# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 484 UPF0079 PF02367.12 123 7.5e-06 14.0 0.2 1 2 0.0097 0.039 2.0 0.0 70 99 238 267 229 282 0.79 # 2 # 1453 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.364 1_1 - 484 UPF0079 PF02367.12 123 7.5e-06 14.0 0.2 2 2 5e-05 0.0002 9.4 0.2 58 113 312 369 304 376 0.80 # 2 # 1453 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.364 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/986d819f-d06b-4fbc-879b-ab7320048113 # Target file: checkm_output/bins/pGCA_001433515.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001433515.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/986d819f-d06b-4fbc-879b-ab7320048113 checkm_output/bins/pGCA_001433515.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:44:02 2020 # [ok]