# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_7 - 225 AAA_17 PF13207.1 121 6.2e-07 20.6 1.2 1 1 1.3e-07 1.1e-06 19.9 1.2 23 113 24 122 21 206 0.85 # 5264 # 5938 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_4 - 225 AAA_17 PF13207.1 121 2e-06 19.0 0.8 1 1 3.5e-07 2.8e-06 18.5 0.8 23 113 24 122 19 204 0.85 # 1852 # 2526 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AAAAA;rbs_spacer=12bp;gc_cont=0.347 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/aa9b8e30-020b-4fb7-ac57-b0c6790df547 # Target file: checkm_output/bins/pGCA_001457495.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001457495.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/aa9b8e30-020b-4fb7-ac57-b0c6790df547 checkm_output/bins/pGCA_001457495.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:44:05 2020 # [ok]