# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_130 - 266 Mg_chelatase PF01078.16 207 1.7e-05 17.9 0.0 1 1 4e-07 3.9e-05 16.7 0.0 20 42 95 117 79 149 0.89 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 2_27 - 337 Mg_chelatase PF01078.16 207 0.0002 14.4 0.1 1 1 6e-06 0.00057 12.9 0.1 24 43 129 148 107 205 0.91 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_133 - 301 Eno-Rase_NADH_b PF12242.3 78 2.3e-05 18.0 0.0 1 1 2.4e-07 4.6e-05 17.0 0.0 36 65 53 80 33 91 0.79 # 137697 # 138599 # 1 # ID=1_133;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.694 1_71 - 219 UPF0020 PF01170.13 180 9.4e-09 28.9 0.0 1 2 1.2e-05 0.0022 11.4 0.0 102 123 16 37 7 82 0.77 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 219 UPF0020 PF01170.13 180 9.4e-09 28.9 0.0 2 2 6e-07 0.00011 15.6 0.0 26 81 161 205 152 214 0.87 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_99 - 218 Saccharop_dh PF03435.13 386 6.3e-05 15.8 0.0 1 1 4.3e-07 8.2e-05 15.5 0.0 1 78 7 78 7 90 0.91 # 102261 # 102914 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_130 - 266 Torsin PF06309.6 127 0.0014 12.3 0.0 1 1 1.2e-05 0.0023 11.6 0.0 26 102 69 147 42 158 0.70 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 2_27 - 337 Rad17 PF03215.10 519 0.0015 11.0 0.0 1 1 1.1e-05 0.0021 10.6 0.0 43 73 125 155 114 183 0.83 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_130 - 266 IstB_IS21 PF01695.12 178 9.7e-65 211.1 0.1 1 1 6.7e-67 1.3e-64 210.7 0.1 2 178 53 229 52 229 0.99 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_1 - 228 MipZ PF09140.6 261 1.1e-09 31.5 1.5 1 3 8.8e-10 1.7e-07 24.4 0.1 2 43 4 45 3 51 0.89 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_1 - 228 MipZ PF09140.6 261 1.1e-09 31.5 1.5 2 3 0.0009 0.17 4.7 0.1 87 128 70 112 59 132 0.77 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_1 - 228 MipZ PF09140.6 261 1.1e-09 31.5 1.5 3 3 0.026 5 -0.1 0.0 212 232 170 194 154 213 0.71 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_1 - 228 YhjQ PF06564.7 244 7.8e-05 15.9 0.1 1 2 0.00016 0.031 7.4 0.1 7 38 8 39 3 44 0.89 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_1 - 228 YhjQ PF06564.7 244 7.8e-05 15.9 0.1 2 2 0.00031 0.059 6.5 0.0 105 187 71 162 60 187 0.68 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_71 - 219 Methyltransf_18 PF12847.2 112 1.4e-05 19.5 0.1 1 2 0.071 14 0.2 0.0 84 106 51 67 4 87 0.60 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 219 Methyltransf_18 PF12847.2 112 1.4e-05 19.5 0.1 2 2 4.4e-07 8.4e-05 17.0 0.0 1 46 163 206 163 216 0.88 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_59 - 974 UvrD_C_2 PF13538.1 104 1.1e-05 19.4 0.8 1 1 4.1e-07 7.7e-05 16.6 0.1 46 103 828 909 754 910 0.73 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 2_27 - 337 AAA_2 PF07724.9 171 0.00017 15.3 0.0 1 1 9.1e-06 0.0017 12.1 0.0 63 105 180 223 125 226 0.70 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_99 - 218 NmrA PF05368.8 233 7.5e-15 48.6 0.1 1 1 5.2e-17 1e-14 48.2 0.1 1 99 7 108 7 135 0.87 # 102261 # 102914 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 2_27 - 337 AAA_22 PF13401.1 131 7.3e-08 26.5 0.5 1 2 1.5e-05 0.00056 13.9 0.1 5 25 128 148 124 152 0.88 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 2_27 - 337 AAA_22 PF13401.1 131 7.3e-08 26.5 0.5 2 2 0.00045 0.017 9.1 0.0 81 130 180 239 164 240 0.73 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_59 - 974 AAA_22 PF13401.1 131 8.7e-06 19.7 0.8 1 1 1.2e-06 4.5e-05 17.4 0.8 5 127 451 572 447 575 0.72 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_130 - 266 AAA_22 PF13401.1 131 6e-05 17.0 0.2 1 1 0.00023 0.0086 10.0 0.2 5 25 98 118 94 201 0.78 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 2_23 - 1274 AAA_22 PF13401.1 131 0.00015 15.8 0.1 1 1 4.3e-05 0.0017 12.4 0.1 4 44 235 274 231 298 0.74 # 21672 # 25493 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_17 - 699 AAA_22 PF13401.1 131 0.00038 14.4 0.0 1 1 2.2e-05 0.00085 13.3 0.0 5 94 31 115 26 147 0.66 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 1_71 - 219 Methyltransf_11 PF08241.7 95 1.1e-05 19.7 0.0 1 2 7.4e-05 0.014 9.7 0.0 77 94 52 69 11 70 0.88 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 219 Methyltransf_11 PF08241.7 95 1.1e-05 19.7 0.0 2 2 0.00047 0.089 7.2 0.0 5 41 172 207 168 217 0.86 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_38 - 675 DNA_methylase PF00145.12 335 1.4e-09 31.3 0.0 1 3 0.0027 0.52 3.1 0.0 1 39 5 52 5 72 0.86 # 38277 # 40301 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 1_38 - 675 DNA_methylase PF00145.12 335 1.4e-09 31.3 0.0 2 3 1.1e-06 0.00021 14.3 0.0 105 163 150 210 127 230 0.85 # 38277 # 40301 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 1_38 - 675 DNA_methylase PF00145.12 335 1.4e-09 31.3 0.0 3 3 2e-05 0.0037 10.2 0.0 283 333 582 636 537 638 0.84 # 38277 # 40301 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 1_1 - 228 SRP54 PF00448.17 196 1.3e-05 18.5 0.4 1 1 1.6e-07 3e-05 17.3 0.4 11 42 13 44 6 90 0.81 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_71 - 219 N6_N4_Mtase PF01555.13 231 2.5e-37 122.4 0.0 1 1 5.2e-37 9.9e-35 113.9 0.0 1 230 21 202 21 203 0.91 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 2_27 - 337 AAA_17 PF13207.1 121 4.6e-05 18.1 0.0 1 1 2.6e-06 0.00017 16.3 0.0 2 32 130 162 129 251 0.85 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_17 - 699 AAA_17 PF13207.1 121 8.1e-05 17.3 0.0 1 1 4.1e-06 0.00026 15.6 0.0 2 77 33 116 32 215 0.65 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 2_23 - 1274 AAA_17 PF13207.1 121 0.00044 14.9 0.1 1 1 0.00026 0.017 9.8 0.0 4 19 240 255 238 345 0.87 # 21672 # 25493 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_123 - 336 ADH_zinc_N_2 PF13602.1 127 3.6e-14 47.6 1.0 1 1 3.8e-16 3.6e-14 47.6 1.0 1 127 202 333 202 333 0.75 # 124690 # 125697 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_4 - 354 ADH_zinc_N_2 PF13602.1 127 4.9e-09 31.0 0.0 1 1 1.9e-10 1.8e-08 29.2 0.0 2 126 219 348 218 348 0.76 # 4441 # 5502 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 1_1 - 228 MobB PF03205.9 140 0.0005 13.6 0.1 1 1 2.2e-05 0.0021 11.6 0.0 10 36 13 38 4 45 0.85 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_59 - 974 MobB PF03205.9 140 0.00058 13.4 0.2 1 1 2.2e-05 0.0021 11.6 0.2 2 32 452 482 451 505 0.87 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_1 - 228 LpxK PF02606.9 326 0.0014 11.4 0.0 1 1 1.3e-05 0.0026 10.5 0.0 46 72 12 38 4 61 0.77 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_123 - 336 ADH_zinc_N PF00107.21 130 2.1e-33 108.5 0.9 1 1 3.7e-35 3.5e-33 107.7 0.9 1 127 170 296 170 298 0.96 # 124690 # 125697 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_4 - 354 ADH_zinc_N PF00107.21 130 5e-29 94.3 1.1 1 2 0.042 4 0.8 0.2 53 79 68 94 44 96 0.74 # 4441 # 5502 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 2_4 - 354 ADH_zinc_N PF00107.21 130 5e-29 94.3 1.1 2 2 5.2e-31 5e-29 94.3 1.1 1 129 185 312 185 313 0.98 # 4441 # 5502 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 1_1 - 228 ArsA_ATPase PF02374.10 305 2.3e-05 17.3 0.4 1 2 7e-07 0.00013 14.8 0.1 9 38 11 40 4 48 0.90 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_1 - 228 ArsA_ATPase PF02374.10 305 2.3e-05 17.3 0.4 2 2 0.017 3.2 0.4 0.0 116 136 65 91 54 161 0.80 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_130 - 266 PhoH PF02562.11 205 5.7e-08 26.0 0.0 1 1 5.5e-10 1.1e-07 25.1 0.0 15 89 93 170 84 198 0.81 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_99 - 218 Shikimate_DH PF01488.15 135 0.00061 13.7 0.0 1 1 5.2e-06 0.00099 13.1 0.0 13 84 5 76 2 96 0.84 # 102261 # 102914 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_17 - 699 Zeta_toxin PF06414.7 201 7.5e-57 185.5 0.7 1 1 7e-59 1.3e-56 184.6 0.7 2 199 18 213 17 215 0.97 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 1_1 - 228 VirC1 PF07015.6 231 6.7e-12 38.8 0.0 1 1 4.7e-14 9e-12 38.3 0.0 5 183 6 181 1 218 0.76 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_1 - 228 Fer4_NifH PF00142.13 273 2e-05 17.7 0.2 1 2 1e-06 0.0002 14.4 0.1 8 38 11 41 5 55 0.89 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_1 - 228 Fer4_NifH PF00142.13 273 2e-05 17.7 0.2 2 2 0.011 2.1 1.2 0.0 193 247 157 215 106 224 0.77 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_130 - 266 Arch_ATPase PF01637.13 234 0.0013 12.3 0.0 1 2 0.00011 0.011 9.3 0.0 6 68 86 146 85 160 0.82 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_130 - 266 Arch_ATPase PF01637.13 234 0.0013 12.3 0.0 2 2 0.056 5.3 0.4 0.0 122 150 163 191 160 244 0.80 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 2_27 - 337 Arch_ATPase PF01637.13 234 0.0019 11.7 0.2 1 2 0.00033 0.032 7.7 0.1 18 34 125 141 119 142 0.88 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 2_27 - 337 Arch_ATPase PF01637.13 234 0.0019 11.7 0.2 2 2 0.039 3.7 0.9 0.0 82 149 151 222 142 235 0.62 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_17 - 699 AAA_16 PF13191.1 185 1.8e-07 25.1 0.3 1 2 3.7e-09 1.8e-07 25.1 0.3 15 103 20 106 15 178 0.71 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 1_17 - 699 AAA_16 PF13191.1 185 1.8e-07 25.1 0.3 2 2 0.017 0.8 3.5 0.6 66 120 483 574 468 625 0.73 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 2_27 - 337 AAA_16 PF13191.1 185 4.3e-06 20.6 10.3 1 3 0.0067 0.32 4.8 0.2 72 145 3 78 1 122 0.64 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 2_27 - 337 AAA_16 PF13191.1 185 4.3e-06 20.6 10.3 2 3 2.1e-05 0.00099 12.9 0.1 23 43 126 146 113 151 0.78 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 2_27 - 337 AAA_16 PF13191.1 185 4.3e-06 20.6 10.3 3 3 0.0014 0.068 6.9 0.0 145 175 180 222 161 232 0.69 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 2_23 - 1274 AAA_16 PF13191.1 185 5.4e-05 17.1 1.8 1 1 2.7e-05 0.0013 12.5 1.8 24 65 235 277 225 493 0.78 # 21672 # 25493 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_130 - 266 AAA_16 PF13191.1 185 0.00047 14.0 0.0 1 1 1.5e-05 0.00073 13.4 0.0 23 62 96 136 77 188 0.79 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_17 - 699 AAA_18 PF13238.1 129 0.00032 14.9 0.0 1 1 7e-06 0.0013 12.8 0.0 1 29 33 65 33 139 0.78 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 1_133 - 301 adh_short PF00106.20 167 1.1e-33 110.3 1.4 1 1 1.5e-35 1.4e-33 110.0 1.4 3 165 58 222 56 224 0.95 # 137697 # 138599 # 1 # ID=1_133;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.694 1_98 - 304 adh_short PF00106.20 167 3.4e-21 69.7 0.4 1 1 7.2e-23 6.9e-21 68.7 0.4 1 136 15 150 15 156 0.87 # 101320 # 102231 # -1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.588 1_1 - 228 CbiA PF01656.18 195 4.6e-27 88.5 0.1 1 1 4.5e-29 8.5e-27 87.6 0.1 2 190 6 177 5 181 0.74 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 2_27 - 337 KaiC PF06745.8 227 0.00013 15.0 0.0 1 1 5.4e-06 0.00052 13.0 0.0 11 42 119 150 115 183 0.88 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_130 - 266 KaiC PF06745.8 227 0.00035 13.5 0.0 1 1 5.7e-06 0.00054 12.9 0.0 18 65 96 143 83 166 0.86 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 2_27 - 337 AAA_14 PF13173.1 128 0.00012 15.8 0.0 1 1 3.4e-06 0.00022 15.0 0.0 2 82 127 206 126 244 0.73 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 2_23 - 1274 AAA_14 PF13173.1 128 0.00034 14.4 0.0 1 1 2.4e-05 0.0015 12.3 0.0 2 70 235 304 234 326 0.80 # 21672 # 25493 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_59 - 974 AAA_14 PF13173.1 128 0.0018 12.0 0.3 1 1 0.00073 0.046 7.4 0.3 3 98 451 569 449 581 0.56 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 2_10 - 148 DUF35 PF01796.12 68 2.5e-13 43.9 0.1 1 1 2e-15 3.8e-13 43.4 0.1 1 67 62 128 62 129 0.88 # 9862 # 10305 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.606 2_27 - 337 AAA PF00004.24 132 8.1e-31 100.8 0.0 1 1 2.8e-32 1.8e-30 99.7 0.0 1 131 130 255 130 256 0.96 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_130 - 266 AAA PF00004.24 132 1.3e-06 22.4 0.0 1 1 3.7e-08 2.3e-06 21.6 0.0 1 70 100 171 100 236 0.82 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_17 - 699 AAA PF00004.24 132 5.4e-05 17.2 0.0 1 1 1.5e-06 9.8e-05 16.4 0.0 1 24 33 56 33 114 0.77 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 1_130 - 266 Bac_DnaA PF00308.13 219 1.5e-11 38.2 0.0 1 1 1.2e-13 2.2e-11 37.6 0.0 32 131 96 193 77 201 0.87 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_59 - 974 TK PF00265.13 176 0.003 10.9 0.6 1 1 5.3e-05 0.01 9.2 0.0 53 110 509 567 490 585 0.80 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_133 - 301 KR PF08659.5 181 8.6e-14 45.4 0.3 1 1 1.2e-15 1.2e-13 45.0 0.3 4 174 59 234 57 240 0.82 # 137697 # 138599 # 1 # ID=1_133;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.694 1_98 - 304 KR PF08659.5 181 1.1e-10 35.2 0.1 1 1 2.4e-12 2.3e-10 34.2 0.1 2 95 16 106 15 117 0.83 # 101320 # 102231 # -1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.588 1_60 - 687 TraG-D_C PF12696.2 128 1.3e-21 70.6 0.0 1 1 1.3e-23 2.5e-21 69.7 0.0 3 127 415 535 413 536 0.86 # 62686 # 64746 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.606 1_99 - 218 NAD_binding_2 PF03446.10 163 1.6e-06 21.8 0.0 1 1 1.4e-08 2.6e-06 21.2 0.0 2 100 5 117 4 124 0.74 # 102261 # 102914 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_1 - 228 AAA_31 PF13614.1 157 7.6e-10 32.7 0.2 1 2 6.7e-06 0.0013 12.5 0.0 3 40 5 42 4 46 0.89 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_1 - 228 AAA_31 PF13614.1 157 7.6e-10 32.7 0.2 2 2 1.4e-07 2.8e-05 17.9 0.0 111 155 75 119 61 121 0.89 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_59 - 974 NTPase_1 PF03266.10 168 0.00067 13.2 1.1 1 1 1.2e-05 0.0023 11.5 1.1 4 35 455 486 453 490 0.91 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_17 - 699 AAA_33 PF13671.1 143 1.2e-11 38.5 2.2 1 1 4e-13 1.9e-11 37.8 0.3 2 121 33 160 32 184 0.87 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 2_27 - 337 AAA_33 PF13671.1 143 2.5e-05 18.0 0.0 1 1 1.9e-06 9.2e-05 16.2 0.0 2 47 130 200 129 255 0.66 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_59 - 974 AAA_33 PF13671.1 143 0.00072 13.3 0.3 1 1 0.00014 0.0065 10.2 0.0 6 100 457 564 454 574 0.69 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 2_23 - 1274 AAA_33 PF13671.1 143 0.0014 12.4 0.4 1 1 0.00056 0.027 8.2 0.0 5 43 241 281 238 321 0.77 # 21672 # 25493 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_130 - 266 KTI12 PF08433.5 270 0.0017 11.4 0.0 1 1 1.7e-05 0.0033 10.4 0.0 4 81 100 170 99 172 0.80 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_71 - 219 Methyltransf_26 PF13659.1 117 7.3e-18 58.6 0.8 1 2 1.9e-10 3.6e-08 27.3 0.0 56 115 6 72 4 74 0.74 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 219 Methyltransf_26 PF13659.1 117 7.3e-18 58.6 0.8 2 2 3.3e-11 6.4e-09 29.7 0.2 1 45 164 207 164 217 0.87 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_123 - 336 2-Hacid_dh_C PF02826.14 178 0.0002 14.4 0.0 1 1 1.6e-06 0.00031 13.7 0.0 34 80 158 204 133 219 0.83 # 124690 # 125697 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_59 - 974 AAA_30 PF13604.1 196 3.3e-48 157.7 6.6 1 1 9.2e-50 8.8e-48 156.3 6.6 2 170 434 609 433 647 0.91 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_130 - 266 AAA_30 PF13604.1 196 8.9e-05 15.9 0.2 1 1 2.4e-06 0.00023 14.6 0.2 14 54 94 134 90 171 0.78 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_34 - 867 FtsK_SpoIIIE PF01580.13 205 0.0003 14.1 0.0 1 1 7.1e-06 0.0014 12.0 0.0 20 61 469 513 452 518 0.85 # 33080 # 35680 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.611 2_27 - 337 ABC_tran PF00005.22 137 0.0011 13.1 0.1 1 1 0.00012 0.011 9.8 0.0 5 29 121 145 119 152 0.87 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_17 - 699 ABC_tran PF00005.22 137 0.0011 13.1 0.0 1 1 0.00014 0.013 9.6 0.0 14 80 33 128 27 232 0.62 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 1_71 - 219 Cons_hypoth95 PF03602.10 183 9e-05 15.7 0.0 1 2 0.00025 0.047 6.9 0.0 100 127 8 33 3 78 0.77 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 219 Cons_hypoth95 PF03602.10 183 9e-05 15.7 0.0 2 2 0.00022 0.043 7.0 0.0 43 60 164 181 145 207 0.79 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_99 - 218 NAD_binding_4 PF07993.7 249 0.00017 14.3 0.0 1 1 5.4e-05 0.01 8.5 0.0 3 41 11 48 9 208 0.68 # 102261 # 102914 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_130 - 266 AAA_19 PF13245.1 76 1.1e-06 22.2 0.1 1 1 7e-08 4.5e-06 20.2 0.1 10 47 98 131 92 137 0.76 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_17 - 699 AAA_19 PF13245.1 76 2.6e-05 17.8 0.8 1 1 4.1e-07 2.6e-05 17.8 0.8 6 36 27 66 19 112 0.62 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 1_59 - 974 AAA_19 PF13245.1 76 0.00032 14.3 3.5 1 1 2.1e-05 0.0013 12.3 3.5 1 59 440 495 440 507 0.77 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_99 - 218 NAD_binding_10 PF13460.1 183 1.1e-29 97.6 0.1 1 1 1.3e-31 1.2e-29 97.4 0.1 1 182 7 203 7 204 0.85 # 102261 # 102914 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_98 - 304 NAD_binding_10 PF13460.1 183 2.5e-06 21.4 0.1 1 1 5.8e-08 5.6e-06 20.3 0.1 2 141 18 202 17 221 0.75 # 101320 # 102231 # -1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.588 1_34 - 867 AAA_10 PF12846.2 304 7.8e-48 157.2 0.1 1 1 2.8e-49 1.3e-47 156.5 0.1 1 296 490 779 490 787 0.88 # 33080 # 35680 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.611 1_60 - 687 AAA_10 PF12846.2 304 4.3e-11 36.6 0.0 1 1 1.6e-12 7.4e-11 35.8 0.0 1 297 184 489 184 494 0.66 # 62686 # 64746 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.606 2_27 - 337 AAA_10 PF12846.2 304 0.00021 14.6 0.0 1 2 0.0014 0.065 6.4 0.0 4 22 130 148 128 154 0.87 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 2_27 - 337 AAA_10 PF12846.2 304 0.00021 14.6 0.0 2 2 0.002 0.096 5.9 0.0 197 244 160 209 150 270 0.71 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_1 - 228 AAA_10 PF12846.2 304 0.00024 14.4 0.0 1 1 9.7e-06 0.00046 13.5 0.0 11 42 13 44 11 74 0.84 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_133 - 301 adh_short_C2 PF13561.1 241 1e-31 104.3 0.0 1 1 1.2e-33 1.2e-31 104.1 0.0 5 241 64 298 61 298 0.95 # 137697 # 138599 # 1 # ID=1_133;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.694 1_98 - 304 adh_short_C2 PF13561.1 241 5.9e-08 26.5 0.0 1 1 8.5e-10 8.1e-08 26.1 0.0 6 163 24 177 21 182 0.83 # 101320 # 102231 # -1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.588 1_99 - 218 3Beta_HSD PF01073.14 280 9.9e-07 21.5 0.0 1 1 7.3e-09 1.4e-06 21.0 0.0 3 117 10 113 8 121 0.79 # 102261 # 102914 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_71 - 219 Methyltransf_31 PF13847.1 152 3.7e-07 23.7 0.0 1 2 4.9e-05 0.0093 9.4 0.0 65 112 11 74 4 114 0.71 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 219 Methyltransf_31 PF13847.1 152 3.7e-07 23.7 0.0 2 2 5.6e-06 0.0011 12.4 0.0 2 47 162 204 161 208 0.87 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_59 - 974 Viral_helicase1 PF01443.13 234 8.9e-05 15.9 1.0 1 3 3.2e-05 0.0061 9.9 0.1 3 109 455 581 454 613 0.72 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_59 - 974 Viral_helicase1 PF01443.13 234 8.9e-05 15.9 1.0 2 3 0.09 17 -1.4 0.1 114 188 662 741 656 754 0.59 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_59 - 974 Viral_helicase1 PF01443.13 234 8.9e-05 15.9 1.0 3 3 0.0099 1.9 1.7 0.0 213 234 879 911 835 911 0.60 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_130 - 266 DUF2075 PF09848.4 352 0.0013 11.5 0.1 1 1 1e-05 0.002 10.9 0.1 3 37 100 133 98 164 0.66 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_17 - 699 TIP49 PF06068.8 398 0.00022 13.8 0.1 1 1 2.1e-06 0.0004 12.9 0.1 47 73 27 53 20 67 0.82 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 1_99 - 218 Epimerase PF01370.16 236 1.6e-12 41.1 0.0 1 1 4.3e-14 2.7e-12 40.4 0.0 3 119 9 115 7 128 0.80 # 102261 # 102914 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_133 - 301 Epimerase PF01370.16 236 5.9e-06 19.6 0.0 1 1 1.5e-07 9.3e-06 19.0 0.0 1 158 58 223 58 242 0.74 # 137697 # 138599 # 1 # ID=1_133;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.694 1_98 - 304 Epimerase PF01370.16 236 2.7e-05 17.5 0.0 1 1 5.6e-07 3.5e-05 17.1 0.0 2 156 18 190 17 205 0.75 # 101320 # 102231 # -1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.588 1_17 - 699 DUF815 PF05673.8 250 0.00051 12.8 0.0 1 1 4.9e-06 0.00093 12.0 0.0 52 107 29 84 9 87 0.79 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 1_71 - 219 PrmA PF06325.8 295 0.00089 12.2 0.0 1 1 6.3e-06 0.0012 11.8 0.0 144 201 143 202 139 210 0.76 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_60 - 687 TrwB_AAD_bind PF10412.4 386 2.5e-140 461.2 0.0 1 1 3.3e-142 3.1e-140 460.9 0.0 2 385 171 554 170 555 0.99 # 62686 # 64746 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.606 1_34 - 867 TrwB_AAD_bind PF10412.4 386 0.0014 11.0 0.0 1 1 2.6e-05 0.0025 10.3 0.0 9 45 484 520 478 556 0.83 # 33080 # 35680 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.611 1_59 - 974 AAA_11 PF13086.1 236 1.2e-05 18.8 3.7 1 2 0.00012 0.023 8.0 0.0 2 67 434 503 433 535 0.69 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_59 - 974 AAA_11 PF13086.1 236 1.2e-05 18.8 3.7 2 2 1.5e-05 0.0029 11.0 0.1 192 232 532 575 523 576 0.79 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_130 - 266 Sigma54_activ_2 PF14532.1 138 0.0016 12.3 0.2 1 1 2.6e-05 0.0049 10.7 0.1 8 41 82 117 75 152 0.81 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_60 - 687 T4SS-DNA_transf PF02534.9 469 9.1e-16 51.2 0.0 1 2 0.031 5.9 -0.9 0.0 54 122 194 258 144 322 0.65 # 62686 # 64746 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.606 1_60 - 687 T4SS-DNA_transf PF02534.9 469 9.1e-16 51.2 0.0 2 2 1.8e-17 3.5e-15 49.3 0.0 252 443 361 553 358 561 0.91 # 62686 # 64746 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.606 1_71 - 219 MethyltransfD12 PF02086.10 260 0.00087 12.6 0.1 1 2 0.019 3.7 0.7 0.0 177 199 20 37 14 78 0.82 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 219 MethyltransfD12 PF02086.10 260 0.00087 12.6 0.1 2 2 3.5e-05 0.0066 9.7 0.0 20 46 163 189 150 205 0.80 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_130 - 266 ArgK PF03308.11 267 0.0015 11.1 0.0 1 1 1.8e-05 0.0034 10.0 0.0 27 60 95 129 76 135 0.78 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_59 - 974 PIF1 PF05970.9 364 6.9e-06 19.0 0.5 1 2 4.3e-07 8.3e-05 15.4 0.0 14 118 442 548 435 563 0.77 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_59 - 974 PIF1 PF05970.9 364 6.9e-06 19.0 0.5 2 2 0.009 1.7 1.2 0.1 265 321 670 728 649 735 0.78 # 59755 # 62676 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.636 1_71 - 219 Methyltransf_23 PF13489.1 161 0.00033 14.2 0.0 1 2 0.01 2 1.9 0.0 97 131 54 86 23 104 0.75 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 219 Methyltransf_23 PF13489.1 161 0.00033 14.2 0.0 2 2 2.9e-05 0.0055 10.3 0.0 6 54 147 195 141 210 0.83 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 2_27 - 337 RNA_helicase PF00910.17 107 0.00057 13.9 0.0 1 1 6.4e-06 0.0012 12.8 0.0 1 20 130 149 130 218 0.78 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_99 - 218 TrkA_N PF02254.13 116 1.7e-05 18.6 0.0 1 1 1.7e-07 3.2e-05 17.7 0.0 6 71 13 76 7 115 0.88 # 102261 # 102914 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_123 - 336 AlaDh_PNT_C PF01262.16 168 3.6e-07 23.7 0.1 1 1 3.4e-09 6.5e-07 22.9 0.1 20 69 159 209 150 216 0.89 # 124690 # 125697 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_104 - 1050 tRNA_anti-codon PF01336.20 75 5.3e-07 23.3 0.0 1 1 6.2e-09 1.2e-06 22.2 0.0 4 69 962 1028 959 1033 0.75 # 106810 # 109959 # 1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.675 2_27 - 337 AAA_25 PF13481.1 194 2.9e-08 27.1 0.1 1 2 7.2e-06 0.00046 13.4 0.0 10 56 104 150 97 162 0.82 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 2_27 - 337 AAA_25 PF13481.1 194 2.9e-08 27.1 0.1 2 2 5.6e-05 0.0036 10.5 0.0 139 190 182 235 153 239 0.85 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_130 - 266 AAA_25 PF13481.1 194 0.00015 15.0 0.1 1 1 5.6e-06 0.00036 13.8 0.1 33 59 97 123 80 141 0.80 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_1 - 228 AAA_25 PF13481.1 194 0.0013 11.9 0.2 1 1 4.8e-05 0.003 10.8 0.1 42 86 12 46 5 129 0.76 # 74 # 757 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_71 - 219 Methyltransf_15 PF09445.5 164 4.5e-05 16.9 0.0 1 2 0.024 4.6 0.6 0.0 55 79 6 29 3 31 0.87 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 219 Methyltransf_15 PF09445.5 164 4.5e-05 16.9 0.0 2 2 2.2e-06 0.00041 13.7 0.0 3 38 166 201 164 206 0.89 # 73541 # 74197 # -1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_130 - 266 AAA_28 PF13521.1 163 1.2e-05 19.2 0.4 1 2 3e-07 5.6e-05 17.0 0.4 1 24 99 122 99 167 0.73 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_130 - 266 AAA_28 PF13521.1 163 1.2e-05 19.2 0.4 2 2 0.038 7.2 0.4 0.0 54 93 136 175 120 237 0.66 # 134195 # 134992 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_17 - 699 AAA_5 PF07728.9 139 9.4e-05 16.0 0.0 1 1 2.3e-06 0.00022 14.8 0.0 2 45 33 76 32 139 0.81 # 15727 # 17823 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.707 2_27 - 337 AAA_5 PF07728.9 139 0.0002 14.9 0.2 1 1 3.3e-05 0.0032 11.0 0.3 2 23 130 151 129 248 0.88 # 30323 # 31333 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/229785c8-e12f-47e3-9a61-3b376c257fdf # Target file: checkm_output/bins/pGCA_001411805.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001411805.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/229785c8-e12f-47e3-9a61-3b376c257fdf checkm_output/bins/pGCA_001411805.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:44:04 2020 # [ok]