 0.1 85 132 432 479 413 529 0.77 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 2_11 - 225 NB-ARC PF00931.17 287 0.00016 13.4 0.1 1 1 3.7e-06 0.00035 12.3 0.1 17 39 29 51 15 63 0.79 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_30 - 831 AAA_22 PF13401.1 131 4.4e-06 19.8 0.4 1 1 1e-06 3.3e-05 16.9 0.1 5 45 462 497 458 629 0.69 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_28 - 725 AAA_22 PF13401.1 131 0.00068 12.7 0.0 1 1 5.1e-05 0.0016 11.4 0.0 5 68 239 297 235 347 0.78 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 2_11 - 225 AAA_22 PF13401.1 131 0.00075 12.5 1.0 1 1 0.00011 0.0035 10.4 0.1 5 22 32 49 28 52 0.87 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 AAA_15 PF13175.1 415 0.00038 12.4 0.2 1 2 1.5e-05 0.0015 10.4 0.1 17 43 23 61 12 108 0.69 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 AAA_15 PF13175.1 415 0.00038 12.4 0.2 2 2 0.025 2.5 -0.2 0.0 364 410 160 199 109 203 0.74 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 AAA_17 PF13207.1 121 0.00089 13.0 0.2 1 1 3.2e-05 0.0016 12.2 0.1 2 19 34 51 33 148 0.92 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_30 - 831 AAA_17 PF13207.1 121 0.0083 9.8 5.0 1 1 0.00025 0.012 9.3 1.2 3 19 465 481 464 618 0.88 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 2_11 - 225 AAA_21 PF13304.1 303 5.1e-13 42.4 0.2 1 1 2.8e-13 2.7e-11 36.8 0.2 3 299 35 201 33 205 0.80 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_28 - 725 MobB PF03205.9 140 0.00021 13.9 0.0 1 1 2.2e-06 0.00021 13.9 0.0 4 34 242 272 240 338 0.86 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_56 - 272 ArsA_ATPase PF02374.10 305 2.5e-08 26.1 0.8 1 1 1.8e-09 1.7e-07 23.4 0.8 9 137 13 136 6 140 0.65 # 41966 # 42781 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.331 2_11 - 225 T2SE PF00437.15 272 0.00014 13.7 2.8 1 2 0.00023 0.0074 8.0 0.3 115 148 18 51 5 60 0.84 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 T2SE PF00437.15 272 0.00014 13.7 2.8 2 2 0.00094 0.03 6.0 0.1 67 178 101 213 66 221 0.74 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_30 - 831 T2SE PF00437.15 272 0.00038 12.2 0.0 1 1 2.2e-05 0.00071 11.3 0.0 118 153 451 486 418 508 0.80 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_28 - 725 T2SE PF00437.15 272 0.00045 12.0 0.1 1 1 3.1e-05 0.001 10.8 0.1 133 160 243 270 235 276 0.82 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 2_11 - 225 SMC_N PF02463.14 220 2.6e-08 26.2 3.3 1 1 1e-08 1e-06 21.0 3.3 24 212 31 214 17 220 0.65 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 Arch_ATPase PF01637.13 234 0.00019 14.0 0.1 1 1 7.9e-06 0.00076 12.0 0.1 8 68 21 77 16 215 0.70 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 AAA_16 PF13191.1 185 0.00095 12.0 2.2 1 1 3.7e-05 0.0036 10.2 2.2 22 42 29 49 15 215 0.86 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_30 - 831 AAA_23 PF13476.1 202 7.5e-06 19.2 4.3 1 1 4.8e-07 1.6e-05 18.2 0.0 18 47 460 491 428 537 0.78 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_28 - 725 AAA_23 PF13476.1 202 0.0009 12.4 20.9 1 2 0.023 0.73 2.9 1.8 150 181 165 199 139 214 0.55 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_28 - 725 AAA_23 PF13476.1 202 0.0009 12.4 20.9 2 2 7.7e-06 0.00025 14.3 11.7 24 181 243 423 229 529 0.65 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 2_11 - 225 AAA_23 PF13476.1 202 0.0035 10.5 3.0 1 1 0.00033 0.011 8.9 2.5 21 40 33 52 17 127 0.76 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_30 - 831 AAA_18 PF13238.1 129 0.00036 13.7 1.8 1 2 0.014 1.4 2.1 0.3 42 109 281 353 262 355 0.66 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_30 - 831 AAA_18 PF13238.1 129 0.00036 13.7 1.8 2 2 0.00014 0.013 8.7 0.0 2 42 465 508 465 520 0.82 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 2_11 - 225 AAA_13 PF13166.1 712 6.6e-05 14.3 0.0 1 2 4.1e-05 0.0039 8.4 0.0 20 46 35 61 9 130 0.71 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 AAA_13 PF13166.1 712 6.6e-05 14.3 0.0 2 2 0.00077 0.075 4.2 0.0 527 580 159 210 148 217 0.88 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_56 - 272 CbiA PF01656.18 195 6.8e-26 83.7 0.8 1 1 1.1e-27 1e-25 83.1 0.7 2 192 8 225 7 228 0.75 # 41966 # 42781 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.331 1_30 - 831 AAA_14 PF13173.1 128 0.00037 13.3 0.0 1 1 2.3e-05 0.0022 10.8 0.0 3 45 462 505 460 550 0.78 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 2_22 - 67 CSD PF00313.17 66 7.6e-32 101.9 1.9 1 1 1.7e-33 8.2e-32 101.7 1.9 2 65 3 65 2 66 0.98 # 26469 # 26669 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.348 2_17 - 74 CSD PF00313.17 66 7.3e-31 98.7 2.3 1 1 1.7e-32 8e-31 98.6 2.3 2 65 10 72 9 73 0.97 # 22809 # 23030 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.392 1_30 - 831 AAA_29 PF13555.1 62 2.1e-06 20.1 0.1 1 1 1.6e-07 5.1e-06 18.9 0.1 18 40 457 478 449 492 0.87 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 2_11 - 225 AAA_29 PF13555.1 62 2.4e-06 19.9 0.2 1 1 1.5e-07 4.9e-06 18.9 0.2 19 41 28 49 20 68 0.80 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_28 - 725 AAA_29 PF13555.1 62 0.00011 14.7 0.3 1 1 1.8e-05 0.00059 12.3 0.2 15 39 230 254 224 256 0.85 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 2_11 - 225 MMR_HSR1 PF01926.18 116 4.2e-05 16.4 0.6 1 1 1.4e-06 0.00013 14.8 0.6 2 37 34 123 33 221 0.53 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_18 - 254 N6_Mtase PF02384.11 311 1e-11 37.3 0.1 1 1 2e-13 1.9e-11 36.4 0.0 20 138 98 221 84 251 0.81 # 8782 # 9543 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.430 2_11 - 225 DUF258 PF03193.11 161 3.1e-06 19.3 0.1 1 1 1.4e-07 6.9e-06 18.2 0.1 24 59 19 55 7 93 0.77 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_30 - 831 DUF258 PF03193.11 161 0.00029 12.9 0.0 1 1 1.3e-05 0.00063 11.8 0.0 34 55 460 481 427 490 0.75 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_28 - 725 TraG-D_C PF12696.2 128 3.4e-09 29.5 0.0 1 2 0.016 1.6 1.5 0.7 81 114 390 420 367 433 0.53 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_28 - 725 TraG-D_C PF12696.2 128 3.4e-09 29.5 0.0 2 2 3.5e-11 3.4e-09 29.5 0.0 1 126 570 695 570 697 0.76 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_56 - 272 AAA_31 PF13614.1 157 2.1e-07 23.9 0.1 1 1 7.8e-08 7.6e-06 18.8 0.1 8 144 12 151 5 163 0.66 # 41966 # 42781 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.331 1_27 - 134 DNA_pol3_delta PF06144.8 172 3.4e-05 16.3 0.3 1 1 4.2e-07 4.1e-05 16.0 0.3 98 166 45 122 27 125 0.77 # 13651 # 14052 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.351 1_28 - 725 FtsK_SpoIIIE PF01580.13 205 1.3e-05 17.6 0.0 1 2 6.3e-07 6.1e-05 15.4 0.0 21 92 220 290 174 306 0.84 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_28 - 725 FtsK_SpoIIIE PF01580.13 205 1.3e-05 17.6 0.0 2 2 0.072 7 -1.1 0.0 185 203 589 607 576 609 0.78 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_56 - 272 MTS PF05175.9 170 0.00053 12.2 0.0 1 1 8.2e-06 0.0008 11.7 0.0 18 107 47 134 41 165 0.83 # 41966 # 42781 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.331 2_11 - 225 ABC_tran PF00005.22 137 1.3e-36 118.8 0.1 1 1 5.6e-38 1.8e-36 118.3 0.1 1 136 21 169 21 170 0.88 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 1_30 - 831 ABC_tran PF00005.22 137 1.4e-06 21.5 0.0 1 1 3.6e-07 1.2e-05 18.6 0.0 2 31 452 481 451 537 0.94 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_28 - 725 ABC_tran PF00005.22 137 0.0047 10.1 3.4 1 1 5.8e-05 0.0019 11.4 0.2 11 80 238 326 230 431 0.70 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_30 - 831 AAA_19 PF13245.1 76 4.1e-05 16.2 0.0 1 1 9.9e-07 9.6e-05 15.0 0.0 10 61 461 508 454 528 0.83 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_30 - 831 AAA_10 PF12846.2 304 9.7e-34 109.9 0.1 1 1 4.9e-35 1.6e-33 109.3 0.1 1 303 461 767 461 768 0.89 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_28 - 725 AAA_10 PF12846.2 304 1.3e-17 57.0 0.6 1 1 6.1e-19 2e-17 56.4 0.6 1 297 238 644 238 649 0.79 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 2_11 - 225 AAA_10 PF12846.2 304 0.00015 14.1 0.2 1 1 1e-05 0.00033 13.0 0.2 6 22 36 52 33 64 0.83 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 SbcCD_C PF13558.1 90 7.9e-05 15.4 0.1 1 1 1.1e-05 0.0011 11.8 0.1 27 89 136 185 118 186 0.76 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_10 - 425 DUF3584 PF12128.3 1201 0.0036 7.4 16.0 1 1 5e-05 0.0049 7.0 16.0 630 746 117 237 110 245 0.79 # 17159 # 18433 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=TAAA;rbs_spacer=5bp;gc_cont=0.424 1_30 - 831 DEAD PF00270.24 169 0.00017 14.0 0.0 1 2 1.6e-05 0.0015 10.9 0.0 13 73 460 518 450 606 0.84 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_30 - 831 DEAD PF00270.24 169 0.00017 14.0 0.0 2 2 0.034 3.3 0.0 0.0 109 136 677 704 661 728 0.76 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_28 - 725 DUF853 PF05872.7 504 0.00063 11.0 0.0 1 1 1.6e-05 0.0016 9.6 0.0 11 65 228 282 220 311 0.76 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_28 - 725 TrwB_AAD_bind PF10412.4 386 1.1e-10 33.5 0.2 1 2 1.1e-06 0.00011 13.7 0.0 13 53 236 276 229 278 0.84 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_28 - 725 TrwB_AAD_bind PF10412.4 386 1.1e-10 33.5 0.2 2 2 1.3e-07 1.3e-05 16.8 0.0 245 372 571 702 520 714 0.73 # 15200 # 17374 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_30 - 831 RNA_helicase PF00910.17 107 0.00044 13.3 0.0 1 1 1.4e-05 0.0014 11.7 0.0 2 23 465 486 464 517 0.72 # 19736 # 22228 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.419 1_21 - 163 tRNA_anti-codon PF01336.20 75 1.1e-08 27.7 0.1 1 1 2.9e-10 2.8e-08 26.4 0.1 2 68 6 96 5 103 0.67 # 10762 # 11250 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.450 2_11 - 225 AAA_24 PF13479.1 213 3.2e-05 16.4 0.4 1 2 0.0023 0.22 3.9 0.1 7 21 35 49 33 59 0.87 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 AAA_24 PF13479.1 213 3.2e-05 16.4 0.4 2 2 1.7e-05 0.0016 10.9 0.0 112 149 177 210 145 221 0.84 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 AAA_25 PF13481.1 194 0.00018 13.8 0.1 1 1 4.8e-06 0.00047 12.4 0.0 30 56 28 53 12 75 0.81 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 APS_kinase PF01583.15 157 0.00014 14.4 0.1 1 2 1.4e-05 0.0014 11.2 0.0 4 43 33 71 30 93 0.82 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 2_11 - 225 APS_kinase PF01583.15 157 0.00014 14.4 0.1 2 2 0.02 2 0.9 0.0 5 42 182 220 178 223 0.82 # 18417 # 19091 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.443 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/9ef94f36-7144-4ee1-8bb3-33500a1fb1cc # Target file: checkm_output/bins/pGCA_001558875.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001558875.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9ef94f36-7144-4ee1-8bb3-33500a1fb1cc checkm_output/bins/pGCA_001558875.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:44:28 2020 # [ok]