# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_4 - 301 UPF0020 PF01170.13 180 2.7e-05 17.2 0.0 1 2 0.0022 0.31 4.0 0.0 101 117 38 56 24 93 0.70 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 3_4 - 301 UPF0020 PF01170.13 180 2.7e-05 17.2 0.0 2 2 1.5e-05 0.0022 11.0 0.0 24 42 241 259 231 291 0.87 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 8_4 - 195 Seryl_tRNA_N PF02403.17 108 0.00045 13.7 15.2 1 2 6.9e-06 0.001 12.6 8.4 22 92 71 141 55 148 0.85 # 3371 # 3955 # 1 # ID=8_4;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.624 8_4 - 195 Seryl_tRNA_N PF02403.17 108 0.00045 13.7 15.2 2 2 0.0027 0.4 4.2 2.8 58 96 142 184 132 189 0.45 # 3371 # 3955 # 1 # ID=8_4;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.624 2_8 - 213 MipZ PF09140.6 261 1.2e-15 50.7 0.6 1 2 5.6e-12 2.7e-10 33.1 0.2 3 52 4 52 2 61 0.85 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 2_8 - 213 MipZ PF09140.6 261 1.2e-15 50.7 0.6 2 2 9e-07 4.4e-05 16.1 0.0 90 135 69 114 48 119 0.84 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 MipZ PF09140.6 261 1.6e-10 33.9 1.6 1 2 1.4e-09 7e-08 25.2 0.1 2 40 3 41 2 54 0.90 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 1_25 - 210 MipZ PF09140.6 261 1.6e-10 33.9 1.6 2 2 0.00024 0.012 8.1 0.1 96 135 73 112 46 156 0.75 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 1_3 - 243 MipZ PF09140.6 261 5e-05 15.9 0.0 1 1 3.6e-06 0.00018 14.1 0.0 8 47 11 50 5 58 0.93 # 625 # 1353 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 2_8 - 213 YhjQ PF06564.7 244 9.1e-10 31.7 0.2 1 2 1.5e-05 0.0011 11.8 0.3 1 41 1 41 1 45 0.92 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 2_8 - 213 YhjQ PF06564.7 244 9.1e-10 31.7 0.2 2 2 2.9e-07 2.1e-05 17.4 0.0 108 231 69 196 48 204 0.74 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 YhjQ PF06564.7 244 5e-05 16.2 1.4 1 1 1.6e-06 0.00012 14.9 0.1 1 41 1 41 1 45 0.94 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 6_2 - 490 UvrD_C_2 PF13538.1 104 3.1e-13 43.2 0.1 1 1 8.6e-15 1.3e-12 41.3 0.1 3 103 339 438 337 439 0.83 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_4 - 516 DUF87 PF01935.12 229 1.2e-11 38.3 0.0 1 1 1.3e-13 2e-11 37.6 0.0 11 75 116 176 102 226 0.85 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_6 - 417 AAA_22 PF13401.1 131 0.00013 15.5 0.0 1 1 6.9e-06 0.0005 13.7 0.0 3 70 25 139 22 168 0.75 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 6_2 - 490 AAA_22 PF13401.1 131 0.0007 13.2 0.8 1 2 0.00018 0.013 9.0 0.1 4 122 35 136 31 142 0.63 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 AAA_22 PF13401.1 131 0.0007 13.2 0.8 2 2 0.078 5.7 0.5 0.0 21 78 211 260 168 281 0.71 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 2_8 - 213 DUF1611 PF07755.6 301 2.3e-05 16.6 5.2 1 2 3.3e-06 0.00048 12.2 1.7 124 192 13 84 4 86 0.90 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 2_8 - 213 DUF1611 PF07755.6 301 2.3e-05 16.6 5.2 2 2 0.00027 0.04 5.9 0.1 185 228 98 143 87 180 0.70 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 3_4 - 301 Methyltransf_11 PF08241.7 95 0.0002 15.3 0.0 1 2 0.00052 0.076 7.0 0.0 72 94 75 97 69 98 0.86 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 3_4 - 301 Methyltransf_11 PF08241.7 95 0.0002 15.3 0.0 2 2 0.001 0.15 6.1 0.0 6 47 255 295 250 300 0.76 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 2_8 - 213 SRP54 PF00448.17 196 4.7e-06 19.6 1.8 1 1 1.8e-07 8.7e-06 18.7 1.8 7 91 8 85 2 92 0.78 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 SRP54 PF00448.17 196 7.4e-05 15.7 0.1 1 1 2.7e-06 0.00013 14.9 0.1 10 38 11 39 2 84 0.91 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 1_6 - 417 SRP54 PF00448.17 196 0.0011 11.9 0.0 1 1 3.8e-05 0.0018 11.1 0.0 3 35 28 60 26 62 0.90 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 6_2 - 490 KAP_NTPase PF07693.9 325 0.00073 12.0 0.0 1 1 9.3e-06 0.0014 11.1 0.0 18 64 33 76 23 206 0.84 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 3_4 - 301 N6_N4_Mtase PF01555.13 231 1.9e-62 204.2 0.0 1 1 1.6e-64 2.3e-62 203.9 0.0 1 229 45 283 45 285 0.96 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 1_25 - 210 AAA_17 PF13207.1 121 7.2e-07 23.5 0.0 1 1 1.5e-08 1.1e-06 23.0 0.0 9 78 12 92 11 148 0.62 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 6_2 - 490 AAA_17 PF13207.1 121 0.00043 14.6 0.0 1 1 1.3e-05 0.00097 13.4 0.0 2 64 38 103 37 172 0.74 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_25 - 210 MobB PF03205.9 140 7.2e-05 16.0 0.0 1 1 2.3e-06 0.00017 14.7 0.0 10 112 12 95 3 111 0.74 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 2_8 - 213 MobB PF03205.9 140 0.0007 12.8 0.1 1 1 1.8e-05 0.0013 11.9 0.1 6 42 8 42 3 104 0.83 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 LpxK PF02606.9 326 0.00023 13.6 0.1 1 1 5.2e-06 0.00038 12.9 0.1 37 96 3 60 1 103 0.79 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 2_8 - 213 LpxK PF02606.9 326 0.0005 12.5 0.5 1 1 1.8e-05 0.0013 11.1 0.2 44 69 9 34 7 37 0.92 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 ArsA_ATPase PF02374.10 305 2e-06 20.4 0.1 1 1 4.8e-08 3.5e-06 19.6 0.0 6 46 7 47 1 63 0.84 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 2_8 - 213 ArsA_ATPase PF02374.10 305 2.2e-06 20.3 1.6 1 2 4.5e-07 3.3e-05 16.4 0.4 9 42 10 43 2 60 0.90 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 2_8 - 213 ArsA_ATPase PF02374.10 305 2.2e-06 20.3 1.6 2 2 0.0072 0.52 2.6 0.0 123 136 74 87 61 91 0.81 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 6_2 - 490 PhoH PF02562.11 205 3.7e-10 32.8 0.6 1 2 3e-07 4.4e-05 16.2 0.1 5 46 19 61 17 79 0.79 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 PhoH PF02562.11 205 3.7e-10 32.8 0.6 2 2 1.2e-06 0.00017 14.3 0.0 119 161 102 145 90 171 0.85 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_6 - 417 T2SE PF00437.15 272 0.0002 13.7 0.0 1 1 2.4e-06 0.00035 12.9 0.0 129 161 27 59 17 64 0.82 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 1_25 - 210 SKI PF01202.17 158 0.0013 12.0 0.1 1 1 1.5e-05 0.0022 11.3 0.1 2 22 12 32 11 38 0.91 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 2_8 - 213 Methyltransf_24 PF13578.1 106 2.9e-06 21.5 0.1 1 1 4.1e-08 6.1e-06 20.5 0.1 7 90 13 99 11 112 0.69 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_6 - 417 Zeta_toxin PF06414.7 201 0.00029 13.4 0.0 1 1 4.4e-06 0.00064 12.3 0.0 19 43 29 53 20 63 0.81 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 2_8 - 213 VirC1 PF07015.6 231 7.3e-11 35.0 0.3 1 1 1.5e-12 1.1e-10 34.4 0.3 1 130 1 124 1 179 0.76 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 VirC1 PF07015.6 231 5.4e-07 22.3 0.0 1 1 1.3e-08 9.4e-07 21.5 0.0 1 150 1 142 1 188 0.80 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 2_8 - 213 Fer4_NifH PF00142.13 273 0.00042 13.0 0.0 1 2 0.00024 0.017 7.7 0.0 7 40 9 42 2 80 0.84 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 2_8 - 213 Fer4_NifH PF00142.13 273 0.00042 13.0 0.0 2 2 0.0047 0.34 3.4 0.0 189 245 143 200 131 207 0.82 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 Fer4_NifH PF00142.13 273 0.00043 12.9 0.0 1 2 3.7e-05 0.0027 10.3 0.0 6 40 8 42 2 65 0.88 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 1_25 - 210 Fer4_NifH PF00142.13 273 0.00043 12.9 0.0 2 2 0.035 2.5 0.6 0.0 220 247 179 206 98 208 0.81 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 6_2 - 490 Arch_ATPase PF01637.13 234 0.0003 14.0 0.1 1 2 1.3e-05 0.002 11.3 0.0 10 120 26 133 23 163 0.74 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 Arch_ATPase PF01637.13 234 0.0003 14.0 0.1 2 2 0.068 9.9 -0.8 0.1 46 96 418 464 408 476 0.65 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 AAA_16 PF13191.1 185 1.1e-05 18.9 0.1 1 1 3.8e-07 2.8e-05 17.6 0.0 20 131 31 132 20 176 0.64 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_25 - 210 AAA_16 PF13191.1 185 0.00049 13.5 0.0 1 2 6.3e-05 0.0046 10.4 0.0 34 70 12 49 10 59 0.86 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 1_25 - 210 AAA_16 PF13191.1 185 0.00049 13.5 0.0 2 2 0.049 3.6 0.9 0.0 52 86 96 129 81 205 0.71 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 6_4 - 516 AAA_23 PF13476.1 202 0.0001 16.1 0.0 1 1 1.1e-06 0.00017 15.4 0.0 21 49 127 155 118 238 0.84 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 6_2 - 490 AAA_18 PF13238.1 129 0.00027 14.7 0.1 1 1 1.2e-05 0.0018 12.1 0.0 1 42 38 91 38 122 0.68 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 8_4 - 195 AAA_13 PF13166.1 712 0.00016 13.6 5.0 1 1 2.5e-06 0.00018 13.4 5.0 334 471 20 181 6 187 0.72 # 3371 # 3955 # 1 # ID=8_4;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.624 6_8 - 127 AAA_13 PF13166.1 712 0.0016 10.3 0.1 1 1 2.7e-05 0.0019 10.0 0.1 269 336 24 89 22 103 0.74 # 6804 # 7184 # 1 # ID=6_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.643 1_25 - 210 CbiA PF01656.18 195 2.3e-30 98.9 0.4 1 1 1.5e-31 4.3e-30 98.0 0.4 1 188 4 169 4 175 0.73 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 2_8 - 213 CbiA PF01656.18 195 6.9e-28 90.8 0.3 1 1 3.9e-29 1.1e-27 90.1 0.3 1 190 4 167 4 174 0.79 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_3 - 243 CbiA PF01656.18 195 1.1e-08 28.1 0.0 1 1 5.7e-10 1.7e-08 27.6 0.0 3 49 8 57 6 156 0.72 # 625 # 1353 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 6_7 - 234 CbiA PF01656.18 195 1.3e-06 21.4 2.7 1 2 2.8e-05 0.00082 12.2 0.2 1 20 3 22 3 31 0.94 # 6088 # 6789 # 1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 6_7 - 234 CbiA PF01656.18 195 1.3e-06 21.4 2.7 2 2 0.00025 0.0074 9.1 0.2 111 161 87 137 25 145 0.73 # 6088 # 6789 # 1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 6_4 - 516 CbiA PF01656.18 195 7e-05 15.7 0.0 1 1 3.7e-06 0.00011 15.1 0.0 4 46 130 172 128 268 0.81 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 6_4 - 516 AAA_14 PF13173.1 128 9.2e-05 15.8 0.0 1 2 5.3e-05 0.0077 9.6 0.0 6 85 129 209 124 217 0.73 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 6_4 - 516 AAA_14 PF13173.1 128 9.2e-05 15.8 0.0 2 2 0.0039 0.56 3.6 0.0 61 100 350 389 309 403 0.76 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 6_4 - 516 AAA_29 PF13555.1 62 0.0006 12.8 0.0 1 1 1.2e-05 0.0018 11.3 0.0 17 40 119 142 113 154 0.82 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 6_2 - 490 AAA PF00004.24 132 3.6e-05 17.4 0.1 1 1 6.8e-07 0.0001 16.0 0.1 4 74 41 117 38 165 0.73 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_4 - 155 KH_3 PF13014.1 43 0.00048 13.3 0.2 1 2 0.0038 0.56 3.5 0.0 11 25 5 19 3 19 0.88 # 1356 # 1820 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.613 1_4 - 155 KH_3 PF13014.1 43 0.00048 13.3 0.2 2 2 0.00024 0.035 7.3 0.1 9 24 57 72 56 73 0.92 # 1356 # 1820 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.613 2_14 - 684 TraG-D_C PF12696.2 128 1.3e-28 92.9 0.0 1 1 3.9e-30 1.9e-28 92.3 0.0 1 127 411 532 411 533 0.84 # 10828 # 12879 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 1_6 - 417 TraG-D_C PF12696.2 128 2.6e-27 88.7 0.1 1 1 7.7e-29 3.8e-27 88.2 0.1 3 127 254 384 252 385 0.86 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 6_4 - 516 TraG-D_C PF12696.2 128 7.7e-27 87.2 0.0 1 1 2.6e-28 1.3e-26 86.5 0.0 2 128 352 475 351 475 0.87 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 2_8 - 213 AAA_31 PF13614.1 157 1.6e-09 31.3 0.0 1 2 1.1e-05 0.00083 12.7 0.1 9 42 10 43 2 57 0.82 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 2_8 - 213 AAA_31 PF13614.1 157 1.6e-09 31.3 0.0 2 2 6.1e-07 4.5e-05 16.9 0.0 102 153 61 112 50 116 0.82 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 AAA_31 PF13614.1 157 2.4e-09 30.8 0.0 1 2 2.9e-10 2.1e-08 27.7 0.0 2 41 3 42 2 46 0.93 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 1_25 - 210 AAA_31 PF13614.1 157 2.4e-09 30.8 0.0 2 2 0.053 3.9 0.8 0.0 119 154 77 111 68 114 0.79 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 1_25 - 210 KTI12 PF08433.5 270 0.00046 12.9 0.0 1 1 4.6e-06 0.00067 12.3 0.0 11 46 12 47 6 85 0.70 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 3_4 - 301 Methyltransf_26 PF13659.1 117 2.1e-13 43.8 0.0 1 2 3.8e-07 5.5e-05 16.6 0.0 54 113 28 98 21 102 0.70 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 3_4 - 301 Methyltransf_26 PF13659.1 117 2.1e-13 43.8 0.0 2 2 9.4e-10 1.4e-07 25.0 0.0 2 46 247 290 246 299 0.90 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 6_2 - 490 AAA_30 PF13604.1 196 1e-54 178.5 5.5 1 1 1.4e-56 2e-54 177.6 5.5 2 184 19 193 18 199 0.97 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_4 - 516 FtsK_SpoIIIE PF01580.13 205 4.9e-05 16.3 0.0 1 1 1.5e-06 0.00011 15.1 0.0 38 79 119 162 100 173 0.79 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_6 - 417 FtsK_SpoIIIE PF01580.13 205 0.00021 14.2 0.0 1 1 5.2e-06 0.00038 13.4 0.0 37 62 25 50 8 73 0.80 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 1 14 0.0092 0.27 4.5 0.0 22 52 23 55 18 64 0.78 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 2 14 0.014 0.4 4.0 0.0 22 52 57 89 54 98 0.78 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 3 14 0.008 0.23 4.7 0.0 22 52 91 123 90 131 0.78 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 4 14 0.0082 0.24 4.7 0.0 22 51 125 156 124 166 0.72 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 5 14 0.007 0.2 4.9 0.0 22 50 159 189 154 200 0.74 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 6 14 0.0072 0.21 4.9 0.0 22 51 193 224 188 234 0.74 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 7 14 0.0077 0.23 4.8 0.0 22 50 227 257 225 268 0.72 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 8 14 0.021 0.61 3.4 0.0 22 50 261 291 255 301 0.76 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 9 14 0.0067 0.19 5.0 0.0 22 50 295 325 290 336 0.73 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 10 14 0.0074 0.21 4.9 0.0 22 50 329 359 326 370 0.73 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 11 14 0.077 2.2 1.6 0.1 22 46 363 387 360 404 0.72 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 12 14 0.058 1.7 2.0 0.1 26 52 435 463 425 472 0.77 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 13 14 0.019 0.57 3.5 0.0 26 49 469 494 459 502 0.74 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 10_1 - 532 RBD PF02196.10 71 7.2e-18 57.6 15.1 14 14 0.0071 0.21 4.9 0.0 22 51 499 530 495 532 0.79 # 3 # 1598 # -1 # ID=10_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.684 9_1 - 905 RBD PF02196.10 71 2.5e-10 33.5 7.1 1 7 0.026 0.75 3.1 0.0 26 50 85 111 79 122 0.70 # 106 # 2820 # -1 # ID=9_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.657 9_1 - 905 RBD PF02196.10 71 2.5e-10 33.5 7.1 2 7 0.046 1.3 2.3 0.0 22 41 115 134 113 149 0.77 # 106 # 2820 # -1 # ID=9_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.657 9_1 - 905 RBD PF02196.10 71 2.5e-10 33.5 7.1 3 7 0.031 0.89 2.9 0.0 22 45 149 172 145 183 0.75 # 106 # 2820 # -1 # ID=9_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.657 9_1 - 905 RBD PF02196.10 71 2.5e-10 33.5 7.1 4 7 0.0065 0.19 5.0 0.0 21 42 182 203 178 232 0.81 # 106 # 2820 # -1 # ID=9_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.657 9_1 - 905 RBD PF02196.10 71 2.5e-10 33.5 7.1 5 7 0.016 0.47 3.7 0.0 22 51 387 417 384 423 0.77 # 106 # 2820 # -1 # ID=9_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.657 9_1 - 905 RBD PF02196.10 71 2.5e-10 33.5 7.1 6 7 0.008 0.23 4.7 0.0 22 52 420 452 418 466 0.79 # 106 # 2820 # -1 # ID=9_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.657 9_1 - 905 RBD PF02196.10 71 2.5e-10 33.5 7.1 7 7 0.0087 0.26 4.6 0.0 22 52 556 588 553 597 0.80 # 106 # 2820 # -1 # ID=9_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.657 19_1 - 163 RBD PF02196.10 71 2.9e-10 33.3 1.4 1 5 0.00081 0.024 7.9 0.0 22 52 8 40 6 48 0.79 # 3 # 491 # 1 # ID=19_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.693 19_1 - 163 RBD PF02196.10 71 2.9e-10 33.3 1.4 2 5 0.01 0.3 4.4 0.0 22 51 42 73 39 83 0.73 # 3 # 491 # 1 # ID=19_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.693 19_1 - 163 RBD PF02196.10 71 2.9e-10 33.3 1.4 3 5 0.00067 0.02 8.2 0.0 22 52 76 108 73 117 0.78 # 3 # 491 # 1 # ID=19_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.693 19_1 - 163 RBD PF02196.10 71 2.9e-10 33.3 1.4 4 5 0.00067 0.02 8.2 0.0 22 52 110 142 107 151 0.78 # 3 # 491 # 1 # ID=19_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.693 19_1 - 163 RBD PF02196.10 71 2.9e-10 33.3 1.4 5 5 0.027 0.8 3.0 0.0 22 40 144 162 142 163 0.84 # 3 # 491 # 1 # ID=19_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.693 16_1 - 250 RBD PF02196.10 71 1.3e-09 31.1 1.0 1 5 0.021 0.61 3.4 0.0 22 49 81 110 78 121 0.73 # 3 # 752 # 1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.663 16_1 - 250 RBD PF02196.10 71 1.3e-09 31.1 1.0 2 5 0.0055 0.16 5.3 0.0 22 50 115 145 114 155 0.72 # 3 # 752 # 1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.663 16_1 - 250 RBD PF02196.10 71 1.3e-09 31.1 1.0 3 5 0.0013 0.039 7.2 0.0 22 52 149 181 146 190 0.78 # 3 # 752 # 1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.663 16_1 - 250 RBD PF02196.10 71 1.3e-09 31.1 1.0 4 5 0.0043 0.13 5.6 0.0 22 49 183 212 181 219 0.74 # 3 # 752 # 1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.663 16_1 - 250 RBD PF02196.10 71 1.3e-09 31.1 1.0 5 5 0.0026 0.077 6.3 0.0 22 51 217 248 213 250 0.80 # 3 # 752 # 1 # ID=16_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.663 13_1 - 450 RBD PF02196.10 71 1.2e-06 21.7 1.5 1 5 0.028 0.83 3.0 0.0 29 52 7 32 4 41 0.76 # 16 # 1365 # -1 # ID=13_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.653 13_1 - 450 RBD PF02196.10 71 1.2e-06 21.7 1.5 2 5 0.0079 0.23 4.8 0.0 22 52 34 66 31 75 0.78 # 16 # 1365 # -1 # ID=13_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.653 13_1 - 450 RBD PF02196.10 71 1.2e-06 21.7 1.5 3 5 0.022 0.65 3.3 0.1 22 52 68 100 65 109 0.77 # 16 # 1365 # -1 # ID=13_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.653 13_1 - 450 RBD PF02196.10 71 1.2e-06 21.7 1.5 4 5 0.024 0.69 3.2 0.0 22 47 102 127 99 138 0.75 # 16 # 1365 # -1 # ID=13_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.653 13_1 - 450 RBD PF02196.10 71 1.2e-06 21.7 1.5 5 5 0.018 0.51 3.6 0.0 22 44 136 158 133 170 0.75 # 16 # 1365 # -1 # ID=13_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.653 6_2 - 490 AAA_19 PF13245.1 76 4e-09 29.6 0.1 1 2 1.2e-08 4.5e-07 23.0 0.0 2 76 26 93 25 93 0.83 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 AAA_19 PF13245.1 76 4e-09 29.6 0.1 2 2 0.021 0.78 3.1 0.0 30 61 209 241 207 258 0.85 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_6 - 417 AAA_19 PF13245.1 76 3.6e-05 17.0 0.1 1 1 4.6e-06 0.00017 14.8 0.0 16 59 32 71 22 87 0.81 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 2_8 - 213 AAA_19 PF13245.1 76 0.00049 13.3 3.3 1 2 0.00015 0.0055 9.9 0.5 20 49 12 39 10 63 0.80 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 2_8 - 213 AAA_19 PF13245.1 76 0.00049 13.3 3.3 2 2 0.017 0.63 3.4 0.1 1 19 68 87 68 129 0.90 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 AAA_19 PF13245.1 76 0.00098 12.4 1.4 1 1 0.00012 0.0044 10.3 0.1 20 52 12 42 4 70 0.74 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 6_2 - 490 Helicase_RecD PF05127.9 177 0.00017 14.7 2.1 1 2 0.00083 0.12 5.4 0.1 123 145 40 62 23 88 0.75 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 Helicase_RecD PF05127.9 177 0.00017 14.7 2.1 2 2 0.00012 0.017 8.2 0.1 81 113 95 125 73 136 0.72 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_6 - 417 AAA_10 PF12846.2 304 3.3e-14 46.4 0.0 1 2 1.5e-08 5.6e-07 22.7 0.0 2 47 27 73 26 167 0.87 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 1_6 - 417 AAA_10 PF12846.2 304 3.3e-14 46.4 0.0 2 2 5.1e-08 1.9e-06 20.9 0.0 217 300 248 331 224 335 0.81 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 6_4 - 516 AAA_10 PF12846.2 304 8.7e-11 35.2 0.1 1 1 2.8e-10 1e-08 28.4 0.1 1 293 125 422 125 435 0.62 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_3 - 243 AAA_10 PF12846.2 304 3.9e-06 19.9 0.1 1 1 2.3e-07 8.5e-06 18.8 0.1 3 67 6 79 4 123 0.80 # 625 # 1353 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_25 - 210 AAA_10 PF12846.2 304 0.00042 13.2 0.0 1 1 1.5e-05 0.00054 12.9 0.0 11 54 12 57 10 98 0.89 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 6_2 - 490 ResIII PF04851.10 184 0.00056 13.2 0.4 1 2 0.00011 0.016 8.4 0.1 3 54 18 67 16 79 0.79 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 ResIII PF04851.10 184 0.00056 13.2 0.4 2 2 0.0054 0.79 2.9 0.0 137 162 88 118 62 137 0.69 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 3_4 - 301 Methyltransf_31 PF13847.1 152 0.00036 13.6 0.0 1 2 0.037 5.3 0.0 0.0 88 109 78 99 70 127 0.86 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 3_4 - 301 Methyltransf_31 PF13847.1 152 0.00036 13.6 0.0 2 2 1.4e-05 0.0021 11.1 0.0 4 54 246 293 243 300 0.86 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 6_2 - 490 Viral_helicase1 PF01443.13 234 2.3e-13 43.6 0.3 1 2 2.1e-08 3e-06 20.3 0.0 3 116 40 156 38 227 0.73 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 Viral_helicase1 PF01443.13 234 2.3e-13 43.6 0.3 2 2 8.7e-09 1.3e-06 21.5 0.1 143 234 357 440 318 440 0.72 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_6 - 417 DEAD PF00270.24 169 0.00014 14.9 0.0 1 1 3.1e-06 0.00046 13.1 0.0 7 52 19 62 14 210 0.75 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 6_4 - 516 DUF853 PF05872.7 504 0.00032 12.5 0.0 1 1 6.8e-06 0.00049 11.9 0.0 13 69 117 174 105 189 0.86 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_6 - 417 DUF853 PF05872.7 504 0.00077 11.3 0.0 1 1 1.6e-05 0.0011 10.7 0.0 14 68 19 74 11 78 0.82 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 6_4 - 516 TrwB_AAD_bind PF10412.4 386 1.4e-129 425.5 0.0 1 1 3.4e-131 1.7e-129 425.2 0.0 1 384 111 492 111 494 0.98 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_6 - 417 TrwB_AAD_bind PF10412.4 386 2.6e-128 421.3 0.0 1 1 6.3e-130 3.1e-128 421.0 0.0 2 384 13 401 12 403 0.98 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 2_14 - 684 TrwB_AAD_bind PF10412.4 386 5.9e-29 94.2 0.0 1 1 2e-30 9.6e-29 93.5 0.0 44 386 183 552 158 552 0.87 # 10828 # 12879 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 6_2 - 490 AAA_11 PF13086.1 236 3.5e-06 20.2 1.6 1 2 2.6e-06 0.00038 13.5 0.0 2 34 19 52 18 78 0.86 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 AAA_11 PF13086.1 236 3.5e-06 20.2 1.6 2 2 0.00095 0.14 5.1 0.0 175 228 86 141 70 146 0.67 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 19_1 - 163 UvrB PF12344.3 44 0.00036 13.5 0.0 1 4 0.014 2 1.6 0.0 29 39 18 28 17 31 0.87 # 3 # 491 # 1 # ID=19_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.693 19_1 - 163 UvrB PF12344.3 44 0.00036 13.5 0.0 2 4 0.0072 1 2.4 0.0 29 39 86 96 85 99 0.88 # 3 # 491 # 1 # ID=19_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.693 19_1 - 163 UvrB PF12344.3 44 0.00036 13.5 0.0 3 4 0.0072 1 2.4 0.0 29 39 120 130 119 133 0.88 # 3 # 491 # 1 # ID=19_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.693 19_1 - 163 UvrB PF12344.3 44 0.00036 13.5 0.0 4 4 0.025 3.6 0.7 0.0 29 38 154 163 153 163 0.87 # 3 # 491 # 1 # ID=19_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.693 2_14 - 684 T4SS-DNA_transf PF02534.9 469 8.8e-105 344.3 0.0 1 1 2.4e-106 1.1e-104 343.9 0.0 1 456 122 563 122 573 0.92 # 10828 # 12879 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 1_6 - 417 T4SS-DNA_transf PF02534.9 469 1.1e-24 80.2 0.0 1 2 0.0019 0.091 4.7 0.0 45 182 27 152 9 183 0.69 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 1_6 - 417 T4SS-DNA_transf PF02534.9 469 1.1e-24 80.2 0.0 2 2 3.2e-24 1.6e-22 73.1 0.0 302 429 249 388 218 404 0.86 # 2161 # 3411 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.621 6_4 - 516 T4SS-DNA_transf PF02534.9 469 9.3e-21 67.3 0.0 1 2 9.3e-06 0.00045 12.2 0.0 44 166 125 237 96 294 0.72 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 6_4 - 516 T4SS-DNA_transf PF02534.9 469 9.3e-21 67.3 0.0 2 2 3.8e-18 1.9e-16 53.1 0.0 301 440 350 489 300 498 0.83 # 3358 # 4905 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.613 6_2 - 490 PIF1 PF05970.9 364 3.5e-08 26.1 0.1 1 2 1.7e-09 2.5e-07 23.3 0.1 2 61 19 74 18 114 0.86 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 PIF1 PF05970.9 364 3.5e-08 26.1 0.1 2 2 0.029 4.3 -0.5 0.0 333 362 335 363 326 365 0.84 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 2_8 - 213 GTP_EFTU PF00009.22 188 0.00022 14.1 0.0 1 1 2.3e-06 0.00033 13.5 0.0 14 99 13 105 8 109 0.74 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_25 - 210 AAA_24 PF13479.1 213 7e-06 19.2 0.1 1 1 8.5e-08 1.2e-05 18.4 0.1 11 90 10 97 2 101 0.69 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 2_8 - 213 AAA_25 PF13481.1 194 0.0026 10.6 3.7 1 1 8.9e-05 0.013 8.3 2.6 37 150 6 85 1 95 0.62 # 4612 # 5250 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 3_4 - 301 Methyltransf_15 PF09445.5 164 0.0011 12.0 0.0 1 2 0.00013 0.019 7.9 0.0 54 98 29 73 25 91 0.78 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 3_4 - 301 Methyltransf_15 PF09445.5 164 0.0011 12.0 0.0 2 2 0.0095 1.4 1.9 0.0 3 38 248 283 246 298 0.81 # 1870 # 2772 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.579 6_2 - 490 Herpes_Helicase PF02689.9 819 0.00039 11.6 0.2 1 2 0.00066 0.096 3.7 0.0 169 212 76 120 48 124 0.80 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 6_2 - 490 Herpes_Helicase PF02689.9 819 0.00039 11.6 0.2 2 2 0.00015 0.022 5.9 0.1 743 785 395 438 390 455 0.88 # 492 # 1961 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_3 - 243 AAA_5 PF07728.9 139 0.0013 11.9 0.3 1 2 6.6e-05 0.0097 9.1 0.1 1 25 6 30 6 48 0.86 # 625 # 1353 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_3 - 243 AAA_5 PF07728.9 139 0.0013 11.9 0.3 2 2 0.053 7.7 -0.3 0.0 91 124 55 114 41 121 0.63 # 625 # 1353 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_25 - 210 APS_kinase PF01583.15 157 0.00042 13.4 0.0 1 1 6.1e-06 0.0009 12.4 0.0 10 39 10 39 2 53 0.89 # 15783 # 16412 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.651 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/271a7c02-0c2c-47b2-b144-181131a9a233 # Target file: checkm_output/bins/pGCA_000969685.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000969685.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/271a7c02-0c2c-47b2-b144-181131a9a233 checkm_output/bins/pGCA_000969685.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:43:33 2020 # [ok]