#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_2                  -            241 AAA_22               PF13401.1    131   5.9e-07   19.1   0.1   1   1   1.3e-07   1.1e-06   18.2   0.1     9    99     5   114     1   179 0.78 # 634 # 1356 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.307
1_2                  -            241 Sigma54_activat      PF00158.21   168   5.5e-05   12.0   0.0   1   1   1.2e-05   9.4e-05   11.3   0.0    28    70     6    49     2    52 0.94 # 634 # 1356 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.307
1_2                  -            241 Helicase_RecD        PF05127.9    177   5.2e-05   12.3   0.0   1   1   9.2e-06   7.3e-05   11.8   0.0     4   109     7   121     4   129 0.76 # 634 # 1356 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.307
1_2                  -            241 Zot                  PF05707.7    193   4.4e-19   58.0   1.0   1   1   1.3e-19     1e-18   56.8   0.8     1   148     1   177     1   196 0.73 # 634 # 1356 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.307
1_2                  -            241 DUF2075              PF09848.4    352   2.1e-06   16.2   0.0   1   1   4.1e-07   3.3e-06   15.5   0.0     5   106     4   125     1   144 0.55 # 634 # 1356 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.307
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/7a5159ee-0238-46a5-bb67-68d57f0cfe9d
# Target file:     checkm_output/bins/pGCA_001042715.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001042715.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7a5159ee-0238-46a5-bb67-68d57f0cfe9d checkm_output/bins/pGCA_001042715.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:43:44 2020
# [ok]