# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_54 - 92 ATP_bind_3 PF01171.15 182 0.0016 12.4 0.0 1 1 5.5e-06 0.0017 12.4 0.0 3 27 23 47 21 87 0.84 # 49309 # 49584 # -1 # ID=3_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.355 3_38 - 364 UPF0020 PF01170.13 180 0.0001 16.4 0.1 1 1 1.8e-06 0.00054 14.0 0.1 31 152 35 146 20 162 0.77 # 31077 # 32168 # -1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.376 2_9 - 653 Seryl_tRNA_N PF02403.17 108 0.021 9.4 97.1 1 7 0.00011 0.035 8.7 10.6 41 100 225 287 218 294 0.70 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_9 - 653 Seryl_tRNA_N PF02403.17 108 0.021 9.4 97.1 2 7 0.0019 0.57 4.7 14.1 18 99 360 443 354 448 0.68 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_9 - 653 Seryl_tRNA_N PF02403.17 108 0.021 9.4 97.1 3 7 0.0017 0.53 4.8 17.3 26 99 401 474 376 478 0.56 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_9 - 653 Seryl_tRNA_N PF02403.17 108 0.021 9.4 97.1 4 7 4.3e-05 0.013 10.0 11.1 37 103 477 544 475 546 0.95 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_9 - 653 Seryl_tRNA_N PF02403.17 108 0.021 9.4 97.1 5 7 4.8e-05 0.014 9.9 14.9 11 104 496 590 494 600 0.84 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_9 - 653 Seryl_tRNA_N PF02403.17 108 0.021 9.4 97.1 6 7 0.0065 2 3.0 10.3 33 99 557 625 548 632 0.62 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_9 - 653 Seryl_tRNA_N PF02403.17 108 0.021 9.4 97.1 7 7 0.0059 1.8 3.1 2.6 43 84 600 642 596 646 0.72 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_46 - 273 FeoB_N PF02421.13 156 0.0022 11.7 1.0 1 2 0.0084 2.6 1.8 0.0 6 24 12 30 7 37 0.73 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 2_46 - 273 FeoB_N PF02421.13 156 0.0022 11.7 1.0 2 2 8.4e-05 0.025 8.3 0.3 77 123 158 209 129 221 0.80 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 1_82 - 289 MipZ PF09140.6 261 2.4e-14 47.5 0.1 1 2 2.7e-11 4e-09 30.3 0.1 3 56 9 62 7 86 0.90 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 1_82 - 289 MipZ PF09140.6 261 2.4e-14 47.5 0.1 2 2 1.2e-06 0.00018 15.1 0.0 76 125 120 169 88 179 0.82 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 2_46 - 273 MipZ PF09140.6 261 0.0006 13.4 0.0 1 2 2.4e-05 0.0036 10.8 0.0 11 134 16 134 6 142 0.65 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 2_46 - 273 MipZ PF09140.6 261 0.0006 13.4 0.0 2 2 0.0063 0.96 2.9 0.0 41 129 82 168 62 170 0.62 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 1_82 - 289 YhjQ PF06564.7 244 1.3e-07 25.7 0.0 1 1 3.2e-09 9.8e-07 22.8 0.0 10 149 15 174 8 180 0.72 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 2_5 - 39 3HCDH_N PF02737.13 180 1.7e-05 19.0 0.1 1 1 5.8e-08 1.8e-05 18.9 0.1 1 37 2 38 2 38 0.95 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 2_45 - 478 AAA_2 PF07724.9 171 0.0012 13.2 1.4 1 2 0.024 7.2 0.9 0.0 4 45 184 225 183 234 0.85 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 2_45 - 478 AAA_2 PF07724.9 171 0.0012 13.2 1.4 2 2 3.4e-05 0.01 10.2 0.0 2 42 234 276 233 282 0.84 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 2_24 - 700 DUF87 PF01935.12 229 6.3e-08 27.1 2.7 1 1 2.6e-09 2.6e-07 25.1 0.0 26 102 282 352 280 543 0.63 # 25196 # 27295 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.367 2_45 - 478 DUF87 PF01935.12 229 9.1e-05 16.8 0.5 1 1 2.6e-06 0.00026 15.3 0.1 25 57 237 270 213 274 0.75 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_9 - 645 DUF87 PF01935.12 229 0.001 13.3 2.0 1 2 0.00034 0.034 8.4 0.1 28 68 252 291 251 320 0.78 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_9 - 645 DUF87 PF01935.12 229 0.001 13.3 2.0 2 2 0.021 2.1 2.5 0.0 143 220 400 470 338 478 0.84 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_33 - 509 NB-ARC PF00931.17 287 0.00012 15.4 3.0 1 2 4.6e-06 0.0014 11.9 0.4 24 76 48 98 38 233 0.85 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_33 - 509 NB-ARC PF00931.17 287 0.00012 15.4 3.0 2 2 0.0031 0.93 2.7 0.1 52 96 295 338 281 352 0.79 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 3_10 - 489 AAA_22 PF13401.1 131 8.6e-06 20.4 0.2 1 1 1.2e-05 0.00075 14.1 0.1 4 124 203 305 199 312 0.62 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_33 - 509 AAA_22 PF13401.1 131 1.1e-05 20.0 4.4 1 1 6e-05 0.0037 11.9 2.7 8 60 47 94 41 277 0.83 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_45 - 478 AAA_22 PF13401.1 131 2e-05 19.2 0.0 1 1 9.2e-07 5.6e-05 17.8 0.0 3 69 234 325 231 382 0.85 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_99 - 444 AAA_22 PF13401.1 131 0.00021 15.9 0.0 1 1 9.5e-06 0.00058 14.5 0.0 2 28 210 236 209 319 0.75 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_9 - 645 AAA_22 PF13401.1 131 0.0019 12.9 0.4 1 1 0.00015 0.0094 10.6 0.1 6 28 249 271 244 297 0.86 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_82 - 289 ATP_bind_1 PF03029.12 238 2.2e-06 21.8 0.6 1 1 5.8e-08 8.8e-06 19.8 0.6 6 163 17 207 15 251 0.79 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 2_56 - 379 ATP_bind_1 PF03029.12 238 0.0016 12.5 0.2 1 1 2e-05 0.003 11.6 0.2 157 237 155 233 129 234 0.83 # 53554 # 54690 # -1 # ID=2_56;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.321 1_33 - 509 Trp_halogenase PF04820.9 454 0.00079 12.5 0.0 1 1 4.1e-06 0.0012 11.9 0.0 88 165 277 355 273 370 0.91 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 3_10 - 489 AAA_3 PF07726.6 131 0.0014 12.7 0.0 1 1 1e-05 0.003 11.6 0.0 3 91 207 298 205 306 0.78 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 3_10 - 489 AAA_17 PF13207.1 121 4.2e-05 18.9 0.4 1 1 1.3e-05 0.00064 15.0 0.0 3 40 207 255 206 279 0.72 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_82 - 289 AAA_17 PF13207.1 121 5.8e-05 18.4 0.0 1 1 2.1e-05 0.0011 14.3 0.0 9 60 17 75 16 198 0.72 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 2_45 - 478 AAA_17 PF13207.1 121 6.6e-05 18.2 0.3 1 1 5e-06 0.00025 16.3 0.0 2 23 238 259 237 409 0.75 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_99 - 444 AAA_17 PF13207.1 121 0.00011 17.6 1.4 1 2 0.044 2.2 3.6 0.8 70 100 35 83 6 185 0.64 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_99 - 444 AAA_17 PF13207.1 121 0.00011 17.6 1.4 2 2 0.00018 0.0089 11.3 0.0 2 34 215 244 214 346 0.66 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_9 - 645 AAA_17 PF13207.1 121 0.00052 15.3 0.3 1 1 4.2e-05 0.0021 13.4 0.0 3 23 251 271 251 335 0.81 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_33 - 509 AAA_17 PF13207.1 121 0.0023 13.2 4.5 1 1 5.4e-05 0.0027 13.0 0.2 2 96 46 153 45 174 0.51 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_37 - 198 Adenylsucc_synt PF00709.16 421 0.084 5.9 6.2 1 2 0.00072 0.22 4.5 0.1 285 358 28 99 19 125 0.72 # 33505 # 34098 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.407 1_37 - 198 Adenylsucc_synt PF00709.16 421 0.084 5.9 6.2 2 2 0.0017 0.51 3.3 2.6 154 204 125 175 109 196 0.59 # 33505 # 34098 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.407 1_9 - 645 Miro PF08477.8 119 0.00041 15.3 0.0 1 1 1e-05 0.0016 13.5 0.0 3 62 251 309 250 322 0.76 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_33 - 509 Miro PF08477.8 119 0.00066 14.7 0.1 1 1 2e-05 0.0031 12.5 0.0 1 74 45 108 45 117 0.72 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_46 - 273 MobB PF03205.9 140 0.00038 14.6 0.0 1 1 6.1e-06 0.00092 13.4 0.0 8 38 14 44 7 106 0.86 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 1_82 - 289 MobB PF03205.9 140 0.002 12.3 0.1 1 1 3.1e-05 0.0046 11.1 0.1 9 46 16 51 8 64 0.88 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 5_9 - 465 AAA_4 PF04326.9 122 7.2e-20 65.9 1.1 1 1 5.1e-22 1.5e-19 64.8 1.1 1 122 306 444 306 444 0.94 # 5320 # 6714 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.298 1_82 - 289 ArsA_ATPase PF02374.10 305 5.7e-08 26.6 0.2 1 1 2.4e-09 3.6e-07 23.9 0.2 8 137 14 153 7 156 0.63 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 2_46 - 273 ArsA_ATPase PF02374.10 305 0.0007 13.1 0.3 1 1 9.7e-06 0.0015 12.1 0.1 12 38 17 43 9 147 0.76 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 3_10 - 489 PhoH PF02562.11 205 2.3e-07 24.7 0.5 1 2 1e-05 0.0031 11.2 0.0 5 40 187 224 183 238 0.79 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 3_10 - 489 PhoH PF02562.11 205 2.3e-07 24.7 0.5 2 2 9.2e-06 0.0028 11.4 0.1 117 170 267 322 242 342 0.74 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 2_45 - 478 MCM PF00493.18 331 6.8e-05 16.2 0.0 1 1 5.2e-07 0.00016 15.0 0.0 53 84 231 262 221 268 0.90 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 2_45 - 478 T2SE PF00437.15 272 2.7e-46 152.1 0.0 1 1 6.3e-48 4.7e-46 151.3 0.0 5 270 111 391 108 393 0.91 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_99 - 444 T2SE PF00437.15 272 4e-37 122.0 0.0 1 1 8e-39 6.1e-37 121.4 0.0 10 264 95 352 86 360 0.87 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 3_10 - 489 T2SE PF00437.15 272 0.00056 13.3 0.0 1 1 1.4e-05 0.0011 12.4 0.0 107 162 185 236 170 279 0.72 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_33 - 509 T2SE PF00437.15 272 0.001 12.5 0.0 1 1 2.4e-05 0.0018 11.6 0.0 121 156 41 71 19 86 0.82 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_54 - 493 AAA_26 PF13500.1 199 0.0015 12.6 0.0 1 1 1.6e-05 0.0047 11.0 0.0 1 34 219 252 219 336 0.86 # 50392 # 51870 # -1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_33 - 509 Zeta_toxin PF06414.7 201 2.8e-05 17.8 0.0 1 1 7e-07 0.00011 15.9 0.0 7 48 34 77 28 90 0.81 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_9 - 645 Zeta_toxin PF06414.7 201 0.0022 11.6 1.6 1 2 0.016 2.4 1.6 0.3 98 133 142 178 95 185 0.83 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_9 - 645 Zeta_toxin PF06414.7 201 0.0022 11.6 1.6 2 2 0.00016 0.024 8.2 0.0 20 56 251 287 242 300 0.84 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 2_5 - 39 NAD_binding_8 PF13450.1 68 2e-05 19.0 0.1 1 1 7.4e-08 2.2e-05 18.9 0.1 1 27 5 31 5 34 0.94 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 2_5 - 39 FAD_binding_3 PF01494.14 356 2.7e-06 21.1 0.1 1 1 8.8e-09 2.7e-06 21.1 0.1 4 37 3 36 1 38 0.91 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 3_54 - 92 TIGR02432 TIGR02432 189 0.00018 15.6 0.0 1 1 6.6e-07 0.0002 15.5 0.0 3 27 23 47 21 88 0.84 # 49309 # 49584 # -1 # ID=3_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.355 1_82 - 289 Fer4_NifH PF00142.13 273 1e-07 25.8 0.0 1 1 2e-09 3e-07 24.3 0.0 7 49 14 56 9 89 0.86 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 2_46 - 273 Fer4_NifH PF00142.13 273 0.0018 12.0 0.0 1 1 1.7e-05 0.0026 11.4 0.0 2 63 7 70 6 89 0.74 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 1_33 - 509 Arch_ATPase PF01637.13 234 0.0028 11.8 18.1 1 2 3.8e-05 0.012 9.8 9.7 23 160 46 254 35 257 0.76 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_33 - 509 Arch_ATPase PF01637.13 234 0.0028 11.8 18.1 2 2 0.0081 2.5 2.2 0.6 104 141 249 289 245 327 0.78 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_33 - 509 AAA_16 PF13191.1 185 2.8e-05 18.6 0.0 1 1 3.5e-06 0.00035 15.0 0.0 25 165 44 230 39 255 0.64 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_99 - 444 AAA_16 PF13191.1 185 0.00012 16.6 0.0 1 1 3e-06 0.0003 15.3 0.0 22 49 210 237 199 267 0.81 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_82 - 289 AAA_16 PF13191.1 185 0.00028 15.4 0.0 1 1 5.8e-06 0.00059 14.3 0.0 34 84 17 81 15 150 0.66 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 5_9 - 465 AAA_23 PF13476.1 202 0.00013 16.8 8.4 1 1 4.2e-06 0.00042 15.1 8.4 1 76 5 86 5 461 0.79 # 5320 # 6714 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.298 1_99 - 444 AAA_23 PF13476.1 202 0.00036 15.4 0.3 1 1 3.6e-06 0.00036 15.4 0.3 5 37 191 230 188 236 0.89 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_9 - 645 AAA_23 PF13476.1 202 0.0022 12.8 1.6 1 2 0.018 1.8 3.3 0.5 108 165 109 162 17 193 0.49 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_9 - 645 AAA_23 PF13476.1 202 0.0022 12.8 1.6 2 2 0.00077 0.078 7.7 0.0 24 37 252 265 251 370 0.90 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 2_45 - 478 AAA_18 PF13238.1 129 4.4e-05 18.3 0.1 1 1 7.6e-06 0.00033 15.5 0.0 1 36 238 280 238 360 0.67 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_99 - 444 AAA_18 PF13238.1 129 7.6e-05 17.5 2.3 1 1 8.5e-06 0.00037 15.3 0.0 1 68 215 286 215 322 0.64 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_9 - 645 AAA_18 PF13238.1 129 8.8e-05 17.3 2.7 1 1 2.3e-06 0.0001 17.1 0.0 2 40 251 286 251 327 0.73 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 3_10 - 489 AAA_18 PF13238.1 129 0.0011 13.8 1.8 1 1 5.5e-05 0.0024 12.7 0.3 2 67 207 297 207 399 0.74 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_82 - 289 AAA_18 PF13238.1 129 0.0024 12.7 1.2 1 1 0.00028 0.012 10.4 0.2 8 62 17 78 15 159 0.63 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 1_33 - 509 AAA_18 PF13238.1 129 0.0058 11.4 7.7 1 2 0.00077 0.034 9.0 0.0 2 23 47 82 47 153 0.76 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_33 - 509 AAA_18 PF13238.1 129 0.0058 11.4 7.7 2 2 0.018 0.77 4.6 0.7 22 81 273 339 256 361 0.74 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_24 - 700 AAA_18 PF13238.1 129 0.083 7.7 6.5 1 1 0.002 0.086 7.6 2.8 1 68 282 369 282 486 0.78 # 25196 # 27295 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.367 2_9 - 653 AAA_13 PF13166.1 712 8.2e-05 15.6 88.5 1 3 0.012 3.5 0.3 30.4 307 467 219 384 207 388 0.57 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_9 - 653 AAA_13 PF13166.1 712 8.2e-05 15.6 88.5 2 3 1.6e-06 0.00047 13.1 41.5 276 471 330 520 321 530 0.80 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_9 - 653 AAA_13 PF13166.1 712 8.2e-05 15.6 88.5 3 3 3.1e-06 0.00095 12.1 16.8 291 402 529 643 525 646 0.89 # 7907 # 9865 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_82 - 289 CbiA PF01656.18 195 6.4e-34 111.5 0.0 1 1 5.2e-36 7.9e-34 111.2 0.0 1 194 9 246 9 247 0.80 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 2_46 - 273 CbiA PF01656.18 195 1.6e-11 38.4 0.0 1 1 1.6e-13 2.5e-11 37.8 0.0 1 169 8 212 8 227 0.73 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 2_45 - 478 IIGP PF05049.8 376 0.00011 15.5 0.2 1 2 0.005 1.5 1.9 0.2 145 249 24 137 7 143 0.67 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 2_45 - 478 IIGP PF05049.8 376 0.00011 15.5 0.2 2 2 9.2e-06 0.0028 10.9 0.0 22 55 222 255 205 288 0.79 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 3_41 - 235 Ribosomal_S13 PF00416.17 107 0.0012 13.7 1.0 1 1 6.1e-06 0.0019 13.2 0.2 33 89 62 119 25 124 0.72 # 33446 # 34150 # 1 # ID=3_41;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.295 3_38 - 364 Methyltransf_25 PF13649.1 101 2.7e-05 19.0 0.2 1 1 3.2e-07 9.7e-05 17.2 0.0 3 73 38 103 36 134 0.84 # 31077 # 32168 # -1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.376 3_10 - 489 AAA_14 PF13173.1 128 3.8e-07 24.6 3.3 1 1 4.4e-09 6.7e-07 23.7 0.2 4 85 205 295 203 304 0.69 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_9 - 645 AAA_14 PF13173.1 128 2e-05 19.0 0.6 1 2 0.00013 0.019 9.3 0.1 7 86 252 357 249 365 0.68 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_9 - 645 AAA_14 PF13173.1 128 2e-05 19.0 0.6 2 2 0.00095 0.14 6.5 0.1 28 78 451 525 432 562 0.55 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_33 - 509 SRPRB PF09439.5 181 2.3e-05 18.1 0.1 1 1 1.4e-07 4.2e-05 17.3 0.1 4 103 44 138 41 213 0.83 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_5 - 39 Rossmann-like PF10727.4 127 0.0011 13.2 0.1 1 1 3.6e-06 0.0011 13.2 0.1 12 43 2 33 1 38 0.87 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 5_9 - 465 AAA_29 PF13555.1 62 0.00068 13.6 0.0 1 1 4.9e-06 0.0015 12.6 0.0 2 54 4 55 3 62 0.89 # 5320 # 6714 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.298 3_10 - 489 AAA PF00004.24 132 3.9e-05 18.3 0.0 1 1 6.8e-07 0.0001 17.0 0.0 3 74 208 285 206 298 0.69 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_33 - 509 AAA PF00004.24 132 8.5e-05 17.3 7.5 1 2 4.2e-05 0.0064 11.2 0.4 2 31 47 79 46 187 0.72 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_33 - 509 AAA PF00004.24 132 8.5e-05 17.3 7.5 2 2 0.0006 0.091 7.5 1.6 48 116 206 278 185 296 0.69 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_61 - 412 PGK PF00162.14 384 0.00021 14.4 0.1 1 1 1.3e-06 0.0004 13.5 0.1 98 157 170 226 154 237 0.80 # 57917 # 59152 # 1 # ID=2_61;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.344 3_54 - 92 PAPS_reduct PF01507.14 174 1.1e-05 19.8 0.0 1 1 4.4e-08 1.3e-05 19.5 0.0 3 51 23 80 21 89 0.76 # 49309 # 49584 # -1 # ID=3_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.355 2_45 - 478 Sigma54_activat PF00158.21 168 2.2e-05 18.4 0.0 1 1 5.4e-07 5.5e-05 17.2 0.0 4 50 217 263 214 283 0.78 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_99 - 444 Sigma54_activat PF00158.21 168 6.9e-05 16.8 0.0 1 1 1.4e-06 0.00014 15.8 0.0 15 51 205 241 195 258 0.81 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_33 - 509 Sigma54_activat PF00158.21 168 0.00011 16.2 0.0 1 1 2.1e-06 0.00021 15.3 0.0 22 56 43 77 25 87 0.86 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_9 - 645 MMR_HSR1 PF01926.18 116 0.0004 14.8 0.0 1 1 3.2e-05 0.0048 11.3 0.0 4 62 252 308 250 371 0.67 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_82 - 289 MMR_HSR1 PF01926.18 116 0.00049 14.5 0.0 1 1 6.5e-05 0.0098 10.3 0.0 10 58 18 154 15 228 0.61 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 3_38 - 364 N6_Mtase PF02384.11 311 1.7e-06 21.8 0.7 1 1 5.4e-08 1.6e-05 18.5 0.7 26 180 10 140 5 264 0.70 # 31077 # 32168 # -1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.376 2_45 - 478 DUF258 PF03193.11 161 0.00052 13.7 0.0 1 1 1e-05 0.001 12.7 0.0 5 59 204 259 200 329 0.87 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_9 - 645 DUF258 PF03193.11 161 0.0027 11.4 0.2 1 1 9.5e-05 0.0096 9.6 0.0 39 66 251 278 244 353 0.71 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_82 - 289 DUF258 PF03193.11 161 0.0033 11.1 0.0 1 1 6.3e-05 0.0064 10.2 0.0 39 82 11 54 4 68 0.78 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 1_3 - 273 TraG-D_C PF12696.2 128 1.9e-18 61.0 1.9 1 1 2.6e-20 2.7e-18 60.6 1.2 31 125 2 87 1 89 0.82 # 3133 # 3951 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 2_64 - 698 TraG-D_C PF12696.2 128 1e-11 39.3 0.0 1 1 2e-13 2e-11 38.3 0.0 3 100 539 638 538 656 0.80 # 61478 # 63571 # 1 # ID=2_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.349 1_2 - 606 TraG-D_C PF12696.2 128 0.00032 15.1 0.0 1 1 7.6e-06 0.00076 13.8 0.0 1 18 585 602 585 604 0.94 # 1295 # 3112 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 2_5 - 39 NAD_binding_2 PF03446.10 163 0.0011 13.3 0.0 1 1 3.8e-06 0.0011 13.2 0.0 2 39 1 38 1 38 0.95 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 2_46 - 273 AAA_31 PF13614.1 157 1.3e-20 68.4 0.1 1 1 2.1e-22 2.2e-20 67.7 0.1 1 152 6 171 6 174 0.86 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 1_82 - 289 AAA_31 PF13614.1 157 1.1e-10 36.1 1.0 1 2 9.3e-11 9.4e-09 29.8 0.6 3 134 9 159 8 178 0.72 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 1_82 - 289 AAA_31 PF13614.1 157 1.1e-10 36.1 1.0 2 2 0.08 8.1 0.8 0.0 80 121 159 200 153 219 0.84 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 2_54 - 493 AAA_31 PF13614.1 157 4.9e-07 24.3 0.1 1 1 1.1e-08 1.1e-06 23.1 0.1 1 152 219 374 219 379 0.79 # 50392 # 51870 # -1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_9 - 645 NTPase_1 PF03266.10 168 0.00041 14.6 0.2 1 1 4.9e-06 0.0015 12.7 0.1 3 55 251 303 250 330 0.82 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 3_10 - 489 DnaB_C PF03796.10 259 0.00022 14.6 0.3 1 2 0.0011 0.33 4.2 0.0 19 49 203 233 195 238 0.83 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 3_10 - 489 DnaB_C PF03796.10 259 0.00022 14.6 0.3 2 2 6.7e-05 0.02 8.2 0.2 93 156 262 324 234 339 0.75 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 3_38 - 364 Methyltransf_26 PF13659.1 117 2.4e-14 47.9 0.0 1 1 1.6e-16 4.8e-14 46.9 0.0 4 116 36 144 34 145 0.90 # 31077 # 32168 # -1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.376 2_5 - 39 NAD_Gly3P_dh_N PF01210.18 157 0.00069 13.8 0.0 1 1 2.3e-06 0.0007 13.8 0.0 1 36 2 37 2 38 0.94 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 2_18 - 102 2-Hacid_dh_C PF02826.14 178 0.00066 13.3 0.1 1 1 4e-06 0.0012 12.5 0.1 37 97 4 55 1 59 0.84 # 17515 # 17820 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 3_10 - 489 AAA_30 PF13604.1 196 8.1e-08 26.5 0.0 1 1 2.5e-09 7.5e-07 23.3 0.0 2 137 187 313 186 343 0.80 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 2_5 - 39 ApbA PF02558.11 151 3.8e-06 20.9 0.0 1 1 1.3e-08 3.8e-06 20.9 0.0 1 32 3 35 3 38 0.89 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 2_45 - 478 FtsK_SpoIIIE PF01580.13 205 4.6e-05 17.4 0.0 1 1 3.1e-07 9.5e-05 16.4 0.0 32 58 229 255 208 260 0.77 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 3_38 - 364 MTS PF05175.9 170 1.4e-07 25.5 0.0 1 1 8.5e-10 2.6e-07 24.6 0.0 24 140 23 143 8 165 0.74 # 31077 # 32168 # -1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.376 1_33 - 509 ABC_tran PF00005.22 137 0.00063 14.5 0.0 1 1 1.6e-05 0.0017 13.2 0.0 11 61 43 101 37 181 0.74 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_99 - 444 ABC_tran PF00005.22 137 0.0007 14.4 0.0 1 1 1.7e-05 0.0017 13.1 0.0 9 51 210 252 203 348 0.78 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_9 - 645 ABC_tran PF00005.22 137 0.0013 13.5 0.2 1 1 3.7e-05 0.0038 12.0 0.0 16 32 252 268 243 367 0.92 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 3_21 - 215 DNA_mis_repair PF01119.14 119 0.00058 13.8 0.0 1 2 1.6e-05 0.0049 10.8 0.0 62 101 54 93 19 105 0.81 # 13095 # 13739 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.374 3_21 - 215 DNA_mis_repair PF01119.14 119 0.00058 13.8 0.0 2 2 0.023 6.9 0.7 0.0 11 38 178 210 172 214 0.69 # 13095 # 13739 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.374 3_38 - 364 Cons_hypoth95 PF03602.10 183 0.0012 12.8 0.0 1 1 7.9e-06 0.0024 11.7 0.0 99 146 85 129 63 140 0.72 # 31077 # 32168 # -1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.376 2_4 - 277 UDPG_MGDP_dh_N PF03721.9 185 3.4e-43 141.6 0.1 1 1 3.7e-45 5.6e-43 140.9 0.1 40 185 2 146 1 146 0.95 # 2262 # 3092 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.308 2_5 - 39 UDPG_MGDP_dh_N PF03721.9 185 8.2e-17 55.6 1.3 1 1 5.7e-19 8.6e-17 55.5 1.3 1 38 1 38 1 38 0.98 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 2_45 - 478 AAA_19 PF13245.1 76 0.0011 13.2 0.0 1 1 2e-05 0.003 11.8 0.0 5 49 230 272 226 277 0.78 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 3_10 - 489 AAA_19 PF13245.1 76 0.0012 13.1 0.0 1 1 1.7e-05 0.0026 12.0 0.0 10 27 203 220 196 237 0.79 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_9 - 645 AAA_10 PF12846.2 304 1.3e-59 196.5 0.7 1 1 2.8e-61 1.7e-59 196.1 0.1 3 301 249 598 247 602 0.90 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 2_24 - 700 AAA_10 PF12846.2 304 1.6e-49 163.4 0.1 1 1 4.6e-51 2.8e-49 162.6 0.1 1 302 279 638 279 640 0.90 # 25196 # 27295 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.367 2_64 - 698 AAA_10 PF12846.2 304 4e-10 34.0 0.0 1 1 1.3e-11 7.9e-10 33.0 0.0 3 267 220 578 218 600 0.69 # 61478 # 63571 # 1 # ID=2_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.349 1_82 - 289 AAA_10 PF12846.2 304 0.00017 15.6 0.2 1 1 3.3e-06 0.0002 15.3 0.2 11 101 17 127 10 280 0.70 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 1_2 - 606 AAA_10 PF12846.2 304 0.00038 14.4 0.1 1 1 1.5e-05 0.00089 13.2 0.1 3 141 178 339 176 427 0.65 # 1295 # 3112 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 2_5 - 39 DAO PF01266.19 358 8.3e-05 16.0 0.4 1 1 2.8e-07 8.6e-05 16.0 0.4 2 29 3 30 2 34 0.92 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 2_45 - 478 ResIII PF04851.10 184 0.00018 15.8 0.0 1 1 4.6e-06 0.00047 14.5 0.0 22 64 226 279 196 308 0.78 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_99 - 444 ResIII PF04851.10 184 0.00078 13.8 0.1 1 1 2e-05 0.002 12.4 0.1 22 48 196 234 121 250 0.68 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_9 - 645 ResIII PF04851.10 184 0.0019 12.5 0.9 1 1 3.6e-05 0.0037 11.6 0.1 88 170 451 535 423 550 0.66 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 3_38 - 364 Methyltransf_31 PF13847.1 152 9.1e-05 16.5 0.0 1 1 5.3e-07 0.00016 15.8 0.0 7 109 36 142 30 181 0.74 # 31077 # 32168 # -1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.376 1_9 - 645 Zot PF05707.7 193 6.6e-06 20.2 0.8 1 1 2.2e-07 3.3e-05 17.9 0.1 34 129 458 556 444 557 0.66 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 3_10 - 489 Zot PF05707.7 193 0.00044 14.2 0.0 1 1 9.5e-06 0.0014 12.5 0.0 3 97 206 287 204 307 0.82 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 3_10 - 489 Viral_helicase1 PF01443.13 234 7.9e-07 23.2 0.0 1 1 5e-09 1.5e-06 22.3 0.0 1 232 206 469 206 471 0.69 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 3_10 - 489 DUF2075 PF09848.4 352 2.3e-12 41.0 1.6 1 2 4.6e-12 6.9e-10 32.8 0.5 2 207 204 378 203 390 0.76 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 3_10 - 489 DUF2075 PF09848.4 352 2.3e-12 41.0 1.6 2 2 0.00045 0.068 6.5 0.0 279 322 416 458 400 479 0.78 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_33 - 509 DUF2075 PF09848.4 352 0.00019 14.9 0.6 1 1 9.6e-06 0.0015 12.0 0.3 4 75 46 115 43 263 0.79 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_61 - 529 SPOUT_MTase PF02590.12 155 0.0019 12.4 0.5 1 2 3.7e-05 0.011 9.9 0.0 13 87 297 373 288 385 0.83 # 55813 # 57399 # 1 # ID=1_61;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_61 - 529 SPOUT_MTase PF02590.12 155 0.0019 12.4 0.5 2 2 0.078 24 -0.9 0.0 15 44 450 479 445 495 0.72 # 55813 # 57399 # 1 # ID=1_61;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_33 - 509 DEAD PF00270.24 169 0.00012 16.1 0.1 1 1 3e-05 0.0023 11.9 0.1 8 132 37 281 32 300 0.60 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_64 - 698 DEAD PF00270.24 169 0.00018 15.5 0.1 1 1 9.3e-06 0.00071 13.6 0.0 18 69 222 298 204 349 0.76 # 61478 # 63571 # 1 # ID=2_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.349 1_99 - 444 DEAD PF00270.24 169 0.0011 12.9 0.0 1 1 3.3e-05 0.0025 11.8 0.0 10 33 207 231 202 335 0.89 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 2_45 - 478 DEAD PF00270.24 169 0.0015 12.5 0.0 1 1 6.9e-05 0.0052 10.7 0.0 13 56 234 277 222 282 0.79 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 2_5 - 39 Pyr_redox PF00070.22 80 2.4e-05 19.2 0.4 1 1 8.2e-08 2.5e-05 19.1 0.4 2 31 3 32 2 37 0.91 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 2_64 - 698 TrwB_AAD_bind PF10412.4 386 1.8e-09 31.1 0.0 1 2 0.077 4.7 0.1 0.0 9 32 212 235 206 243 0.77 # 61478 # 63571 # 1 # ID=2_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.349 2_64 - 698 TrwB_AAD_bind PF10412.4 386 1.8e-09 31.1 0.0 2 2 4.8e-10 2.9e-08 27.1 0.0 169 337 465 628 449 657 0.77 # 61478 # 63571 # 1 # ID=2_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.349 1_3 - 273 TrwB_AAD_bind PF10412.4 386 2.4e-07 24.1 0.3 1 1 8.9e-09 5.4e-07 23.0 0.3 277 364 5 87 2 102 0.85 # 3133 # 3951 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_2 - 606 TrwB_AAD_bind PF10412.4 386 2.1e-05 17.7 0.0 1 2 4.1e-06 0.00025 14.2 0.0 13 162 174 344 168 355 0.84 # 1295 # 3112 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_2 - 606 TrwB_AAD_bind PF10412.4 386 2.1e-05 17.7 0.0 2 2 0.043 2.6 0.9 0.0 222 260 558 601 538 603 0.61 # 1295 # 3112 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 2_45 - 478 TrwB_AAD_bind PF10412.4 386 5.3e-05 16.4 0.1 1 1 4.3e-06 0.00026 14.1 0.0 14 50 234 272 222 295 0.79 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_99 - 444 TrwB_AAD_bind PF10412.4 386 0.00017 14.7 0.0 1 1 4.7e-06 0.00029 14.0 0.0 15 62 212 259 206 314 0.75 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 3_10 - 489 AAA_11 PF13086.1 236 0.00097 13.2 0.1 1 1 4.2e-06 0.0013 12.8 0.1 6 44 191 238 187 468 0.83 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 2_45 - 478 Sigma54_activ_2 PF14532.1 138 3.4e-05 18.4 0.0 1 1 8.5e-07 8.6e-05 17.1 0.0 3 44 217 258 215 277 0.87 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_33 - 509 Sigma54_activ_2 PF14532.1 138 0.0025 12.4 0.0 1 1 6.8e-05 0.0069 10.9 0.0 25 49 47 71 36 88 0.85 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_99 - 444 Sigma54_activ_2 PF14532.1 138 0.0032 12.0 0.0 1 1 9.6e-05 0.0097 10.4 0.0 16 44 207 235 199 261 0.82 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_2 - 606 T4SS-DNA_transf PF02534.9 469 1.3e-28 94.2 1.3 1 2 4.3e-25 4.3e-23 76.0 0.4 31 258 164 409 134 414 0.73 # 1295 # 3112 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_2 - 606 T4SS-DNA_transf PF02534.9 469 1.3e-28 94.2 1.3 2 2 3.4e-07 3.5e-05 17.0 0.0 259 314 539 595 518 602 0.92 # 1295 # 3112 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 2_64 - 698 T4SS-DNA_transf PF02534.9 469 4.8e-11 36.3 0.7 1 2 0.00078 0.079 5.9 0.0 41 65 213 239 171 248 0.67 # 61478 # 63571 # 1 # ID=2_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.349 2_64 - 698 T4SS-DNA_transf PF02534.9 469 4.8e-11 36.3 0.7 2 2 2.8e-10 2.9e-08 27.1 0.7 73 418 276 653 271 674 0.72 # 61478 # 63571 # 1 # ID=2_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.349 1_3 - 273 T4SS-DNA_transf PF02534.9 469 3.8e-10 33.3 1.1 1 1 3.7e-12 3.8e-10 33.3 1.1 335 433 3 97 1 127 0.80 # 3133 # 3951 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_30 - 397 NAD_binding_5 PF07994.7 295 0.0031 11.5 0.9 1 1 2e-05 0.006 10.5 0.9 58 189 175 326 149 330 0.83 # 26575 # 27765 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.297 1_82 - 289 ArgK PF03308.11 267 3.2e-05 17.3 0.0 1 1 1.9e-07 5.6e-05 16.5 0.0 38 82 16 59 6 91 0.85 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 2_45 - 478 RNA_helicase PF00910.17 107 0.00016 16.3 0.0 1 1 4.9e-06 0.0005 14.7 0.0 1 31 238 265 238 287 0.77 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_99 - 444 RNA_helicase PF00910.17 107 0.00035 15.2 0.0 1 1 1.1e-05 0.0011 13.6 0.0 1 75 215 292 215 317 0.75 # 89951 # 91282 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.354 1_33 - 509 RNA_helicase PF00910.17 107 0.00041 15.0 0.4 1 2 0.00055 0.056 8.1 0.1 2 26 47 71 46 88 0.71 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_33 - 509 RNA_helicase PF00910.17 107 0.00041 15.0 0.4 2 2 0.02 2.1 3.1 0.0 49 94 215 263 190 269 0.82 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_5 - 39 TrkA_N PF02254.13 116 0.00017 16.1 0.4 1 1 5.8e-07 0.00018 16.0 0.4 1 36 3 38 3 38 0.93 # 3089 # 3205 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333 5_11 - 328 S1 PF00575.18 74 4.4e-05 18.0 5.6 1 3 0.022 6.8 1.4 0.0 20 46 82 119 77 137 0.71 # 7716 # 8699 # -1 # ID=5_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_11 - 328 S1 PF00575.18 74 4.4e-05 18.0 5.6 2 3 5.9e-06 0.0018 12.9 0.6 5 68 156 218 152 221 0.91 # 7716 # 8699 # -1 # ID=5_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_11 - 328 S1 PF00575.18 74 4.4e-05 18.0 5.6 3 3 0.0031 0.93 4.2 0.4 6 27 244 266 240 269 0.88 # 7716 # 8699 # -1 # ID=5_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.387 1_9 - 645 AAA_24 PF13479.1 213 0.0012 12.9 0.1 1 1 1.7e-05 0.005 10.9 0.0 3 27 247 271 245 279 0.86 # 8199 # 10133 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.365 1_33 - 509 NACHT PF05729.7 166 5.8e-07 23.8 0.1 1 2 8.2e-06 0.0025 12.0 0.0 4 29 47 72 44 85 0.88 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_33 - 509 NACHT PF05729.7 166 5.8e-07 23.8 0.1 2 2 7.4e-05 0.022 8.8 0.0 50 100 184 242 177 294 0.69 # 29450 # 30976 # 1 # ID=1_33;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.291 3_10 - 489 AAA_25 PF13481.1 194 0.00033 14.6 0.0 1 1 7.8e-06 0.00079 13.3 0.0 29 58 202 228 186 318 0.78 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 2_45 - 478 AAA_25 PF13481.1 194 0.00058 13.8 0.0 1 1 1.3e-05 0.0013 12.6 0.0 36 77 238 279 206 281 0.84 # 41380 # 42813 # -1 # ID=2_45;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 1_82 - 289 AAA_25 PF13481.1 194 0.0012 12.7 0.0 1 1 7.9e-05 0.008 10.0 0.0 37 73 11 49 5 54 0.84 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 1_82 - 289 AAA_5 PF07728.9 139 0.00011 16.4 0.0 1 1 1.2e-06 0.00018 15.7 0.0 9 67 17 79 15 108 0.86 # 74369 # 75235 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.317 3_10 - 489 AAA_5 PF07728.9 139 0.00048 14.3 0.0 1 1 1.1e-05 0.0016 12.6 0.0 3 94 207 298 206 340 0.72 # 6709 # 8175 # -1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 2_46 - 273 APS_kinase PF01583.15 157 0.00022 15.4 0.0 1 1 1.4e-06 0.00041 14.5 0.0 10 57 14 61 6 71 0.88 # 42830 # 43648 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.371 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/58bcf2f8-5b11-404e-b77b-758ad6faa8d8 # Target file: checkm_output/bins/pGCA_000832965.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000832965.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/58bcf2f8-5b11-404e-b77b-758ad6faa8d8 checkm_output/bins/pGCA_000832965.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:42:56 2020 # [ok]