# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_6 - 270 IstB_IS21 PF01695.12 178 0.00018 14.0 0.1 1 2 2.2e-05 0.0025 10.3 0.0 56 83 25 52 9 55 0.89 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_6 - 270 IstB_IS21 PF01695.12 178 0.00018 14.0 0.1 2 2 0.014 1.5 1.2 0.0 72 127 64 120 57 125 0.72 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 5_4 - 210 MipZ PF09140.6 261 6.6e-15 47.9 0.6 1 3 5.6e-10 2.1e-08 26.6 0.1 3 42 3 42 1 51 0.88 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 MipZ PF09140.6 261 6.6e-15 47.9 0.6 2 3 1.7e-07 6.3e-06 18.4 0.1 89 135 67 113 62 152 0.77 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 MipZ PF09140.6 261 6.6e-15 47.9 0.6 3 3 0.082 3 -0.2 0.0 210 245 166 201 130 207 0.82 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_6 - 270 MipZ PF09140.6 261 1.6e-12 40.1 0.1 1 1 3.9e-13 1.4e-11 36.9 0.1 3 142 18 172 16 183 0.68 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_41 - 209 MipZ PF09140.6 261 2.1e-12 39.6 0.5 1 2 2.2e-11 8e-10 31.2 0.1 4 135 4 115 1 130 0.77 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 1_41 - 209 MipZ PF09140.6 261 2.1e-12 39.6 0.5 2 2 0.067 2.5 0.1 0.0 212 232 170 190 137 202 0.68 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 5_4 - 210 YhjQ PF06564.7 244 7e-09 28.4 0.7 1 2 3.7e-08 4.1e-06 19.3 0.3 9 41 8 40 1 44 0.90 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 YhjQ PF06564.7 244 7e-09 28.4 0.7 2 2 0.00013 0.014 7.7 0.0 107 150 68 109 62 202 0.83 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_6 - 270 CoaE PF01121.15 180 0.00035 13.0 0.0 1 2 1.5e-05 0.0016 10.9 0.0 21 73 98 150 92 155 0.91 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_6 - 270 CoaE PF01121.15 180 0.00035 13.0 0.0 2 2 0.097 11 -1.6 0.0 42 59 204 221 198 232 0.77 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_30 - 992 UvrD_C_2 PF13538.1 104 2.5e-12 39.9 0.1 1 1 1.5e-13 1.6e-11 37.3 0.0 3 103 812 917 810 918 0.76 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_31 - 525 DUF87 PF01935.12 229 1.6e-05 17.8 0.0 1 1 4.3e-07 2.4e-05 17.3 0.0 23 73 140 187 129 315 0.82 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_16 - 890 DUF87 PF01935.12 229 0.0021 10.9 2.4 1 1 4.9e-05 0.0027 10.6 0.2 19 44 517 542 515 544 0.91 # 9958 # 12627 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.595 1_16 - 890 AAA_22 PF13401.1 131 0.00088 12.5 0.0 1 1 8.1e-05 0.0045 10.2 0.0 4 31 521 548 516 640 0.63 # 9958 # 12627 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.595 1_30 - 992 AAA_22 PF13401.1 131 0.0043 10.2 3.2 1 1 0.00053 0.029 7.6 0.2 66 125 548 611 499 617 0.74 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_41 - 209 SRP54 PF00448.17 196 1.4e-06 20.8 0.2 1 1 5.5e-08 3e-06 19.8 0.2 11 155 11 149 2 175 0.62 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 5_4 - 210 SRP54 PF00448.17 196 9.2e-05 15.0 0.2 1 1 3.1e-06 0.00017 14.1 0.2 10 40 10 40 1 187 0.81 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_4 - 396 AAA_17 PF13207.1 121 2.2e-05 18.3 2.1 1 1 5e-06 0.00018 15.4 2.1 2 112 37 162 36 303 0.75 # 1162 # 2349 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.620 5_4 - 210 AAA_17 PF13207.1 121 3.5e-05 17.7 0.0 1 1 1.4e-06 5e-05 17.2 0.0 9 78 11 102 10 172 0.67 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_6 - 270 AAA_17 PF13207.1 121 0.00013 15.8 0.1 1 1 9.2e-06 0.00034 14.5 0.1 9 64 26 86 25 144 0.64 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_6 - 270 MobB PF03205.9 140 3.8e-05 16.5 0.0 1 1 1.3e-06 7.4e-05 15.5 0.0 6 41 20 56 15 86 0.86 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 5_4 - 210 MobB PF03205.9 140 0.00021 14.0 0.0 1 1 7.6e-06 0.00042 13.1 0.0 10 75 11 61 1 125 0.68 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 ArsA_ATPase PF02374.10 305 1.6e-10 33.5 0.5 1 2 1.8e-11 6.7e-10 31.5 0.2 8 43 8 43 2 62 0.89 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 ArsA_ATPase PF02374.10 305 1.6e-10 33.5 0.5 2 2 0.087 3.2 -0.3 0.0 124 136 74 86 58 91 0.81 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_6 - 270 ArsA_ATPase PF02374.10 305 1.4e-09 30.4 0.1 1 1 2.6e-10 9.4e-09 27.7 0.1 9 73 24 87 15 141 0.73 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_41 - 209 ArsA_ATPase PF02374.10 305 3.8e-08 25.7 0.2 1 1 1.7e-09 6.3e-08 25.0 0.2 5 42 5 41 1 48 0.86 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 1_30 - 992 PhoH PF02562.11 205 1.7e-08 26.9 4.1 1 2 1e-06 0.00011 14.5 0.3 4 47 485 529 483 535 0.87 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_30 - 992 PhoH PF02562.11 205 1.7e-08 26.9 4.1 2 2 3.4e-06 0.00037 12.8 0.3 121 182 576 635 570 656 0.69 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_24 - 341 T2SE PF00437.15 272 3.8e-70 228.8 0.0 1 1 4e-72 4.4e-70 228.6 0.0 4 269 13 323 10 326 0.96 # 17504 # 18526 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 5_4 - 210 Methyltransf_24 PF13578.1 106 3.8e-05 17.6 0.1 1 1 8.8e-07 9.7e-05 16.3 0.0 10 85 17 92 11 104 0.75 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_4 - 396 Zeta_toxin PF06414.7 201 5.2e-65 211.3 0.4 1 1 7.2e-67 7.9e-65 210.7 0.4 2 200 22 217 21 218 0.98 # 1162 # 2349 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.620 2_3 - 352 Phe_tRNA-synt_N PF02912.13 73 0.00012 14.9 10.5 1 2 4.1e-06 0.00045 13.0 0.1 9 65 27 81 20 88 0.84 # 2238 # 3293 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.688 2_3 - 352 Phe_tRNA-synt_N PF02912.13 73 0.00012 14.9 10.5 2 2 0.00066 0.073 5.9 1.5 47 70 89 112 82 113 0.86 # 2238 # 3293 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.688 1_41 - 209 VirC1 PF07015.6 231 6e-10 31.6 0.1 1 1 1.3e-11 7.2e-10 31.3 0.1 4 183 3 177 1 199 0.80 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 5_4 - 210 VirC1 PF07015.6 231 1.3e-09 30.4 0.1 1 1 2.2e-10 1.2e-08 27.3 0.1 6 187 5 179 1 197 0.72 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 Fer4_NifH PF00142.13 273 5.8e-08 25.2 0.5 1 2 1.7e-08 9.3e-07 21.3 0.0 7 39 8 40 3 46 0.93 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 Fer4_NifH PF00142.13 273 5.8e-08 25.2 0.5 2 2 0.011 0.61 2.2 0.2 142 241 99 200 93 208 0.66 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_41 - 209 Fer4_NifH PF00142.13 273 1.2e-06 20.9 0.0 1 1 4.7e-08 2.6e-06 19.8 0.0 4 42 5 42 3 53 0.89 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 5_4 - 210 AAA_16 PF13191.1 185 4.5e-05 16.5 0.2 1 2 2.8e-05 0.001 12.1 0.0 34 69 11 47 9 77 0.84 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 AAA_16 PF13191.1 185 4.5e-05 16.5 0.2 2 2 0.02 0.74 2.8 0.1 50 120 93 177 87 208 0.61 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_4 - 396 AAA_16 PF13191.1 185 5.4e-05 16.3 0.1 1 1 6e-06 0.00022 14.3 0.0 14 71 23 77 17 110 0.65 # 1162 # 2349 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.620 1_30 - 992 AAA_16 PF13191.1 185 0.019 7.9 9.1 1 1 0.00021 0.0076 9.3 1.1 16 77 494 553 490 775 0.85 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_16 - 890 AAA_23 PF13476.1 202 0.0002 14.8 0.1 1 1 5.3e-06 0.00058 13.2 0.0 20 39 522 541 509 544 0.88 # 9958 # 12627 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.595 1_4 - 396 AAA_18 PF13238.1 129 2.3e-05 17.7 0.0 1 2 9.8e-06 0.00054 13.3 0.0 1 82 37 121 37 153 0.67 # 1162 # 2349 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.620 1_4 - 396 AAA_18 PF13238.1 129 2.3e-05 17.7 0.0 2 2 0.04 2.2 1.7 0.0 15 62 261 306 258 343 0.82 # 1162 # 2349 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.620 1_6 - 270 AAA_18 PF13238.1 129 0.001 12.4 0.0 1 1 4.4e-05 0.0024 11.2 0.0 8 43 26 67 25 148 0.69 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 2_3 - 352 AAA_13 PF13166.1 712 2.1e-07 22.8 17.5 1 2 3.8e-09 2.1e-07 22.8 17.5 285 470 68 248 63 255 0.83 # 2238 # 3293 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.688 2_3 - 352 AAA_13 PF13166.1 712 2.1e-07 22.8 17.5 2 2 0.021 1.2 0.4 0.5 102 173 243 311 231 342 0.41 # 2238 # 3293 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.688 5_5 - 246 AAA_13 PF13166.1 712 0.00081 10.9 3.2 1 1 1.7e-05 0.00096 10.7 3.2 367 470 80 182 6 193 0.72 # 2097 # 2834 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.702 5_4 - 210 CbiA PF01656.18 195 1.8e-34 111.8 0.8 1 1 2.2e-35 5.9e-34 110.2 0.8 3 187 5 168 3 176 0.75 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_6 - 270 CbiA PF01656.18 195 1.8e-28 92.3 0.0 1 1 9.2e-30 2.5e-28 91.8 0.0 2 175 19 211 18 227 0.79 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_41 - 209 CbiA PF01656.18 195 2.9e-25 81.8 0.3 1 1 2.2e-26 6.1e-25 80.8 0.3 2 193 4 176 3 178 0.78 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 1_38 - 166 CbiA PF01656.18 195 0.00016 14.2 0.1 1 1 1e-05 0.00029 13.3 0.1 118 167 24 73 22 102 0.89 # 29143 # 29640 # 1 # ID=1_38;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_16 - 890 AAA_29 PF13555.1 62 1.1e-05 18.0 0.6 1 2 3.6e-06 0.0004 13.0 0.1 15 45 514 543 508 546 0.79 # 9958 # 12627 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.595 1_16 - 890 AAA_29 PF13555.1 62 1.1e-05 18.0 0.6 2 2 0.0068 0.75 2.5 0.1 4 17 663 676 661 683 0.75 # 9958 # 12627 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.595 14_1 - 294 NAD_binding_11 PF14833.1 122 3e-07 23.6 3.7 1 3 0.0025 0.093 5.9 0.1 26 74 82 132 80 174 0.70 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 14_1 - 294 NAD_binding_11 PF14833.1 122 3e-07 23.6 3.7 2 3 0.0051 0.19 4.9 0.0 26 57 184 217 182 248 0.70 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 14_1 - 294 NAD_binding_11 PF14833.1 122 3e-07 23.6 3.7 3 3 0.014 0.51 3.5 0.0 26 50 252 276 250 287 0.83 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 15_1 - 266 NAD_binding_11 PF14833.1 122 4e-07 23.2 6.0 1 7 0.031 1.2 2.3 0.0 28 50 2 24 1 34 0.81 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 NAD_binding_11 PF14833.1 122 4e-07 23.2 6.0 2 7 0.012 0.44 3.7 0.0 26 50 34 58 32 69 0.83 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 NAD_binding_11 PF14833.1 122 4e-07 23.2 6.0 3 7 0.048 1.8 1.7 0.0 26 50 68 92 66 101 0.82 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 NAD_binding_11 PF14833.1 122 4e-07 23.2 6.0 4 7 0.0039 0.14 5.3 0.0 26 53 102 128 100 157 0.74 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 NAD_binding_11 PF14833.1 122 4e-07 23.2 6.0 5 7 0.057 2.1 1.5 0.0 26 51 170 194 168 221 0.73 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 NAD_binding_11 PF14833.1 122 4e-07 23.2 6.0 6 7 0.089 3.3 0.9 0.0 26 49 204 227 202 238 0.79 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 NAD_binding_11 PF14833.1 122 4e-07 23.2 6.0 7 7 0.03 1.1 2.4 0.0 26 48 238 260 236 264 0.91 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 25_1 - 120 NAD_binding_11 PF14833.1 122 0.00081 12.5 0.1 1 3 0.016 0.58 3.3 0.0 26 53 24 50 22 75 0.70 # 1 # 360 # 1 # ID=25_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.689 25_1 - 120 NAD_binding_11 PF14833.1 122 0.00081 12.5 0.1 2 3 0.029 1.1 2.5 0.0 26 51 58 82 56 91 0.75 # 1 # 360 # 1 # ID=25_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.689 25_1 - 120 NAD_binding_11 PF14833.1 122 0.00081 12.5 0.1 3 3 0.0093 0.34 4.0 0.0 26 48 92 114 90 118 0.91 # 1 # 360 # 1 # ID=25_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.689 1_31 - 525 TraG-D_C PF12696.2 128 6e-22 70.9 0.0 1 1 8.5e-24 9.4e-22 70.3 0.0 1 127 368 490 368 491 0.90 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 5_4 - 210 AAA_31 PF13614.1 157 2.5e-13 43.3 0.0 1 2 2.3e-11 8.5e-10 31.8 0.0 2 42 2 42 1 46 0.93 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 AAA_31 PF13614.1 157 2.5e-13 43.3 0.0 2 2 0.00018 0.0065 9.5 0.0 111 154 70 112 61 115 0.85 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_6 - 270 AAA_31 PF13614.1 157 2.6e-09 30.2 0.0 1 1 5.2e-10 1.9e-08 27.4 0.0 9 152 24 162 17 167 0.75 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_41 - 209 AAA_31 PF13614.1 157 2.2e-08 27.2 0.0 1 1 3.4e-09 1.2e-07 24.8 0.0 7 40 7 39 2 44 0.87 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 1_4 - 396 AAA_33 PF13671.1 143 1.2e-07 24.7 0.8 1 2 1.4e-08 1.5e-06 21.2 0.1 2 123 37 165 36 183 0.79 # 1162 # 2349 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.620 1_4 - 396 AAA_33 PF13671.1 143 1.2e-07 24.7 0.8 2 2 0.014 1.5 1.7 0.1 67 96 248 280 206 309 0.76 # 1162 # 2349 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.620 1_30 - 992 AAA_30 PF13604.1 196 6.2e-55 178.8 8.4 1 1 1.7e-56 1.9e-54 177.2 8.4 2 193 486 674 485 677 0.97 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_31 - 525 FtsK_SpoIIIE PF01580.13 205 2.3e-07 23.5 0.0 1 2 1.7e-08 1.8e-06 20.5 0.0 17 80 119 178 96 185 0.73 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_31 - 525 FtsK_SpoIIIE PF01580.13 205 2.3e-07 23.5 0.0 2 2 0.027 3 0.3 0.0 145 174 296 362 258 386 0.70 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 11_1 - 345 RBD PF02196.10 71 7.8e-14 44.3 5.9 1 9 0.011 0.12 5.3 0.0 22 52 18 50 15 59 0.78 # 2 # 1036 # 1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 11_1 - 345 RBD PF02196.10 71 7.8e-14 44.3 5.9 2 9 0.025 0.27 4.1 0.0 22 51 52 83 51 93 0.72 # 2 # 1036 # 1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 11_1 - 345 RBD PF02196.10 71 7.8e-14 44.3 5.9 3 9 0.024 0.26 4.2 0.0 22 50 86 116 81 126 0.75 # 2 # 1036 # 1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 11_1 - 345 RBD PF02196.10 71 7.8e-14 44.3 5.9 4 9 0.011 0.12 5.3 0.0 22 52 120 152 116 161 0.78 # 2 # 1036 # 1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 11_1 - 345 RBD PF02196.10 71 7.8e-14 44.3 5.9 5 9 0.027 0.3 4.0 0.0 22 50 154 184 153 194 0.73 # 2 # 1036 # 1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 11_1 - 345 RBD PF02196.10 71 7.8e-14 44.3 5.9 6 9 0.024 0.26 4.2 0.0 22 51 188 219 187 229 0.72 # 2 # 1036 # 1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 11_1 - 345 RBD PF02196.10 71 7.8e-14 44.3 5.9 7 9 0.025 0.28 4.1 0.0 22 50 222 252 219 262 0.74 # 2 # 1036 # 1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 11_1 - 345 RBD PF02196.10 71 7.8e-14 44.3 5.9 8 9 0.023 0.25 4.2 0.0 22 51 256 287 253 297 0.73 # 2 # 1036 # 1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 11_1 - 345 RBD PF02196.10 71 7.8e-14 44.3 5.9 9 9 0.026 0.28 4.1 0.0 22 51 290 321 287 330 0.74 # 2 # 1036 # 1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 14_1 - 294 RBD PF02196.10 71 3e-13 42.4 4.1 1 8 0.021 0.24 4.3 0.0 22 51 7 38 5 47 0.74 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 14_1 - 294 RBD PF02196.10 71 3e-13 42.4 4.1 2 8 0.0088 0.097 5.6 0.0 22 52 41 73 38 82 0.78 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 14_1 - 294 RBD PF02196.10 71 3e-13 42.4 4.1 3 8 0.021 0.23 4.4 0.0 22 51 75 106 74 116 0.73 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 14_1 - 294 RBD PF02196.10 71 3e-13 42.4 4.1 4 8 0.0084 0.093 5.6 0.0 22 52 109 141 105 150 0.78 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 14_1 - 294 RBD PF02196.10 71 3e-13 42.4 4.1 5 8 0.0092 0.1 5.5 0.0 22 52 143 175 141 184 0.77 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 14_1 - 294 RBD PF02196.10 71 3e-13 42.4 4.1 6 8 0.015 0.17 4.8 0.0 22 51 177 208 176 218 0.72 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 14_1 - 294 RBD PF02196.10 71 3e-13 42.4 4.1 7 8 0.0096 0.11 5.5 0.0 22 52 211 243 210 252 0.77 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 14_1 - 294 RBD PF02196.10 71 3e-13 42.4 4.1 8 8 0.017 0.19 4.6 0.0 22 51 245 276 242 287 0.73 # 1 # 882 # 1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.705 16_1 - 255 RBD PF02196.10 71 2.6e-11 36.2 2.3 1 7 0.014 0.15 4.9 0.0 22 52 18 49 15 58 0.77 # 2 # 766 # -1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 16_1 - 255 RBD PF02196.10 71 2.6e-11 36.2 2.3 2 7 0.029 0.32 3.9 0.0 22 50 51 81 48 91 0.74 # 2 # 766 # -1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 16_1 - 255 RBD PF02196.10 71 2.6e-11 36.2 2.3 3 7 0.025 0.27 4.1 0.0 22 52 85 116 83 125 0.75 # 2 # 766 # -1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 16_1 - 255 RBD PF02196.10 71 2.6e-11 36.2 2.3 4 7 0.032 0.35 3.8 0.0 22 50 118 148 114 157 0.75 # 2 # 766 # -1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 16_1 - 255 RBD PF02196.10 71 2.6e-11 36.2 2.3 5 7 0.0077 0.085 5.7 0.0 22 52 152 184 147 192 0.80 # 2 # 766 # -1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 16_1 - 255 RBD PF02196.10 71 2.6e-11 36.2 2.3 6 7 0.0086 0.095 5.6 0.0 22 52 186 218 184 226 0.79 # 2 # 766 # -1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 16_1 - 255 RBD PF02196.10 71 2.6e-11 36.2 2.3 7 7 0.022 0.24 4.3 0.0 22 50 220 249 219 253 0.75 # 2 # 766 # -1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 15_1 - 266 RBD PF02196.10 71 8.1e-11 34.7 4.2 1 7 0.015 0.16 4.8 0.0 22 51 27 58 23 68 0.74 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 RBD PF02196.10 71 8.1e-11 34.7 4.2 2 7 0.056 0.62 3.0 0.0 22 50 61 91 57 102 0.73 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 RBD PF02196.10 71 8.1e-11 34.7 4.2 3 7 0.018 0.19 4.6 0.0 22 51 95 126 91 135 0.75 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 RBD PF02196.10 71 8.1e-11 34.7 4.2 4 7 0.0076 0.083 5.8 0.0 22 52 129 161 126 170 0.78 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 RBD PF02196.10 71 8.1e-11 34.7 4.2 5 7 0.0083 0.091 5.6 0.0 22 52 163 195 162 204 0.77 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 RBD PF02196.10 71 8.1e-11 34.7 4.2 6 7 0.035 0.38 3.7 0.0 22 42 197 217 196 237 0.74 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 15_1 - 266 RBD PF02196.10 71 8.1e-11 34.7 4.2 7 7 0.05 0.55 3.1 0.0 22 41 231 250 227 261 0.85 # 2 # 799 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.704 18_1 - 227 RBD PF02196.10 71 1.7e-10 33.6 1.7 1 6 0.0057 0.062 6.2 0.0 22 52 23 55 18 64 0.78 # 3 # 683 # 1 # ID=18_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.703 18_1 - 227 RBD PF02196.10 71 1.7e-10 33.6 1.7 2 6 0.013 0.14 5.1 0.0 22 52 57 88 56 97 0.76 # 3 # 683 # 1 # ID=18_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.703 18_1 - 227 RBD PF02196.10 71 1.7e-10 33.6 1.7 3 6 0.021 0.24 4.3 0.0 22 51 90 121 87 131 0.73 # 3 # 683 # 1 # ID=18_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.703 18_1 - 227 RBD PF02196.10 71 1.7e-10 33.6 1.7 4 6 0.0058 0.064 6.1 0.0 22 52 124 156 120 165 0.78 # 3 # 683 # 1 # ID=18_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.703 18_1 - 227 RBD PF02196.10 71 1.7e-10 33.6 1.7 5 6 0.0065 0.072 6.0 0.0 22 52 158 190 157 199 0.77 # 3 # 683 # 1 # ID=18_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.703 18_1 - 227 RBD PF02196.10 71 1.7e-10 33.6 1.7 6 6 0.041 0.45 3.4 0.0 22 41 192 211 188 221 0.85 # 3 # 683 # 1 # ID=18_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.703 24_1 - 133 RBD PF02196.10 71 6.7e-08 25.3 0.3 1 4 0.0052 0.058 6.3 0.0 22 52 7 38 4 46 0.78 # 1 # 399 # 1 # ID=24_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.702 24_1 - 133 RBD PF02196.10 71 6.7e-08 25.3 0.3 2 4 0.0096 0.11 5.4 0.0 22 51 40 71 39 81 0.72 # 1 # 399 # 1 # ID=24_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.702 24_1 - 133 RBD PF02196.10 71 6.7e-08 25.3 0.3 3 4 0.0024 0.027 7.4 0.0 22 52 74 106 71 115 0.78 # 1 # 399 # 1 # ID=24_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.702 24_1 - 133 RBD PF02196.10 71 6.7e-08 25.3 0.3 4 4 0.025 0.28 4.1 0.0 22 41 108 127 106 132 0.84 # 1 # 399 # 1 # ID=24_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.702 23_1 - 143 RBD PF02196.10 71 1.1e-07 24.6 0.4 1 4 0.006 0.066 6.1 0.0 22 52 18 49 15 57 0.78 # 2 # 430 # 1 # ID=23_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 23_1 - 143 RBD PF02196.10 71 1.1e-07 24.6 0.4 2 4 0.01 0.11 5.4 0.0 22 51 51 82 48 92 0.73 # 2 # 430 # 1 # ID=23_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 23_1 - 143 RBD PF02196.10 71 1.1e-07 24.6 0.4 3 4 0.0027 0.029 7.2 0.0 22 52 85 117 81 126 0.78 # 2 # 430 # 1 # ID=23_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 23_1 - 143 RBD PF02196.10 71 1.1e-07 24.6 0.4 4 4 0.029 0.32 3.9 0.0 22 40 119 137 115 141 0.85 # 2 # 430 # 1 # ID=23_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 25_1 - 120 RBD PF02196.10 71 5e-06 19.3 0.1 1 3 0.0042 0.046 6.6 0.0 22 52 17 49 14 58 0.74 # 1 # 360 # 1 # ID=25_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.689 25_1 - 120 RBD PF02196.10 71 5e-06 19.3 0.1 2 3 0.004 0.044 6.7 0.0 22 52 51 83 47 92 0.74 # 1 # 360 # 1 # ID=25_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.689 25_1 - 120 RBD PF02196.10 71 5e-06 19.3 0.1 3 3 0.016 0.18 4.7 0.0 22 41 85 104 83 117 0.84 # 1 # 360 # 1 # ID=25_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.689 26_1 - 89 RBD PF02196.10 71 0.00011 15.0 0.0 1 2 0.002 0.022 7.6 0.0 22 52 21 52 17 61 0.78 # 2 # 268 # 1 # ID=26_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.682 26_1 - 89 RBD PF02196.10 71 0.00011 15.0 0.0 2 2 0.004 0.044 6.7 0.0 22 50 54 84 50 88 0.75 # 2 # 268 # 1 # ID=26_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.682 27_1 - 87 RBD PF02196.10 71 0.00013 14.7 0.0 1 2 0.00095 0.01 8.7 0.0 22 52 18 50 14 59 0.78 # 2 # 262 # 1 # ID=27_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 27_1 - 87 RBD PF02196.10 71 0.00013 14.7 0.0 2 2 0.0094 0.1 5.5 0.0 22 41 52 71 51 84 0.83 # 2 # 262 # 1 # ID=27_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.697 1_30 - 992 AAA_19 PF13245.1 76 2.6e-08 26.6 7.6 1 2 1.9e-08 7.1e-07 22.0 0.4 2 75 493 564 493 565 0.84 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_30 - 992 AAA_19 PF13245.1 76 2.6e-08 26.6 7.6 2 2 0.00078 0.028 7.3 0.0 30 63 682 719 676 734 0.73 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 5_4 - 210 AAA_19 PF13245.1 76 6.8e-06 18.9 2.6 1 2 8.3e-07 3.1e-05 16.8 0.0 20 56 11 45 6 63 0.88 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 AAA_19 PF13245.1 76 6.8e-06 18.9 2.6 2 2 0.07 2.6 1.0 0.2 42 60 169 189 144 201 0.72 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_41 - 209 AAA_19 PF13245.1 76 0.00036 13.3 2.2 1 1 2.1e-05 0.00075 12.3 2.1 15 46 6 33 3 130 0.90 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 1_16 - 890 AAA_10 PF12846.2 304 5.9e-19 61.6 0.0 1 1 8.9e-20 2.4e-18 59.6 0.0 2 304 522 803 521 803 0.85 # 9958 # 12627 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.595 1_31 - 525 AAA_10 PF12846.2 304 1.6e-10 33.9 0.2 1 2 4.7e-09 1.3e-07 24.3 0.0 1 43 140 182 140 266 0.85 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_31 - 525 AAA_10 PF12846.2 304 1.6e-10 33.9 0.2 2 2 0.00065 0.018 7.5 0.0 214 300 348 447 319 451 0.74 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 5_4 - 210 AAA_10 PF12846.2 304 3.3e-05 16.4 0.0 1 1 1.8e-06 5e-05 15.9 0.0 11 51 11 53 9 110 0.91 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_6 - 270 AAA_10 PF12846.2 304 0.00012 14.6 0.0 1 2 5.5e-05 0.0015 11.0 0.0 11 43 26 59 24 84 0.85 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_6 - 270 AAA_10 PF12846.2 304 0.00012 14.6 0.0 2 2 0.04 1.1 1.6 0.0 23 100 122 205 117 261 0.65 # 4618 # 5427 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_30 - 992 Viral_helicase1 PF01443.13 234 6.8e-12 38.4 0.6 1 2 2.1e-06 0.00023 13.8 0.1 4 151 508 662 506 703 0.72 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_30 - 992 Viral_helicase1 PF01443.13 234 6.8e-12 38.4 0.6 2 2 3.9e-09 4.3e-07 22.7 0.1 181 234 871 919 827 919 0.80 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_30 - 992 DUF2075 PF09848.4 352 0.00086 11.3 2.1 1 2 2.4e-05 0.0026 9.7 0.6 4 129 505 613 502 700 0.65 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_30 - 992 DUF2075 PF09848.4 352 0.00086 11.3 2.1 2 2 0.029 3.2 -0.4 0.0 324 349 893 918 870 921 0.63 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_31 - 525 DEAD PF00270.24 169 0.00087 11.8 0.0 1 1 1.2e-05 0.0014 11.2 0.0 8 50 134 174 132 291 0.88 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_31 - 525 TrwB_AAD_bind PF10412.4 386 1.8e-126 414.8 0.0 1 1 1.9e-128 2.1e-126 414.6 0.0 2 386 127 510 126 510 0.96 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_30 - 992 AAA_11 PF13086.1 236 0.00034 13.2 3.2 1 1 3.9e-05 0.0043 9.6 3.1 2 133 486 647 485 733 0.50 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_31 - 525 T4SS-DNA_transf PF02534.9 469 1.4e-21 69.5 0.0 1 2 0.077 8.5 -2.2 0.0 47 84 143 182 100 185 0.80 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_31 - 525 T4SS-DNA_transf PF02534.9 469 1.4e-21 69.5 0.0 2 2 3e-23 3.3e-21 68.3 0.0 220 447 288 512 219 520 0.85 # 24144 # 25718 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 5_4 - 210 ArgK PF03308.11 267 0.00026 12.8 0.1 1 1 5.4e-06 0.00059 11.7 0.1 37 68 9 40 1 46 0.84 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_41 - 209 AAA_24 PF13479.1 213 7.5e-06 18.7 0.0 1 1 2.1e-07 1.2e-05 18.1 0.0 7 77 5 87 2 90 0.77 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 5_4 - 210 AAA_24 PF13479.1 213 0.00045 12.9 0.0 1 1 1.7e-05 0.00092 11.8 0.0 12 84 10 92 5 101 0.67 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 5_4 - 210 AAA_25 PF13481.1 194 2.7e-05 16.7 0.3 1 1 2.1e-06 7.6e-05 15.2 0.3 41 85 9 43 3 106 0.63 # 1385 # 2014 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.633 1_41 - 209 AAA_25 PF13481.1 194 6.7e-05 15.4 0.1 1 1 3.1e-06 0.00011 14.6 0.1 36 78 4 35 2 85 0.82 # 31407 # 32033 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.665 1_16 - 890 AAA_25 PF13481.1 194 0.00014 14.3 0.0 1 1 1.8e-05 0.00066 12.1 0.0 27 76 517 565 497 632 0.70 # 9958 # 12627 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.595 1_30 - 992 Herpes_Helicase PF02689.9 819 0.00031 11.6 0.0 1 2 0.029 3.1 -1.7 0.0 174 210 553 589 539 595 0.74 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_30 - 992 Herpes_Helicase PF02689.9 819 0.00031 11.6 0.0 2 2 9.8e-06 0.0011 9.8 0.0 741 785 872 917 848 924 0.84 # 21155 # 24130 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/e6c31ce2-dbf8-4b42-a215-a739712153a7 # Target file: checkm_output/bins/pGCA_001028285.3.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001028285.3.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/e6c31ce2-dbf8-4b42-a215-a739712153a7 checkm_output/bins/pGCA_001028285.3.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:43:41 2020 # [ok]