# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 18_3 - 226 UPF0020 PF01170.13 180 7.3e-05 17.5 0.0 1 1 8.5e-07 0.0002 16.1 0.0 32 153 36 147 22 164 0.78 # 852 # 1529 # 1 # ID=18_3;partial=01;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.370 6_3 - 364 UPF0020 PF01170.13 180 0.00022 15.9 0.0 1 1 4.5e-06 0.001 13.7 0.0 31 153 35 147 20 165 0.75 # 2053 # 3144 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.377 2_48 - 633 cobW PF02492.14 178 0.0042 11.6 0.2 1 2 0.012 5.7 1.4 0.1 107 144 126 163 113 165 0.84 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_48 - 633 cobW PF02492.14 178 0.0042 11.6 0.2 2 2 0.00014 0.065 7.7 0.0 4 33 248 278 245 308 0.76 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_25 - 251 IstB_IS21 PF01695.12 178 2.7e-74 243.5 0.0 1 1 1.6e-76 3.8e-74 243.0 0.0 2 178 56 232 55 232 0.99 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_71 - 294 IstB_IS21 PF01695.12 178 0.0018 12.7 0.3 1 2 0.0042 0.98 3.9 0.1 51 70 33 52 25 67 0.77 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 1_71 - 294 IstB_IS21 PF01695.12 178 0.0018 12.7 0.3 2 2 0.00053 0.12 6.8 0.0 105 149 149 192 139 208 0.83 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 1_39 - 273 MipZ PF09140.6 261 0.00027 15.1 0.0 1 1 9.6e-07 0.00044 14.4 0.0 11 135 16 135 6 168 0.71 # 46563 # 47381 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.370 2_25 - 251 AAA_2 PF07724.9 171 0.0017 13.3 0.0 1 1 1.3e-05 0.003 12.6 0.0 3 67 101 164 99 172 0.82 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_40 - 478 AAA_2 PF07724.9 171 0.0038 12.2 2.0 1 1 7.6e-05 0.018 10.0 0.0 2 42 234 276 233 285 0.84 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_48 - 633 DUF87 PF01935.12 229 9.4e-10 33.7 0.0 1 1 4.5e-11 3.5e-09 31.9 0.0 27 70 248 289 243 383 0.87 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 5_17 - 703 DUF87 PF01935.12 229 1e-07 27.1 2.9 1 1 5.1e-09 3.9e-07 25.1 0.2 26 102 285 355 283 640 0.73 # 12159 # 14267 # 1 # ID=5_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.370 3_41 - 628 DUF87 PF01935.12 229 4.6e-07 24.9 0.2 1 1 6e-09 4.6e-07 24.9 0.2 14 86 242 327 230 476 0.59 # 36899 # 38782 # 1 # ID=3_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.311 2_43 - 649 DUF87 PF01935.12 229 0.00017 16.5 0.0 1 1 4.3e-06 0.00033 15.6 0.0 24 69 151 200 146 286 0.76 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 1_40 - 478 DUF87 PF01935.12 229 0.00019 16.4 0.5 1 1 7.7e-06 0.0006 14.7 0.1 25 57 237 270 228 274 0.83 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_58 - 492 DUF87 PF01935.12 229 0.00087 14.2 0.3 1 1 0.00012 0.009 10.9 0.0 24 48 241 265 222 274 0.83 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 5_40 - 69 NB-ARC PF00931.17 287 0.001 13.0 0.8 1 1 2.3e-06 0.0011 12.9 0.8 9 40 15 51 7 59 0.73 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 2_25 - 251 AAA_22 PF13401.1 131 9.9e-07 24.0 0.5 1 2 3.9e-05 0.0031 12.8 0.1 3 26 100 123 95 145 0.75 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_25 - 251 AAA_22 PF13401.1 131 9.9e-07 24.0 0.5 2 2 0.00034 0.026 9.7 0.1 55 104 137 183 121 206 0.63 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_3 - 638 AAA_22 PF13401.1 131 2.6e-05 19.5 0.0 1 1 2e-06 0.00015 17.0 0.0 7 68 118 175 112 310 0.80 # 3095 # 5008 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.252 1_40 - 478 AAA_22 PF13401.1 131 4.2e-05 18.8 0.0 1 1 1.7e-06 0.00013 17.2 0.0 6 69 237 325 231 382 0.85 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_48 - 633 AAA_22 PF13401.1 131 0.0001 17.5 0.0 1 1 8.7e-06 0.00067 14.9 0.0 5 29 245 269 239 297 0.82 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_58 - 492 AAA_22 PF13401.1 131 0.0023 13.2 0.0 1 1 0.0002 0.015 10.5 0.0 4 25 240 261 234 294 0.90 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 1_71 - 294 AAA_22 PF13401.1 131 0.0047 12.2 0.2 1 1 0.00016 0.013 10.8 0.2 5 26 30 51 25 190 0.80 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 1_28 - 182 DUF1611 PF07755.6 301 0.0018 12.0 1.2 1 1 6e-06 0.0028 11.4 0.8 47 98 107 158 101 175 0.83 # 33081 # 33626 # -1 # ID=1_28;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.322 5_40 - 69 PRK PF00485.13 194 0.0053 11.4 0.4 1 1 1.4e-05 0.0066 11.1 0.4 1 20 32 51 32 63 0.89 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 2_15 - 404 ATP_bind_2 PF03668.10 284 0.0014 12.8 0.0 1 1 6.4e-06 0.003 11.7 0.0 31 102 283 354 280 365 0.94 # 11349 # 12560 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_17 - 364 DNA_pol3_delta2 PF13177.1 162 0.0035 12.1 0.0 1 1 1.9e-05 0.009 10.7 0.0 52 112 52 214 28 219 0.84 # 13721 # 14812 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 1_3 - 638 KAP_NTPase PF07693.9 325 2.5e-06 21.7 4.3 1 1 2.2e-07 0.0001 16.4 4.3 6 183 103 280 99 397 0.55 # 3095 # 5008 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.252 9_3 - 511 AAA_15 PF13175.1 415 9.4e-20 66.0 39.2 1 1 9.8e-22 1.5e-19 65.3 31.5 1 415 3 409 3 409 0.75 # 1751 # 3283 # -1 # ID=9_3;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.297 5_40 - 69 AAA_15 PF13175.1 415 0.0049 11.0 0.1 1 1 3.2e-05 0.0049 11.0 0.1 17 43 22 51 6 66 0.74 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 1_71 - 294 AAA_15 PF13175.1 415 0.0078 10.3 0.0 1 2 0.0057 0.88 3.5 0.0 26 43 33 52 3 93 0.79 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 1_71 - 294 AAA_15 PF13175.1 415 0.0078 10.3 0.0 2 2 0.0024 0.37 4.8 0.0 372 411 155 192 140 193 0.87 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 2_58 - 492 AAA_17 PF13207.1 121 5.9e-06 22.2 1.0 1 1 6.2e-07 4.8e-05 19.3 0.0 1 77 242 325 242 412 0.65 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_48 - 633 AAA_17 PF13207.1 121 4.8e-05 19.2 0.1 1 1 2.6e-06 0.0002 17.3 0.0 4 46 249 294 246 374 0.65 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 1_40 - 478 AAA_17 PF13207.1 121 9.8e-05 18.3 0.7 1 1 4.8e-06 0.00037 16.4 0.1 2 23 238 259 237 457 0.79 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_25 - 251 AAA_17 PF13207.1 121 0.00058 15.8 0.8 1 1 1.8e-05 0.0014 14.5 0.4 2 63 104 173 103 243 0.61 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 3_20 - 430 AAA_17 PF13207.1 121 0.0039 13.1 0.3 1 1 0.00071 0.055 9.4 0.0 8 78 158 247 151 321 0.59 # 15747 # 17036 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.317 3_41 - 628 AAA_17 PF13207.1 121 0.016 11.1 2.3 1 1 0.0014 0.11 8.4 0.2 3 15 255 267 255 270 0.90 # 36899 # 38782 # 1 # ID=3_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.311 9_3 - 511 AAA_21 PF13304.1 303 6.5e-21 70.6 25.1 1 1 2.3e-22 3.5e-20 68.2 19.3 1 302 35 409 35 410 0.76 # 1751 # 3283 # -1 # ID=9_3;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.297 1_71 - 294 AAA_21 PF13304.1 303 2.1e-13 45.9 0.0 1 2 5.1e-07 8e-05 17.8 0.0 3 25 33 62 31 105 0.70 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 1_71 - 294 AAA_21 PF13304.1 303 2.1e-13 45.9 0.0 2 2 1.3e-09 2e-07 26.3 0.0 233 297 131 191 112 193 0.88 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 5_40 - 69 AAA_21 PF13304.1 303 0.00013 17.1 0.4 1 1 1e-06 0.00015 16.8 0.4 2 23 33 54 32 64 0.85 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 2_58 - 492 Miro PF08477.8 119 0.00059 15.4 0.0 1 1 8.9e-06 0.0021 13.7 0.0 1 59 242 300 242 317 0.76 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_48 - 633 Miro PF08477.8 119 0.00095 14.7 0.0 1 1 2.9e-05 0.0068 12.0 0.0 2 26 247 273 246 328 0.74 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 1_39 - 273 MobB PF03205.9 140 0.00053 14.8 0.1 1 1 3.1e-06 0.0014 13.4 0.0 8 38 14 44 7 106 0.87 # 46563 # 47381 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.370 1_6 - 1051 Helicase_C PF00271.26 78 5.5e-08 27.7 0.1 1 1 1.4e-09 2.1e-07 25.8 0.0 10 78 573 645 567 645 0.88 # 6080 # 9232 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 21_1 - 288 Helicase_C PF00271.26 78 3e-05 18.9 0.0 1 1 3.3e-07 5e-05 18.2 0.0 13 78 120 185 108 185 0.85 # 2 # 865 # 1 # ID=21_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.395 20_1 - 335 Helicase_C PF00271.26 78 5.5e-05 18.1 0.0 1 1 6.1e-07 9.4e-05 17.3 0.0 16 78 123 185 108 185 0.86 # 2 # 1006 # 1 # ID=20_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.391 1_39 - 273 ArsA_ATPase PF02374.10 305 0.00077 13.6 0.1 1 1 5.1e-06 0.0012 13.0 0.1 12 45 17 53 8 221 0.73 # 46563 # 47381 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.370 2_25 - 251 ArsA_ATPase PF02374.10 305 0.0019 12.3 1.5 1 2 0.012 2.7 2.0 0.1 40 73 21 54 19 84 0.84 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_25 - 251 ArsA_ATPase PF02374.10 305 0.0019 12.3 1.5 2 2 6.8e-05 0.016 9.3 0.2 4 35 104 135 101 171 0.89 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_25 - 251 PhoH PF02562.11 205 2.3e-06 22.0 0.0 1 1 9.6e-09 4.4e-06 21.1 0.0 13 59 95 141 82 172 0.79 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_40 - 478 MCM PF00493.18 331 0.00016 15.6 0.0 1 1 7.3e-07 0.00034 14.5 0.0 54 84 232 262 218 268 0.89 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_25 - 251 AFG1_ATPase PF03969.11 362 5.6e-06 20.4 0.1 1 1 1.5e-08 7.1e-06 20.1 0.1 6 206 47 241 42 248 0.66 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_40 - 478 T2SE PF00437.15 272 9.9e-47 154.1 0.0 1 1 1.1e-48 1.7e-46 153.3 0.0 5 270 111 391 108 393 0.91 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_58 - 492 T2SE PF00437.15 272 2.7e-40 133.0 0.0 1 1 2.5e-42 3.9e-40 132.5 0.0 4 263 115 385 112 394 0.89 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 3_17 - 482 T2SE PF00437.15 272 9.2e-23 75.5 0.1 1 1 6e-25 9.2e-23 75.5 0.1 25 261 144 382 137 387 0.87 # 12356 # 13801 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.326 5_14 - 140 TIGR00810 TIGR00810 73 0.0014 13.5 3.1 1 1 5.5e-06 0.0025 12.6 3.1 20 72 47 96 26 97 0.89 # 10405 # 10824 # 1 # ID=5_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.445 1_31 - 509 AAA_26 PF13500.1 199 0.0024 12.6 0.0 1 1 1.5e-05 0.0071 11.0 0.0 1 34 235 268 235 353 0.86 # 38172 # 39698 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.345 9_3 - 511 SMC_N PF02463.14 220 1.6e-07 25.8 0.0 1 1 7.2e-08 1.1e-05 19.8 0.0 16 205 25 412 2 424 0.78 # 1751 # 3283 # -1 # ID=9_3;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.297 1_71 - 294 SMC_N PF02463.14 220 0.00043 14.6 0.1 1 2 1.7e-05 0.0026 12.0 0.0 16 42 21 47 10 53 0.83 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 1_71 - 294 SMC_N PF02463.14 220 0.00043 14.6 0.1 2 2 0.095 15 -0.2 0.0 161 204 155 198 136 210 0.76 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 2_55 - 143 SMC_N PF02463.14 220 0.002 12.4 0.1 1 1 1.4e-05 0.0022 12.3 0.1 92 150 37 94 18 138 0.71 # 54615 # 55043 # 1 # ID=2_55;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.350 11_1 - 423 TIGR02432 TIGR02432 189 0.00081 14.1 0.1 1 1 4e-06 0.0018 12.9 0.1 3 30 23 55 21 103 0.73 # 124 # 1392 # -1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.373 1_39 - 273 Fer4_NifH PF00142.13 273 0.0032 11.7 0.0 1 1 1.1e-05 0.005 11.1 0.0 2 43 7 49 6 85 0.74 # 46563 # 47381 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.370 2_25 - 251 AAA_16 PF13191.1 185 3.4e-05 18.9 0.0 1 1 3.7e-07 5.8e-05 18.2 0.0 23 72 100 146 85 230 0.79 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_71 - 294 AAA_16 PF13191.1 185 0.00068 14.7 0.0 1 1 1.1e-05 0.0016 13.5 0.0 26 81 31 84 23 189 0.67 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 2_48 - 633 AAA_16 PF13191.1 185 0.00094 14.3 0.0 1 1 3.3e-05 0.0052 11.8 0.0 18 46 238 266 231 297 0.85 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 9_3 - 511 AAA_23 PF13476.1 202 4.5e-07 25.4 10.9 1 1 2.9e-09 4.5e-07 25.4 10.9 1 196 5 221 5 253 0.54 # 1751 # 3283 # -1 # ID=9_3;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.297 5_40 - 69 AAA_23 PF13476.1 202 4.6e-05 18.9 0.6 1 1 3.4e-07 5.2e-05 18.7 0.6 13 40 21 51 13 59 0.82 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 1_71 - 294 AAA_23 PF13476.1 202 0.00054 15.4 0.0 1 1 5.7e-06 0.00088 14.7 0.0 11 39 21 49 10 53 0.83 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 1_40 - 478 AAA_18 PF13238.1 129 6.4e-05 18.3 0.0 1 1 5.4e-06 0.0005 15.5 0.0 1 36 238 280 238 360 0.67 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_58 - 492 AAA_18 PF13238.1 129 0.00017 17.0 1.3 1 1 8.6e-06 0.0008 14.8 0.0 1 42 243 297 243 347 0.66 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 3_20 - 430 AAA_18 PF13238.1 129 0.00081 14.8 0.0 1 1 5.3e-05 0.0049 12.3 0.0 7 92 158 253 157 278 0.66 # 15747 # 17036 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.317 2_48 - 633 AAA_18 PF13238.1 129 0.00087 14.7 0.5 1 1 3.2e-05 0.0029 13.0 0.1 2 37 248 288 247 410 0.69 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_25 - 251 AAA_18 PF13238.1 129 0.0026 13.2 0.8 1 1 0.00018 0.017 10.5 0.8 1 42 104 141 104 204 0.54 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 273 CbiA PF01656.18 195 1.3e-11 39.3 0.4 1 1 3.8e-13 3.6e-11 37.9 0.4 1 169 8 212 8 227 0.74 # 46563 # 47381 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.370 2_57 - 279 CbiA PF01656.18 195 1.1e-05 20.0 0.0 1 1 1.4e-07 1.3e-05 19.7 0.0 10 109 18 157 9 206 0.76 # 55886 # 56722 # 1 # ID=2_57;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.297 3_20 - 430 CbiA PF01656.18 195 8e-05 17.2 0.0 1 1 4.4e-06 0.00041 14.9 0.0 1 131 151 300 151 322 0.55 # 15747 # 17036 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.317 2_25 - 251 CbiA PF01656.18 195 0.00035 15.1 0.2 1 1 7.3e-06 0.00068 14.1 0.2 6 35 108 137 104 230 0.75 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_48 - 633 CbiA PF01656.18 195 0.0037 11.7 0.0 1 2 0.0068 0.63 4.4 0.0 9 63 254 320 247 381 0.67 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_48 - 633 CbiA PF01656.18 195 0.0037 11.7 0.0 2 2 0.017 1.6 3.1 0.0 123 167 455 504 434 532 0.71 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 1_40 - 478 IIGP PF05049.8 376 0.00078 13.4 0.1 1 2 0.027 12 -0.5 0.1 147 217 26 105 5 141 0.42 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 1_40 - 478 IIGP PF05049.8 376 0.00078 13.4 0.1 2 2 1e-05 0.0047 10.8 0.0 24 55 224 255 202 288 0.78 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 6_3 - 364 Methyltransf_25 PF13649.1 101 1.7e-05 20.2 0.0 1 1 2e-07 4.7e-05 18.8 0.0 3 73 38 103 36 136 0.85 # 2053 # 3144 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.377 18_3 - 226 Methyltransf_25 PF13649.1 101 3.4e-05 19.3 0.0 1 1 2.9e-07 6.7e-05 18.3 0.0 3 73 38 103 36 137 0.83 # 852 # 1529 # 1 # ID=18_3;partial=01;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.370 1_3 - 638 KaiC PF06745.8 227 0.00025 15.3 4.2 1 2 0.00011 0.049 7.8 0.0 17 40 113 136 101 152 0.85 # 3095 # 5008 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.252 1_3 - 638 KaiC PF06745.8 227 0.00025 15.3 4.2 2 2 0.00011 0.05 7.8 1.1 66 178 254 363 230 388 0.68 # 3095 # 5008 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.252 2_25 - 251 AAA_14 PF13173.1 128 1.2e-06 23.5 0.2 1 1 2.6e-08 3e-06 22.2 0.2 3 74 102 178 100 234 0.70 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 3_17 - 482 AAA_14 PF13173.1 128 5.7e-05 18.1 0.2 1 1 2.9e-06 0.00033 15.6 0.0 5 73 250 330 247 345 0.71 # 12356 # 13801 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.326 1_3 - 638 AAA_14 PF13173.1 128 7.2e-05 17.8 9.4 1 2 2e-05 0.0023 12.9 0.0 2 75 115 185 94 219 0.80 # 3095 # 5008 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.252 1_3 - 638 AAA_14 PF13173.1 128 7.2e-05 17.8 9.4 2 2 0.0014 0.16 7.0 2.4 28 113 233 320 225 331 0.70 # 3095 # 5008 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.252 2_48 - 633 AAA_14 PF13173.1 128 0.004 12.1 0.3 1 1 0.00016 0.019 10.0 0.0 3 40 245 283 243 299 0.84 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_48 - 633 TIGR03594 TIGR03594 432 0.00089 13.1 0.1 1 1 4.8e-06 0.0022 11.7 0.0 173 197 242 266 230 271 0.81 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 9_3 - 511 AAA_29 PF13555.1 62 0.00013 16.5 0.0 1 1 3.3e-06 0.00026 15.6 0.0 18 57 28 65 16 68 0.85 # 1751 # 3283 # -1 # ID=9_3;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.297 1_71 - 294 AAA_29 PF13555.1 62 0.00025 15.7 0.1 1 1 7.3e-06 0.00056 14.5 0.1 19 50 25 56 15 64 0.74 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 5_40 - 69 AAA_29 PF13555.1 62 0.00059 14.5 0.2 1 1 9.9e-06 0.00077 14.1 0.2 22 40 29 47 18 58 0.80 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 2_43 - 649 AAA_29 PF13555.1 62 0.0019 12.8 0.0 1 1 6.8e-05 0.0053 11.4 0.0 15 37 143 164 138 167 0.83 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 3_17 - 482 AAA_29 PF13555.1 62 0.0029 12.2 0.0 1 1 7.2e-05 0.0056 11.3 0.0 25 41 249 265 236 276 0.84 # 12356 # 13801 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.326 3_41 - 628 AAA_29 PF13555.1 62 0.0039 11.8 0.0 1 1 0.00013 0.0099 10.5 0.0 26 40 254 268 245 273 0.84 # 36899 # 38782 # 1 # ID=3_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.311 2_25 - 251 AAA PF00004.24 132 3.6e-07 25.5 0.0 1 1 2.5e-09 5.9e-07 24.8 0.0 2 70 105 174 104 213 0.76 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_48 - 633 AAA PF00004.24 132 0.00067 14.9 0.5 1 2 0.019 4.3 2.6 0.1 75 125 106 156 94 161 0.70 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_48 - 633 AAA PF00004.24 132 0.00067 14.9 0.5 2 2 0.0003 0.07 8.4 0.0 3 20 249 266 247 289 0.84 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_25 - 251 Bac_DnaA PF00308.13 219 2.2e-09 32.3 0.2 1 1 8e-12 3.7e-09 31.6 0.2 37 135 104 200 91 206 0.89 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 11_1 - 423 PAPS_reduct PF01507.14 174 4.2e-08 28.3 0.0 1 1 5.6e-10 2.6e-07 25.7 0.0 3 153 23 220 21 225 0.75 # 124 # 1392 # -1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.373 1_40 - 478 Sigma54_activat PF00158.21 168 1.7e-05 19.4 0.0 1 1 2.8e-07 4.3e-05 18.1 0.0 3 50 216 263 214 283 0.80 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_25 - 251 Sigma54_activat PF00158.21 168 0.00015 16.4 0.1 1 1 6.2e-06 0.00097 13.7 0.0 18 66 97 145 83 152 0.81 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_58 - 492 Sigma54_activat PF00158.21 168 0.002 12.7 0.0 1 1 2.4e-05 0.0037 11.8 0.0 4 39 222 257 219 269 0.83 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_48 - 633 MMR_HSR1 PF01926.18 116 0.00075 14.5 0.0 1 1 1.4e-05 0.0034 12.4 0.0 3 23 248 268 246 365 0.82 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 3_17 - 482 MMR_HSR1 PF01926.18 116 0.0038 12.2 0.4 1 1 4.8e-05 0.011 10.8 0.0 2 58 250 331 249 409 0.54 # 12356 # 13801 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.326 6_3 - 364 N6_Mtase PF02384.11 311 2.6e-06 21.8 1.0 1 2 1.2e-07 2.8e-05 18.4 0.1 26 140 10 111 5 144 0.76 # 2053 # 3144 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.377 6_3 - 364 N6_Mtase PF02384.11 311 2.6e-06 21.8 1.0 2 2 0.072 17 -0.6 0.1 234 270 189 224 176 249 0.58 # 2053 # 3144 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.377 18_3 - 226 N6_Mtase PF02384.11 311 3.2e-06 21.4 0.3 1 1 8.3e-08 1.9e-05 18.9 0.0 26 146 10 118 5 150 0.76 # 852 # 1529 # 1 # ID=18_3;partial=01;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.370 2_25 - 251 DUF258 PF03193.11 161 0.00023 15.5 0.0 1 1 3.7e-06 0.00043 14.6 0.0 28 56 94 122 70 174 0.75 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_40 - 478 DUF258 PF03193.11 161 0.00036 14.8 0.0 1 1 6.2e-06 0.00072 13.8 0.0 5 59 204 259 200 329 0.87 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 1_71 - 294 DUF258 PF03193.11 161 0.001 13.3 0.1 1 1 1.5e-05 0.0017 12.6 0.1 27 61 21 55 9 67 0.81 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 5_40 - 69 DUF258 PF03193.11 161 0.004 11.4 0.3 1 1 3.6e-05 0.0041 11.4 0.3 17 62 11 57 2 66 0.74 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 3_26 - 754 TraG-D_C PF12696.2 128 6.4e-39 127.8 0.2 1 1 1.8e-40 2.8e-38 125.7 0.1 3 127 406 530 404 531 0.92 # 22322 # 24583 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_43 - 649 TraG-D_C PF12696.2 128 1.2e-36 120.5 0.1 1 2 0.096 15 0.6 0.0 29 72 245 286 237 310 0.77 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 2_43 - 649 TraG-D_C PF12696.2 128 1.2e-36 120.5 0.1 2 2 7.8e-38 1.2e-35 117.2 0.0 3 127 429 546 427 547 0.89 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 1_21 - 667 TraG-D_C PF12696.2 128 9.4e-14 46.5 1.1 1 1 3.2e-15 5e-13 44.1 0.0 3 125 39 159 38 161 0.84 # 22541 # 24541 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.350 2_57 - 279 AAA_31 PF13614.1 157 2.2e-39 130.0 0.0 1 1 3.1e-41 2.9e-39 129.6 0.0 1 156 7 181 7 182 0.97 # 55886 # 56722 # 1 # ID=2_57;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.297 3_18 - 379 AAA_31 PF13614.1 157 4e-27 90.1 0.2 1 1 8.1e-29 7.5e-27 89.2 0.2 1 157 116 269 116 269 0.97 # 13824 # 14960 # -1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.288 1_39 - 273 AAA_31 PF13614.1 157 4.1e-21 70.6 0.1 1 1 6.7e-23 6.3e-21 70.0 0.1 1 152 6 171 6 174 0.91 # 46563 # 47381 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.370 3_20 - 430 AAA_31 PF13614.1 157 3e-11 38.6 0.1 1 1 3.6e-12 3.4e-10 35.2 0.0 2 154 150 299 149 301 0.88 # 15747 # 17036 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.317 1_31 - 509 AAA_31 PF13614.1 157 7.7e-06 21.0 0.1 1 1 1.9e-07 1.7e-05 19.8 0.1 1 152 235 390 235 395 0.79 # 38172 # 39698 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.345 2_25 - 251 NTPase_1 PF03266.10 168 0.0022 12.8 0.2 1 2 0.0054 1.2 3.8 0.1 3 28 105 130 103 150 0.71 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_25 - 251 NTPase_1 PF03266.10 168 0.0022 12.8 0.2 2 2 0.00041 0.095 7.5 0.0 82 107 150 174 125 213 0.66 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_48 - 633 NTPase_1 PF03266.10 168 0.0027 12.5 0.2 1 1 3.1e-05 0.0071 11.1 0.2 2 21 247 266 246 275 0.85 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 1_71 - 294 AAA_33 PF13671.1 143 3.6e-05 18.7 0.0 1 2 0.00019 0.043 8.7 0.0 4 20 34 50 31 80 0.87 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 1_71 - 294 AAA_33 PF13671.1 143 3.6e-05 18.7 0.0 2 2 0.0004 0.093 7.7 0.0 59 106 143 190 101 192 0.88 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 2_25 - 251 AAA_33 PF13671.1 143 0.0017 13.3 0.1 1 1 1.9e-05 0.0043 12.0 0.1 2 38 104 145 104 167 0.68 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 6_3 - 364 Methyltransf_26 PF13659.1 117 6.7e-14 47.0 0.0 1 1 6.3e-16 1.5e-13 45.9 0.0 4 116 36 144 34 145 0.88 # 2053 # 3144 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.377 18_3 - 226 Methyltransf_26 PF13659.1 117 2e-13 45.5 0.0 1 1 1.3e-15 3.1e-13 44.9 0.0 4 116 36 144 34 145 0.86 # 852 # 1529 # 1 # ID=18_3;partial=01;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.370 5_25 - 90 2-Hacid_dh_C PF02826.14 178 0.0022 12.2 0.1 1 2 8.7e-06 0.004 11.4 0.0 38 97 3 53 1 60 0.84 # 24177 # 24446 # 1 # ID=5_25;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.356 5_25 - 90 2-Hacid_dh_C PF02826.14 178 0.0022 12.2 0.1 2 2 0.044 20 -0.7 0.0 141 165 53 77 52 82 0.75 # 24177 # 24446 # 1 # ID=5_25;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.356 1_71 - 294 AAA_30 PF13604.1 196 0.0006 14.5 0.0 1 1 5.5e-06 0.0025 12.4 0.0 5 49 15 60 13 71 0.84 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 2_43 - 649 FtsK_SpoIIIE PF01580.13 205 3.4e-05 18.5 0.0 1 1 5.5e-07 6.3e-05 17.6 0.0 11 53 114 165 106 197 0.69 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 1_40 - 478 FtsK_SpoIIIE PF01580.13 205 7.8e-05 17.3 0.0 1 1 1.4e-06 0.00016 16.2 0.0 33 58 230 255 207 260 0.76 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 3_17 - 482 FtsK_SpoIIIE PF01580.13 205 0.00014 16.4 0.0 1 1 3.2e-06 0.00037 15.1 0.0 27 61 228 270 214 275 0.73 # 12356 # 13801 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.326 2_58 - 492 FtsK_SpoIIIE PF01580.13 205 0.0016 13.0 0.0 1 1 2.7e-05 0.0032 12.0 0.0 17 58 219 260 207 265 0.83 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 18_3 - 226 MTS PF05175.9 170 4.1e-09 31.1 0.0 1 1 2.3e-11 5.4e-09 30.7 0.0 19 140 19 143 7 167 0.77 # 852 # 1529 # 1 # ID=18_3;partial=01;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.370 6_3 - 364 MTS PF05175.9 170 8e-08 26.9 0.0 1 1 8e-10 1.9e-07 25.7 0.0 23 140 22 143 8 165 0.79 # 2053 # 3144 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.377 9_3 - 511 DUF2813 PF11398.3 373 5.8e-08 27.2 0.8 1 2 2.1e-05 0.0099 10.0 0.4 1 113 1 131 1 225 0.68 # 1751 # 3283 # -1 # ID=9_3;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.297 9_3 - 511 DUF2813 PF11398.3 373 5.8e-08 27.2 0.8 2 2 4.9e-07 0.00023 15.4 0.0 285 355 364 438 350 443 0.86 # 1751 # 3283 # -1 # ID=9_3;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.297 3_83 - 97 AAA_35 PF14516.1 331 0.00075 13.2 0.6 1 1 1.7e-06 0.0008 13.1 0.6 208 291 2 85 1 93 0.86 # 62548 # 62838 # -1 # ID=3_83;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.306 2_75 - 62 Trigger_N PF05697.8 145 3.9e-05 18.5 0.4 1 1 9.3e-08 4.3e-05 18.4 0.4 22 73 3 54 1 59 0.90 # 66775 # 66960 # 1 # ID=2_75;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.296 1_71 - 294 ABC_tran PF00005.22 137 2.1e-30 100.9 0.0 1 1 5.5e-32 3.2e-30 100.3 0.0 3 136 22 162 20 163 0.94 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 5_40 - 69 ABC_tran PF00005.22 137 4.8e-12 41.4 0.3 1 1 1e-13 5.8e-12 41.2 0.3 2 42 21 61 20 67 0.93 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 5_41 - 154 ABC_tran PF00005.22 137 8.4e-11 37.4 0.0 1 1 3.4e-12 2e-10 36.2 0.0 88 137 34 83 6 83 0.85 # 37429 # 37890 # -1 # ID=5_41;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.374 9_3 - 511 ABC_tran PF00005.22 137 0.00036 15.9 0.1 1 1 4.4e-05 0.0026 13.2 0.0 12 103 34 134 26 154 0.75 # 1751 # 3283 # -1 # ID=9_3;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.297 2_58 - 492 ABC_tran PF00005.22 137 0.0013 14.1 0.0 1 1 0.0001 0.0059 12.0 0.0 9 33 238 262 231 299 0.89 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_48 - 633 ABC_tran PF00005.22 137 0.0015 13.9 0.0 1 1 0.0003 0.017 10.5 0.0 12 42 245 275 240 339 0.76 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_25 - 251 ABC_tran PF00005.22 137 0.0017 13.8 0.1 1 1 9.5e-05 0.0055 12.1 0.0 8 31 98 121 90 161 0.84 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 5_17 - 703 ABC_tran PF00005.22 137 0.0066 11.8 0.8 1 1 0.00077 0.045 9.1 0.0 13 30 284 301 280 330 0.84 # 12159 # 14267 # 1 # ID=5_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.370 5_40 - 69 ATP-synt_ab PF00006.20 215 0.0011 13.6 0.2 1 1 2.8e-06 0.0013 13.3 0.2 5 36 20 51 17 61 0.89 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 7_18 - 216 DNA_mis_repair PF01119.14 119 0.002 12.6 0.0 1 2 3.6e-05 0.017 9.7 0.0 83 101 76 94 51 106 0.81 # 10948 # 11595 # -1 # ID=7_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 7_18 - 216 DNA_mis_repair PF01119.14 119 0.002 12.6 0.0 2 2 0.025 12 0.5 0.0 10 38 178 211 170 215 0.72 # 10948 # 11595 # -1 # ID=7_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 18_3 - 226 Cons_hypoth95 PF03602.10 183 0.00039 14.9 0.1 1 1 3.6e-06 0.00084 13.8 0.1 92 147 78 130 20 140 0.71 # 852 # 1529 # 1 # ID=18_3;partial=01;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.370 6_3 - 364 Cons_hypoth95 PF03602.10 183 0.0032 11.9 0.0 1 1 3e-05 0.0069 10.8 0.0 94 143 80 126 62 136 0.68 # 2053 # 3144 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.377 2_25 - 251 RuvB_N PF05496.7 234 0.0013 12.9 0.1 1 2 1.7e-05 0.0077 10.3 0.1 48 86 99 135 77 193 0.67 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_25 - 251 RuvB_N PF05496.7 234 0.0013 12.9 0.1 2 2 0.025 12 -0.1 0.0 214 231 214 231 184 233 0.72 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_58 - 492 AAA_19 PF13245.1 76 0.00012 16.9 0.0 1 1 1.5e-06 0.00023 16.0 0.0 6 48 236 273 231 282 0.75 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 1_40 - 478 AAA_19 PF13245.1 76 0.0014 13.4 0.0 1 1 3.5e-05 0.0054 11.6 0.0 6 49 231 272 227 277 0.77 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_48 - 633 AAA_19 PF13245.1 76 0.0049 11.7 0.0 1 1 7.5e-05 0.012 10.5 0.0 9 34 244 267 238 291 0.71 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_48 - 633 AAA_10 PF12846.2 304 1.3e-52 174.2 0.0 1 1 4.1e-54 1.9e-52 173.6 0.0 1 303 244 589 244 590 0.88 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 5_17 - 703 AAA_10 PF12846.2 304 1.1e-49 164.6 0.4 1 1 3.4e-51 1.6e-49 164.0 0.0 1 302 282 641 282 643 0.90 # 12159 # 14267 # 1 # ID=5_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.370 3_41 - 628 AAA_10 PF12846.2 304 3.5e-46 153.0 0.2 1 1 1.2e-47 5.3e-46 152.4 0.2 1 299 251 567 251 570 0.90 # 36899 # 38782 # 1 # ID=3_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.311 3_26 - 754 AAA_10 PF12846.2 304 1.6e-10 35.9 0.5 1 1 3.4e-12 1.6e-10 35.9 0.5 1 300 155 483 155 487 0.68 # 22322 # 24583 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_43 - 649 AAA_10 PF12846.2 304 2.5e-10 35.3 0.0 1 1 9e-12 4.2e-10 34.6 0.0 3 300 152 505 150 508 0.74 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 1_23 - 504 AAA_10 PF12846.2 304 0.00017 16.1 0.0 1 1 5.2e-06 0.00024 15.6 0.0 3 161 220 403 218 472 0.70 # 27078 # 28589 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.336 2_58 - 492 AAA_10 PF12846.2 304 0.00038 15.0 0.0 1 2 0.043 2 2.8 0.0 76 138 52 109 22 148 0.77 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_58 - 492 AAA_10 PF12846.2 304 0.00038 15.0 0.0 2 2 0.00028 0.013 10.0 0.0 4 38 243 277 241 378 0.84 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 1_21 - 667 AAA_10 PF12846.2 304 0.00055 14.5 0.0 1 1 0.00018 0.0082 10.6 0.0 219 267 35 78 8 100 0.76 # 22541 # 24541 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.350 5_40 - 69 AAA_10 PF12846.2 304 0.0011 13.5 0.3 1 1 2.8e-05 0.0013 13.2 0.3 6 25 35 55 31 63 0.80 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 2_25 - 251 AAA_10 PF12846.2 304 0.002 12.6 0.5 1 1 0.00031 0.014 9.8 0.1 3 29 103 129 101 170 0.83 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 6_1 - 579 ResIII PF04851.10 184 1.3e-05 20.2 0.4 1 2 0.01 0.78 4.6 0.0 4 70 262 332 259 409 0.71 # 2 # 1738 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.353 6_1 - 579 ResIII PF04851.10 184 1.3e-05 20.2 0.4 2 2 2.2e-05 0.0017 13.2 0.1 137 164 511 556 419 578 0.66 # 2 # 1738 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.353 15_3 - 595 ResIII PF04851.10 184 8.5e-05 17.5 3.0 1 2 0.012 0.9 4.4 0.0 4 70 278 348 275 421 0.72 # 807 # 2591 # 1 # ID=15_3;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 15_3 - 595 ResIII PF04851.10 184 8.5e-05 17.5 3.0 2 2 4e-05 0.0031 12.4 0.0 137 164 527 572 451 594 0.67 # 807 # 2591 # 1 # ID=15_3;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 1_40 - 478 ResIII PF04851.10 184 0.0002 16.3 0.0 1 1 6.4e-06 0.0005 15.0 0.0 13 64 222 279 202 308 0.78 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_25 - 251 ResIII PF04851.10 184 0.0006 14.7 0.1 1 2 0.00033 0.026 9.4 0.0 22 45 90 121 69 135 0.70 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_25 - 251 ResIII PF04851.10 184 0.0006 14.7 0.1 2 2 0.018 1.4 3.7 0.1 109 154 127 170 123 177 0.75 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_58 - 492 ResIII PF04851.10 184 0.00081 14.3 0.0 1 1 1.1e-05 0.00081 14.3 0.0 22 62 226 279 202 290 0.78 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_43 - 649 ResIII PF04851.10 184 0.00092 14.1 0.0 1 1 2.4e-05 0.0019 13.1 0.0 22 83 138 209 105 284 0.68 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 18_3 - 226 Methyltransf_31 PF13847.1 152 4.9e-06 21.3 0.0 1 1 3e-08 7.1e-06 20.8 0.0 7 110 36 143 30 181 0.73 # 852 # 1529 # 1 # ID=18_3;partial=01;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.370 6_3 - 364 Methyltransf_31 PF13847.1 152 3.2e-05 18.6 0.0 1 1 2.5e-07 5.7e-05 17.8 0.0 7 109 36 142 30 180 0.75 # 2053 # 3144 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.377 5_40 - 69 DUF3584 PF12128.3 1201 0.0034 9.8 0.3 1 1 8.3e-06 0.0038 9.6 0.3 22 37 35 50 27 51 0.89 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 2_25 - 251 Viral_helicase1 PF01443.13 234 0.001 13.7 0.0 1 1 3.4e-06 0.0016 13.1 0.0 2 75 105 175 104 186 0.83 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_6 - 1051 DEAD PF00270.24 169 8.4e-18 59.5 0.0 1 1 1.9e-19 1.7e-17 58.5 0.0 13 163 258 409 245 414 0.86 # 6080 # 9232 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 2_43 - 649 DEAD PF00270.24 169 0.00018 16.1 0.0 1 1 4.4e-06 0.00041 14.9 0.0 10 67 146 202 138 254 0.85 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 1_23 - 504 DEAD PF00270.24 169 0.00027 15.5 0.1 1 1 6.8e-06 0.00063 14.3 0.0 18 69 222 298 204 349 0.75 # 27078 # 28589 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.336 2_58 - 492 DEAD PF00270.24 169 0.0017 12.9 0.1 1 2 0.097 9 0.8 0.1 48 84 39 76 21 92 0.68 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_58 - 492 DEAD PF00270.24 169 0.0017 12.9 0.1 2 2 0.00025 0.023 9.3 0.0 9 32 234 258 223 281 0.77 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 1_40 - 478 DEAD PF00270.24 169 0.0028 12.2 0.0 1 1 9.9e-05 0.0092 10.5 0.0 13 56 234 277 222 282 0.78 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 1_40 - 478 DUF815 PF05673.8 250 0.0025 11.8 0.4 1 2 0.091 42 -2.0 0.1 131 168 37 75 26 91 0.69 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 1_40 - 478 DUF815 PF05673.8 250 0.0025 11.8 0.4 2 2 1.4e-05 0.0063 10.5 0.0 51 77 233 259 202 274 0.77 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_43 - 649 DUF853 PF05872.7 504 0.0038 10.6 0.0 1 1 1.3e-05 0.0059 10.0 0.0 19 65 148 195 134 205 0.83 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 3_26 - 754 TrwB_AAD_bind PF10412.4 386 6.1e-40 132.0 0.0 1 1 1.6e-41 1.1e-39 131.2 0.0 12 380 152 544 143 547 0.85 # 22322 # 24583 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_43 - 649 TrwB_AAD_bind PF10412.4 386 1.1e-33 111.5 0.1 1 2 9.4e-14 6.2e-12 39.8 0.1 13 136 148 289 141 303 0.75 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 2_43 - 649 TrwB_AAD_bind PF10412.4 386 1.1e-33 111.5 0.1 2 2 9.2e-23 6.1e-21 69.5 0.0 222 377 400 557 319 564 0.81 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 1_21 - 667 TrwB_AAD_bind PF10412.4 386 4.9e-09 30.3 0.1 1 1 2.3e-10 1.6e-08 28.6 0.0 222 383 15 178 3 180 0.77 # 22541 # 24541 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.350 2_48 - 633 TrwB_AAD_bind PF10412.4 386 1.6e-07 25.3 0.0 1 2 2.9e-07 1.9e-05 18.5 0.0 12 54 241 283 235 296 0.90 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_48 - 633 TrwB_AAD_bind PF10412.4 386 1.6e-07 25.3 0.0 2 2 0.0067 0.44 4.1 0.0 106 171 551 616 540 622 0.84 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 3_41 - 628 TrwB_AAD_bind PF10412.4 386 3.7e-05 17.5 0.6 1 1 1.9e-06 0.00012 15.8 0.0 14 61 250 297 236 318 0.79 # 36899 # 38782 # 1 # ID=3_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.311 1_40 - 478 TrwB_AAD_bind PF10412.4 386 7.4e-05 16.5 0.2 1 1 6.7e-06 0.00044 14.0 0.0 14 50 234 272 225 295 0.79 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_58 - 492 TrwB_AAD_bind PF10412.4 386 0.00025 14.8 0.1 1 1 9.3e-06 0.00061 13.5 0.0 15 56 240 281 231 292 0.79 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_58 - 492 AAA_11 PF13086.1 236 0.0015 13.2 0.0 1 2 0.018 8.4 0.9 0.0 4 41 49 87 46 148 0.83 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_58 - 492 AAA_11 PF13086.1 236 0.0015 13.2 0.0 2 2 2.9e-05 0.013 10.1 0.0 8 96 231 388 220 487 0.70 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 1_40 - 478 Sigma54_activ_2 PF14532.1 138 1.1e-05 20.6 0.0 1 1 1.4e-07 3.2e-05 19.1 0.0 2 44 216 258 215 277 0.89 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 2_58 - 492 Sigma54_activ_2 PF14532.1 138 0.0014 13.7 0.0 1 1 2.8e-05 0.0066 11.6 0.0 10 43 229 262 222 328 0.73 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 1_71 - 294 AAA_PrkA PF08298.6 358 0.0045 10.7 0.0 1 1 1.5e-05 0.0068 10.1 0.0 87 111 28 52 20 74 0.86 # 73863 # 74744 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 3_26 - 754 T4SS-DNA_transf PF02534.9 469 1.7e-83 275.8 6.6 1 1 1.5e-85 1.7e-83 275.8 6.6 44 449 155 554 117 602 0.85 # 22322 # 24583 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_43 - 649 T4SS-DNA_transf PF02534.9 469 6.7e-64 211.2 0.1 1 1 8.2e-66 9.5e-64 210.7 0.1 11 436 119 557 106 563 0.81 # 40025 # 41971 # 1 # ID=2_43;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.356 2_84 - 234 T4SS-DNA_transf PF02534.9 469 5.5e-12 40.0 0.0 1 2 5.2e-06 0.00061 13.5 0.0 60 105 18 65 3 75 0.82 # 74589 # 75290 # 1 # ID=2_84;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.276 2_84 - 234 T4SS-DNA_transf PF02534.9 469 5.5e-12 40.0 0.0 2 2 2.4e-09 2.8e-07 24.5 0.1 408 451 189 232 181 233 0.93 # 74589 # 75290 # 1 # ID=2_84;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.276 1_23 - 504 T4SS-DNA_transf PF02534.9 469 0.00051 13.7 0.1 1 2 0.00068 0.079 6.5 0.0 41 65 213 239 171 248 0.67 # 27078 # 28589 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.336 1_23 - 504 T4SS-DNA_transf PF02534.9 469 0.00051 13.7 0.1 2 2 0.0017 0.19 5.2 0.1 72 195 275 387 271 425 0.64 # 27078 # 28589 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.336 2_48 - 633 ArgK PF03308.11 267 9.8e-05 16.3 0.1 1 2 0.091 42 -2.2 0.0 183 239 108 166 100 175 0.64 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_48 - 633 ArgK PF03308.11 267 9.8e-05 16.3 0.1 2 2 7.2e-07 0.00033 14.5 0.0 31 69 246 282 238 289 0.83 # 44267 # 46165 # 1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_58 - 492 Pox_A32 PF04665.7 241 0.00031 15.1 0.0 1 1 1.3e-06 0.00061 14.2 0.0 12 63 239 288 232 317 0.77 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 3_17 - 482 GTP_EFTU PF00009.22 188 0.0002 15.9 2.5 1 1 4.4e-07 0.0002 15.9 0.0 3 26 247 270 245 289 0.88 # 12356 # 13801 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.326 2_25 - 251 RNA_helicase PF00910.17 107 1.2e-05 20.5 0.0 1 1 1.2e-07 2.8e-05 19.4 0.0 1 79 104 190 104 209 0.85 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_40 - 478 RNA_helicase PF00910.17 107 0.00025 16.3 0.0 1 1 3.3e-06 0.00076 14.7 0.0 1 31 238 265 238 287 0.77 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 5_40 - 69 UPF0079 PF02367.12 123 0.00036 15.2 0.3 1 1 8.7e-07 0.0004 15.1 0.3 10 36 25 51 9 59 0.84 # 37147 # 37353 # -1 # ID=5_40;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464 1_18 - 328 S1 PF00575.18 74 4.2e-05 18.7 6.3 1 3 0.022 10 1.4 0.0 20 47 82 120 77 138 0.71 # 19119 # 20102 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.374 1_18 - 328 S1 PF00575.18 74 4.2e-05 18.7 6.3 2 3 1.2e-06 0.00056 15.1 1.2 5 68 156 218 152 221 0.90 # 19119 # 20102 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.374 1_18 - 328 S1 PF00575.18 74 4.2e-05 18.7 6.3 3 3 0.0085 3.9 2.8 0.3 6 27 244 266 241 269 0.85 # 19119 # 20102 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.374 2_25 - 251 AAA_24 PF13479.1 213 0.0033 12.1 0.2 1 1 2.4e-05 0.011 10.4 0.2 5 23 103 121 99 175 0.81 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_58 - 492 UvrD-helicase PF00580.16 315 1.7e-05 19.3 0.5 1 2 0.0021 0.96 3.7 0.5 158 262 28 138 3 140 0.61 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_58 - 492 UvrD-helicase PF00580.16 315 1.7e-05 19.3 0.5 2 2 3.2e-06 0.0015 12.9 0.0 6 36 233 263 229 272 0.86 # 56710 # 58185 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.325 2_25 - 251 NACHT PF05729.7 166 0.00071 14.3 0.4 1 1 5.7e-06 0.0026 12.5 0.4 3 42 104 137 102 204 0.84 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 2_25 - 251 AAA_25 PF13481.1 194 1e-06 23.3 0.0 1 1 1.8e-08 4.2e-06 21.3 0.0 22 64 90 132 69 223 0.83 # 22232 # 22984 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_40 - 478 AAA_25 PF13481.1 194 0.0006 14.3 0.0 1 1 5.6e-06 0.0013 13.2 0.0 35 77 237 279 202 281 0.77 # 47398 # 48831 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.368 26_1 - 205 SNF2_N PF00176.18 299 0.0023 11.8 0.1 1 1 2e-05 0.0095 9.8 0.1 137 269 4 170 2 188 0.59 # 1 # 615 # 1 # ID=26_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.384 1_39 - 273 APS_kinase PF01583.15 157 0.00035 15.3 0.0 1 1 1.3e-06 0.00062 14.5 0.0 10 57 14 61 6 72 0.88 # 46563 # 47381 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.370 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/afc6e168-11e4-496a-883b-3c642fae8de8 # Target file: checkm_output/bins/pGCA_000940785.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000940785.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/afc6e168-11e4-496a-883b-3c642fae8de8 checkm_output/bins/pGCA_000940785.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:43:11 2020 # [ok]