# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_55 - 328 UPF0020 PF01170.13 180 3.1e-08 26.5 0.0 1 2 2.8e-05 0.0016 11.1 0.0 102 121 126 145 109 181 0.76 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_55 - 328 UPF0020 PF01170.13 180 3.1e-08 26.5 0.0 2 2 6.6e-06 0.00037 13.2 0.0 24 80 269 314 260 322 0.81 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_32 - 643 UPF0020 PF01170.13 180 1.7e-07 24.1 0.0 1 1 5.6e-09 3.2e-07 23.2 0.0 32 126 198 305 179 317 0.75 # 33722 # 35650 # 1 # ID=1_32;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_23 - 224 MipZ PF09140.6 261 2.2e-07 23.3 0.3 1 1 3.3e-09 3.7e-07 22.5 0.3 2 45 2 45 1 111 0.87 # 26427 # 27098 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.565 1_55 - 328 Methyltransf_18 PF12847.2 112 0.00057 13.6 0.1 1 1 1.3e-05 0.0014 12.3 0.1 2 45 274 315 273 324 0.87 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_72 - 940 UvrD_C_2 PF13538.1 104 2.2e-08 27.3 1.1 1 1 8e-10 9.1e-08 25.3 0.2 4 104 784 899 768 899 0.62 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_70 - 640 DUF87 PF01935.12 229 0.001 12.0 0.0 1 1 3.4e-05 0.0038 10.1 0.0 23 81 184 238 176 370 0.70 # 73121 # 75040 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.580 1_72 - 940 AAA_22 PF13401.1 131 1.1e-07 25.1 0.0 1 1 4.3e-09 4.9e-07 23.1 0.0 3 127 442 565 439 568 0.73 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_55 - 328 N6_N4_Mtase PF01555.13 231 3.8e-34 111.2 0.0 1 2 8.4e-11 9.5e-09 28.1 0.0 1 114 131 234 131 249 0.85 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_55 - 328 N6_N4_Mtase PF01555.13 231 3.8e-34 111.2 0.0 2 2 4.2e-27 4.8e-25 81.4 0.0 169 230 251 312 239 313 0.92 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_72 - 940 AAA_17 PF13207.1 121 1.3e-05 19.2 0.0 1 1 1.6e-05 0.00088 13.2 0.0 2 97 446 560 445 662 0.65 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_7 - 471 AAA_17 PF13207.1 121 0.00012 16.0 0.0 1 1 9e-06 0.00051 14.0 0.0 5 78 37 155 33 248 0.60 # 4492 # 5904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_34 - 879 AAA_21 PF13304.1 303 2.7e-05 17.3 0.0 1 2 0.00041 0.046 6.7 0.0 1 13 102 114 102 153 0.90 # 37097 # 39733 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 1_34 - 879 AAA_21 PF13304.1 303 2.7e-05 17.3 0.0 2 2 0.00011 0.012 8.6 0.0 229 302 622 696 567 697 0.83 # 37097 # 39733 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 1_16 - 301 Ribosomal_L35p PF01632.14 61 0.00022 14.2 1.3 1 1 5.1e-06 0.00058 12.9 1.3 14 44 194 224 193 230 0.86 # 15036 # 15938 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.703 1_23 - 224 ArsA_ATPase PF02374.10 305 4.2e-05 15.7 0.1 1 1 5.8e-07 6.6e-05 15.1 0.1 8 38 8 38 1 53 0.88 # 26427 # 27098 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.565 1_7 - 471 Zeta_toxin PF06414.7 201 1.1e-57 187.5 0.7 1 1 1.7e-59 1.9e-57 186.7 0.7 10 198 25 213 16 216 0.96 # 4492 # 5904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_34 - 879 SMC_N PF02463.14 220 9.7e-09 27.8 0.4 1 2 0.0014 0.15 4.3 0.1 23 38 99 114 81 121 0.80 # 37097 # 39733 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 1_34 - 879 SMC_N PF02463.14 220 9.7e-09 27.8 0.4 2 2 5.8e-09 6.5e-07 21.8 0.0 135 200 526 694 210 714 0.74 # 37097 # 39733 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 1_23 - 224 VirC1 PF07015.6 231 6.4e-08 25.0 0.1 1 1 1.8e-09 2e-07 23.3 0.1 3 189 2 187 1 218 0.77 # 26427 # 27098 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.565 1_72 - 940 AAA_16 PF13191.1 185 9.8e-05 15.5 0.5 1 1 6.9e-06 0.00039 13.5 0.0 25 63 444 481 413 559 0.79 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_7 - 471 AAA_16 PF13191.1 185 0.00022 14.3 0.9 1 2 2.6e-05 0.0015 11.6 0.1 6 61 7 69 6 258 0.72 # 4492 # 5904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_7 - 471 AAA_16 PF13191.1 185 0.00022 14.3 0.9 2 2 0.059 3.3 0.7 0.1 62 105 314 350 201 409 0.64 # 4492 # 5904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_72 - 940 AAA_18 PF13238.1 129 8.3e-05 16.0 0.0 1 1 6.8e-06 0.00038 13.9 0.0 1 42 446 500 446 541 0.61 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_7 - 471 AAA_18 PF13238.1 129 0.00013 15.4 0.0 1 1 5.6e-06 0.00032 14.1 0.0 1 87 34 124 34 142 0.78 # 4492 # 5904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_34 - 879 AAA_13 PF13166.1 712 5.4e-35 114.0 0.0 1 1 1.4e-36 1.6e-34 112.4 0.0 18 586 102 708 92 727 0.61 # 37097 # 39733 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 1_23 - 224 CbiA PF01656.18 195 9.7e-18 57.3 0.0 1 1 1.3e-19 1.5e-17 56.7 0.0 1 190 3 177 3 181 0.80 # 26427 # 27098 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.565 1_32 - 643 N6_Mtase PF02384.11 311 3.3e-08 26.0 0.0 1 1 5.9e-10 6.6e-08 25.0 0.0 7 204 154 360 149 364 0.67 # 33722 # 35650 # 1 # ID=1_32;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_70 - 640 TraG-D_C PF12696.2 128 6.8e-25 80.5 0.0 1 1 9.8e-27 1.1e-24 79.8 0.0 1 127 411 533 411 534 0.89 # 73121 # 75040 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.580 1_23 - 224 AAA_31 PF13614.1 157 4.2e-07 23.1 0.2 1 2 4.6e-06 0.00052 13.0 0.0 2 40 2 40 1 45 0.88 # 26427 # 27098 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.565 1_23 - 224 AAA_31 PF13614.1 157 4.2e-07 23.1 0.2 2 2 0.00015 0.017 8.1 0.0 113 152 74 112 69 117 0.85 # 26427 # 27098 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.565 1_72 - 940 NTPase_1 PF03266.10 168 0.0016 11.3 1.9 1 1 2.9e-05 0.0033 10.2 0.0 2 34 446 478 445 534 0.89 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_7 - 471 AAA_33 PF13671.1 143 2.6e-11 36.7 1.8 1 1 1e-12 5.7e-11 35.6 0.1 2 137 34 177 33 185 0.81 # 4492 # 5904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_72 - 940 AAA_33 PF13671.1 143 0.00044 13.2 1.3 1 1 3.6e-05 0.002 11.1 0.1 2 99 446 556 445 560 0.61 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_32 - 643 Methyltransf_26 PF13659.1 117 1.4e-19 63.3 0.2 1 1 9.5e-21 5.4e-19 61.5 0.2 4 116 198 341 195 342 0.74 # 33722 # 35650 # 1 # ID=1_32;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_55 - 328 Methyltransf_26 PF13659.1 117 3.8e-16 52.3 2.0 1 2 7.8e-09 4.4e-07 23.1 0.0 55 114 115 181 19 184 0.81 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_55 - 328 Methyltransf_26 PF13659.1 117 3.8e-16 52.3 2.0 2 2 1.6e-10 8.9e-09 28.5 0.6 1 45 274 317 274 326 0.88 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_72 - 940 AAA_30 PF13604.1 196 1.1e-50 165.0 6.9 1 1 2.8e-52 3.2e-50 163.5 6.9 3 177 428 609 426 643 0.89 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_18 - 239 RecA PF00154.16 323 0.0017 10.5 0.0 1 1 2e-05 0.0023 10.1 0.0 28 130 23 124 13 132 0.79 # 17623 # 18339 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.714 1_55 - 328 Met_10 PF02475.11 200 0.0015 11.2 0.0 1 1 2e-05 0.0022 10.6 0.0 94 134 266 304 258 313 0.77 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_72 - 940 ABC_tran PF00005.22 137 5.7e-06 19.8 0.2 1 2 4.4e-06 0.00025 14.4 0.0 10 67 442 518 435 561 0.58 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_72 - 940 ABC_tran PF00005.22 137 5.7e-06 19.8 0.2 2 2 0.051 2.9 1.3 0.1 36 103 603 646 574 703 0.61 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_34 - 879 ABC_tran PF00005.22 137 0.0004 13.8 0.1 1 2 0.0004 0.023 8.1 0.0 10 32 99 121 91 130 0.81 # 37097 # 39733 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 1_34 - 879 ABC_tran PF00005.22 137 0.0004 13.8 0.1 2 2 0.019 1.1 2.7 0.0 107 125 628 646 516 662 0.86 # 37097 # 39733 # -1 # ID=1_34;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 1_55 - 328 Cons_hypoth95 PF03602.10 183 0.00016 14.2 0.0 1 2 0.00034 0.039 6.4 0.0 97 127 115 143 103 187 0.79 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_55 - 328 Cons_hypoth95 PF03602.10 183 0.00016 14.2 0.0 2 2 0.00051 0.057 5.8 0.0 43 59 274 290 252 316 0.80 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_32 - 643 Eco57I PF07669.6 106 1.1e-20 67.1 0.0 1 1 2.7e-22 3.1e-20 65.6 0.0 3 103 286 391 283 394 0.94 # 33722 # 35650 # 1 # ID=1_32;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_72 - 940 AAA_19 PF13245.1 76 1.5e-09 30.7 1.8 1 1 6.2e-11 7e-09 28.5 1.8 2 71 434 497 433 502 0.81 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_90 - 869 AAA_10 PF12846.2 304 1e-56 185.6 0.0 1 1 3.7e-58 1.4e-56 185.2 0.0 1 295 490 780 490 790 0.89 # 91257 # 93863 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 1_70 - 640 AAA_10 PF12846.2 304 9.6e-12 37.9 0.1 1 1 2e-12 7.6e-11 35.0 0.1 3 303 186 493 184 494 0.80 # 73121 # 75040 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.580 1_7 - 471 AAA_10 PF12846.2 304 0.0018 10.8 1.7 1 1 0.00016 0.0061 9.0 1.6 5 117 35 219 33 331 0.57 # 4492 # 5904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_55 - 328 Methyltransf_31 PF13847.1 152 0.00034 13.3 0.0 1 2 0.002 0.22 4.2 0.0 66 113 123 185 110 215 0.69 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_55 - 328 Methyltransf_31 PF13847.1 152 0.00034 13.3 0.0 2 2 0.00025 0.028 7.1 0.0 3 47 273 314 271 317 0.83 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_72 - 940 Viral_helicase1 PF01443.13 234 4.1e-08 26.1 1.6 1 2 7.3e-07 8.2e-05 15.2 0.1 3 107 448 572 446 598 0.74 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_72 - 940 Viral_helicase1 PF01443.13 234 4.1e-08 26.1 1.6 2 2 6.8e-05 0.0077 8.8 0.1 165 234 818 900 779 900 0.69 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_12 - 271 Methyltransf_21 PF05050.7 167 0.00017 14.6 0.5 1 1 3.9e-06 0.00044 13.3 0.5 112 148 167 203 52 225 0.80 # 8322 # 9134 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.625 1_70 - 640 TrwB_AAD_bind PF10412.4 386 4.8e-132 433.2 0.0 1 1 1e-133 5.9e-132 432.9 0.0 2 385 171 552 170 553 0.99 # 73121 # 75040 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.580 1_90 - 869 TrwB_AAD_bind PF10412.4 386 2.7e-06 19.3 0.0 1 2 1.5e-06 8.7e-05 14.3 0.0 12 55 487 530 476 555 0.85 # 91257 # 93863 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 1_90 - 869 TrwB_AAD_bind PF10412.4 386 2.7e-06 19.3 0.0 2 2 0.0057 0.32 2.5 0.0 261 320 726 782 708 804 0.87 # 91257 # 93863 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 1_72 - 940 AAA_11 PF13086.1 236 0.00035 13.3 1.1 1 2 4.1e-05 0.0046 9.6 0.0 5 37 430 463 426 512 0.76 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_72 - 940 AAA_11 PF13086.1 236 0.00035 13.3 1.1 2 2 0.024 2.7 0.5 0.0 190 230 523 566 515 568 0.74 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_70 - 640 T4SS-DNA_transf PF02534.9 469 5.2e-21 67.7 0.0 1 2 0.0023 0.26 2.8 0.0 3 85 142 227 140 309 0.75 # 73121 # 75040 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.580 1_70 - 640 T4SS-DNA_transf PF02534.9 469 5.2e-21 67.7 0.0 2 2 1.6e-21 1.8e-19 62.7 0.0 260 441 370 549 354 570 0.85 # 73121 # 75040 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.580 1_49 - 155 tRNA-synt_His PF13393.1 311 0.00031 12.9 0.2 1 1 3e-06 0.00034 12.7 0.2 166 248 37 119 28 152 0.77 # 59552 # 60016 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.695 1_72 - 940 PIF1 PF05970.9 364 3.4e-08 25.8 0.3 1 1 8e-10 9.1e-08 24.4 0.1 18 126 439 549 431 568 0.81 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_20 - 1050 tRNA_anti-codon PF01336.20 75 2.3e-07 23.7 0.0 1 1 4.7e-09 5.3e-07 22.6 0.0 4 59 962 1019 947 1033 0.78 # 19744 # 22893 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.670 1_72 - 940 NACHT PF05729.7 166 0.00037 13.3 0.0 1 1 8e-06 0.00091 12.0 0.0 1 26 444 469 444 474 0.86 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_55 - 328 Methyltransf_15 PF09445.5 164 0.00019 14.1 0.0 1 2 0.038 4.3 -0.1 0.0 55 79 116 139 107 142 0.87 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_55 - 328 Methyltransf_15 PF09445.5 164 0.00019 14.1 0.0 2 2 1.1e-05 0.0013 11.4 0.0 3 38 276 311 274 316 0.89 # 63245 # 64228 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.675 1_72 - 940 AAA_28 PF13521.1 163 0.0002 14.4 0.1 1 1 7.8e-06 0.00088 12.3 0.1 2 82 446 535 445 552 0.72 # 75639 # 78458 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/877f9732-ccdf-4b42-b487-688e9c6e676c # Target file: checkm_output/bins/pGCA_001028665.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001028665.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/877f9732-ccdf-4b42-b487-688e9c6e676c checkm_output/bins/pGCA_001028665.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:43:43 2020 # [ok]