# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_24 - 252 Eno-Rase_NADH_b PF12242.3 78 0.00014 16.5 0.2 1 1 1e-06 0.00042 15.0 0.1 42 64 7 27 2 42 0.77 # 19174 # 19929 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.349 2_12 - 159 Methyltransf_12 PF08242.7 99 4.9e-16 53.9 0.0 1 1 3.1e-18 6.3e-16 53.6 0.0 11 99 2 102 1 102 0.96 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_102 - 348 Methyltransf_12 PF08242.7 99 8.5e-09 30.7 0.0 1 1 7.5e-11 1.5e-08 29.9 0.0 1 98 180 276 180 277 0.95 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 2_12 - 159 UPF0020 PF01170.13 180 0.0032 11.9 0.1 1 1 1.5e-05 0.006 11.0 0.1 61 111 11 61 2 64 0.81 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_80 - 363 Saccharop_dh PF03435.13 386 3.3e-08 27.7 0.0 1 2 2.5e-10 1e-07 26.1 0.0 1 141 6 144 6 185 0.79 # 63831 # 64919 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.368 1_80 - 363 Saccharop_dh PF03435.13 386 3.3e-08 27.7 0.0 2 2 0.045 18 -1.1 0.0 335 366 303 337 266 357 0.70 # 63831 # 64919 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.368 1_24 - 252 DUF1776 PF08643.5 299 2e-05 18.7 0.1 1 1 7.5e-08 3e-05 18.1 0.1 18 205 18 194 2 219 0.72 # 19174 # 19929 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.349 1_102 - 348 Methyltransf_18 PF12847.2 112 6e-13 44.3 0.0 1 1 5.1e-15 1e-12 43.5 0.0 3 110 177 280 175 282 0.89 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 2_12 - 159 Methyltransf_18 PF12847.2 112 1.2e-07 27.2 0.0 1 1 8.4e-10 1.7e-07 26.7 0.0 24 110 10 105 3 107 0.83 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_64 - 342 Gp_dh_N PF00044.19 151 0.0011 13.9 0.1 1 1 4.8e-06 0.0019 13.0 0.1 4 135 10 140 7 164 0.86 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 2_51 - 847 DUF87 PF01935.12 229 6.5e-09 30.8 0.6 1 1 2.4e-10 3.3e-08 28.5 0.3 25 82 470 528 465 654 0.89 # 41315 # 43855 # -1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.364 5_19 - 1511 DUF87 PF01935.12 229 1.7e-08 29.4 1.4 1 2 0.00028 0.038 8.6 0.1 16 48 658 692 648 708 0.68 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 DUF87 PF01935.12 229 1.7e-08 29.4 1.4 2 2 9.4e-07 0.00013 16.7 0.0 24 51 1010 1037 997 1049 0.79 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 2_28 - 389 DUF87 PF01935.12 229 3.7e-06 21.8 0.7 1 1 8.7e-08 1.2e-05 20.1 0.6 23 49 144 170 132 241 0.91 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 3_38 - 227 NB-ARC PF00931.17 287 0.0031 11.2 0.1 1 1 1.2e-05 0.005 10.5 0.1 20 39 32 51 22 69 0.84 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_65 - 321 NmrA PF05368.8 233 2.5e-08 28.3 0.0 1 2 2.6e-08 5.2e-06 20.7 0.0 1 65 3 71 3 94 0.78 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 1_65 - 321 NmrA PF05368.8 233 2.5e-08 28.3 0.0 2 2 0.0013 0.26 5.4 0.0 159 222 197 258 184 265 0.82 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 1_64 - 342 NmrA PF05368.8 233 1e-07 26.3 0.2 1 1 7.3e-10 1.5e-07 25.8 0.2 1 130 8 148 8 247 0.76 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 5_19 - 1511 AAA_22 PF13401.1 131 2.9e-11 38.5 0.2 1 2 8e-08 8e-06 20.9 0.0 4 122 666 816 662 820 0.65 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 AAA_22 PF13401.1 131 2.9e-11 38.5 0.2 2 2 3e-05 0.003 12.6 0.0 3 99 1008 1125 1004 1156 0.66 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 2_28 - 389 AAA_22 PF13401.1 131 1e-06 23.8 0.1 1 1 3.1e-08 3.1e-06 22.2 0.1 5 114 145 276 119 294 0.68 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 1_93 - 256 AAA_22 PF13401.1 131 2.8e-05 19.1 0.0 1 2 7.7e-05 0.0078 11.2 0.0 6 26 36 56 31 92 0.84 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_93 - 256 AAA_22 PF13401.1 131 2.8e-05 19.1 0.0 2 2 0.011 1.1 4.2 0.0 80 123 151 202 134 211 0.77 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 AAA_22 PF13401.1 131 0.00015 16.8 0.3 1 1 9e-06 0.0009 14.3 0.3 3 22 30 49 28 206 0.93 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 2_12 - 159 Methyltransf_11 PF08241.7 95 7.2e-13 43.8 0.0 1 1 5.1e-15 1e-12 43.3 0.0 17 95 8 104 1 104 0.93 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_102 - 348 Methyltransf_11 PF08241.7 95 1.4e-09 33.2 0.0 1 1 1.1e-11 2.3e-09 32.5 0.0 1 95 180 279 180 279 0.90 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 5_17 - 84 YukD PF08817.5 79 1.9e-19 64.9 0.3 1 1 5.1e-22 2e-19 64.8 0.3 1 78 5 82 5 83 0.95 # 13484 # 13735 # 1 # ID=5_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_93 - 256 AAA_15 PF13175.1 415 2.2e-05 18.5 0.1 1 2 0.00059 0.23 5.2 0.2 27 44 39 65 19 148 0.75 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_93 - 256 AAA_15 PF13175.1 415 2.2e-05 18.5 0.1 2 2 7.3e-06 0.0029 11.5 0.0 371 413 162 206 148 208 0.88 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_93 - 256 AAA_17 PF13207.1 121 2.3e-05 20.1 0.0 1 1 2.3e-07 4.6e-05 19.1 0.0 3 47 38 88 36 147 0.61 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 AAA_17 PF13207.1 121 0.00049 15.8 0.3 1 1 4.8e-06 0.00097 14.8 0.3 2 19 34 51 33 138 0.86 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 3_38 - 227 AAA_21 PF13304.1 303 3e-13 45.2 0.0 1 2 1.3e-07 2.7e-05 19.1 0.0 3 44 35 83 33 110 0.74 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 3_38 - 227 AAA_21 PF13304.1 303 3e-13 45.2 0.0 2 2 3.3e-09 6.6e-07 24.4 0.0 235 299 140 201 119 205 0.91 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_93 - 256 AAA_21 PF13304.1 303 9.7e-11 37.0 1.2 1 2 1.2e-06 0.00024 16.0 0.9 2 31 37 68 36 106 0.65 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_93 - 256 AAA_21 PF13304.1 303 9.7e-11 37.0 1.2 2 2 7.9e-08 1.6e-05 19.9 0.1 168 299 90 205 63 207 0.65 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 MobB PF03205.9 140 0.0017 12.9 0.1 1 2 2.3e-05 0.0093 10.5 0.0 3 19 34 50 32 54 0.89 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 3_38 - 227 MobB PF03205.9 140 0.0017 12.9 0.1 2 2 0.083 33 -1.0 0.0 44 69 181 203 167 220 0.58 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_80 - 363 Semialdhyde_dh PF01118.19 121 5.1e-06 21.7 0.0 1 1 5.3e-08 1.1e-05 20.6 0.0 2 69 6 68 5 109 0.72 # 63831 # 64919 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.368 1_64 - 342 Semialdhyde_dh PF01118.19 121 0.0028 12.8 0.0 1 1 5.2e-05 0.011 11.0 0.0 1 46 7 51 7 91 0.65 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 2_28 - 389 T2SE PF00437.15 272 0.0011 12.7 0.1 1 1 6.5e-06 0.0026 11.5 0.0 129 152 145 168 120 177 0.83 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 1_102 - 348 CMAS PF02353.15 273 5.5e-06 20.5 0.0 1 1 2e-08 8.2e-06 19.9 0.0 55 173 168 288 156 305 0.88 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_64 - 342 Shikimate_DH PF01488.15 135 9.1e-05 17.4 0.0 1 1 5e-07 0.0002 16.3 0.0 10 87 3 88 1 125 0.77 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 2_28 - 389 Zeta_toxin PF06414.7 201 0.00062 13.8 0.0 1 1 3.5e-06 0.0014 12.6 0.0 19 94 147 223 139 239 0.72 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 1_64 - 342 F420_oxidored PF03807.12 96 0.00084 14.7 0.1 1 2 3.4e-05 0.014 10.8 0.0 3 47 9 51 7 91 0.77 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 1_64 - 342 F420_oxidored PF03807.12 96 0.00084 14.7 0.1 2 2 0.088 35 -0.2 0.0 27 75 121 171 106 193 0.57 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 3_38 - 227 SMC_N PF02463.14 220 1.9e-08 28.6 0.5 1 1 2.1e-08 4.1e-06 21.0 0.5 24 205 31 207 23 219 0.71 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_93 - 256 SMC_N PF02463.14 220 6.9e-05 17.0 1.1 1 1 1.6e-05 0.0032 11.6 1.1 26 203 36 209 19 221 0.63 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 2_28 - 389 Arch_ATPase PF01637.13 234 8.7e-07 23.7 0.1 1 1 1e-08 2.1e-06 22.5 0.1 20 131 144 260 134 274 0.76 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 1_93 - 256 Arch_ATPase PF01637.13 234 0.0022 12.6 0.1 1 1 5.8e-05 0.012 10.2 0.1 21 150 35 193 22 213 0.54 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_93 - 256 AAA_16 PF13191.1 185 5.7e-06 21.3 0.1 1 1 1.3e-07 1.3e-05 20.1 0.1 22 175 32 189 21 209 0.57 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 AAA_16 PF13191.1 185 9.6e-05 17.3 0.2 1 1 1.2e-06 0.00012 16.9 0.2 20 44 27 50 20 167 0.91 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 2_28 - 389 AAA_16 PF13191.1 185 0.00018 16.4 0.0 1 1 2.8e-06 0.00028 15.7 0.0 22 50 142 170 132 263 0.88 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 5_19 - 1511 AAA_16 PF13191.1 185 0.0016 13.3 0.0 1 2 0.00055 0.055 8.3 0.0 24 88 666 735 658 812 0.67 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 AAA_16 PF13191.1 185 0.0016 13.3 0.0 2 2 0.054 5.4 1.8 0.0 28 68 1013 1057 999 1093 0.78 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 4_61 - 162 AAA_23 PF13476.1 202 0.00022 16.4 12.1 1 1 2e-06 0.00027 16.2 12.1 68 180 25 159 10 161 0.71 # 50005 # 50490 # -1 # ID=4_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.305 1_93 - 256 AAA_23 PF13476.1 202 0.00036 15.8 2.7 1 1 4.3e-06 0.00057 15.1 0.3 13 38 25 53 19 57 0.84 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 AAA_23 PF13476.1 202 0.003 12.7 0.2 1 1 4e-05 0.0054 11.9 0.2 22 39 34 51 18 54 0.84 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_93 - 256 AAA_18 PF13238.1 129 0.00017 16.8 0.2 1 1 2.6e-06 0.00053 15.2 0.2 3 28 39 90 38 140 0.67 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 AAA_18 PF13238.1 129 0.00072 14.7 0.0 1 2 2.6e-05 0.0052 12.0 0.0 1 18 34 51 34 123 0.79 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 3_38 - 227 AAA_18 PF13238.1 129 0.00072 14.7 0.0 2 2 0.076 15 0.8 0.0 49 97 170 212 140 221 0.76 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_24 - 252 adh_short PF00106.20 167 1.7e-24 81.5 0.0 1 1 3.5e-26 4.6e-24 80.0 0.0 3 166 7 175 5 176 0.94 # 19174 # 19929 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.349 1_64 - 342 adh_short PF00106.20 167 1.5e-08 29.6 0.0 1 1 1.8e-10 2.4e-08 28.9 0.0 1 158 6 147 6 152 0.85 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 1_65 - 321 adh_short PF00106.20 167 7.6e-07 24.0 0.0 1 1 1e-08 1.4e-06 23.2 0.0 3 131 3 118 2 132 0.78 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 5_3 - 131 AAA_13 PF13166.1 712 0.0043 10.3 16.9 1 2 3.2e-06 0.00064 13.1 11.5 370 459 11 99 2 104 0.90 # 2142 # 2534 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.298 5_3 - 131 AAA_13 PF13166.1 712 0.0043 10.3 16.9 2 2 0.016 3.2 0.8 0.5 90 112 102 124 98 130 0.51 # 2142 # 2534 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.298 6_2 - 412 AAA_13 PF13166.1 712 0.021 8.1 31.7 1 2 0.00095 0.19 4.9 2.6 395 443 40 88 9 125 0.67 # 1342 # 2577 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.349 6_2 - 412 AAA_13 PF13166.1 712 0.021 8.1 31.7 2 2 5.9e-05 0.012 8.9 21.4 312 485 211 391 175 405 0.77 # 1342 # 2577 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.349 1_64 - 342 Polysacc_synt_2 PF02719.10 294 7.1e-101 331.8 2.7 1 1 4.1e-103 8.2e-101 331.6 2.7 1 292 8 291 8 293 0.96 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 1_65 - 321 Polysacc_synt_2 PF02719.10 294 5.6e-21 69.5 0.0 1 1 7.1e-23 1.4e-20 68.2 0.0 1 243 3 257 3 278 0.79 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 2_12 - 159 Methyltransf_25 PF13649.1 101 1.7e-08 29.7 0.0 1 1 1.2e-10 2.5e-08 29.1 0.0 22 101 10 100 2 100 0.85 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_102 - 348 Methyltransf_25 PF13649.1 101 3e-06 22.4 0.0 1 1 2.5e-08 5e-06 21.7 0.0 2 101 180 275 179 275 0.90 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_85 - 176 B5 PF03484.10 70 0.0016 13.2 0.2 1 2 0.034 13 0.6 0.0 5 30 19 43 16 59 0.70 # 68473 # 69000 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.301 1_85 - 176 B5 PF03484.10 70 0.0016 13.2 0.2 2 2 3.8e-05 0.015 10.0 0.1 7 38 126 158 120 174 0.82 # 68473 # 69000 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.301 3_38 - 227 AAA_29 PF13555.1 62 4.7e-06 21.0 0.1 1 1 8.1e-08 8.1e-06 20.2 0.1 17 41 26 49 20 62 0.81 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_93 - 256 AAA_29 PF13555.1 62 8.8e-06 20.1 0.1 1 1 2e-07 2e-05 19.0 0.1 11 44 20 55 16 64 0.75 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 2_28 - 389 AAA_29 PF13555.1 62 0.00023 15.5 0.0 1 1 4.5e-06 0.00045 14.6 0.0 20 40 141 161 130 171 0.82 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 5_19 - 1511 AAA_29 PF13555.1 62 0.0017 12.8 0.0 1 2 0.00029 0.029 8.8 0.0 23 43 666 686 657 697 0.81 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 AAA_29 PF13555.1 62 0.0017 12.8 0.0 2 2 0.094 9.5 0.8 0.0 31 44 1017 1030 1000 1038 0.73 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 2_12 - 159 Ubie_methyltran PF01209.13 233 1.2e-05 19.3 0.3 1 1 1.8e-07 7.2e-05 16.8 0.3 73 151 9 104 1 118 0.72 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 252 KR PF08659.5 181 5.8e-12 40.5 0.0 1 1 8.8e-14 1.2e-11 39.5 0.0 4 116 8 122 6 147 0.87 # 19174 # 19929 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.349 1_64 - 342 KR PF08659.5 181 0.00024 15.7 0.0 1 1 2.7e-06 0.00037 15.1 0.0 3 109 8 101 7 148 0.73 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 1_65 - 321 KR PF08659.5 181 0.00029 15.4 0.0 1 1 4e-06 0.00053 14.5 0.0 3 131 3 118 2 126 0.68 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 2_35 - 266 KH_3 PF13014.1 43 0.00018 16.0 1.4 1 2 0.00015 0.059 8.0 0.1 9 37 36 63 35 67 0.75 # 29131 # 29928 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.352 2_35 - 266 KH_3 PF13014.1 43 0.00018 16.0 1.4 2 2 0.00048 0.19 6.4 0.1 8 28 102 122 102 133 0.84 # 29131 # 29928 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.352 1_16 - 160 CobU PF02283.11 167 0.0005 14.4 0.0 1 1 1e-05 0.00068 13.9 0.0 37 121 59 138 48 149 0.84 # 14623 # 15102 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.377 4_59 - 175 CobU PF02283.11 167 0.00097 13.4 0.0 1 1 2.1e-05 0.0014 12.9 0.0 37 121 22 101 13 112 0.83 # 49309 # 49833 # 1 # ID=4_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.375 4_5 - 91 CobU PF02283.11 167 0.0011 13.3 0.3 1 1 1.8e-05 0.0012 13.1 0.3 22 65 38 87 31 90 0.77 # 5774 # 6046 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.385 4_28 - 192 CobU PF02283.11 167 0.0021 12.3 0.0 1 1 5.1e-05 0.0034 11.6 0.0 37 120 15 93 7 99 0.75 # 21781 # 22356 # 1 # ID=4_28;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_36 - 187 CobU PF02283.11 167 0.0022 12.3 0.1 1 1 4.7e-05 0.0031 11.8 0.1 37 119 22 99 9 110 0.72 # 40382 # 40942 # 1 # ID=3_36;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.390 4_16 - 236 CobU PF02283.11 167 0.0029 11.9 0.1 1 1 6.6e-05 0.0044 11.3 0.1 37 121 59 138 44 149 0.84 # 12867 # 13574 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.383 1_93 - 256 MMR_HSR1 PF01926.18 116 0.00034 15.5 0.4 1 1 3.2e-06 0.00064 14.6 0.4 2 22 37 57 36 226 0.89 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 MMR_HSR1 PF01926.18 116 0.0023 12.8 0.4 1 1 1.9e-05 0.0038 12.1 0.4 2 19 34 51 33 204 0.88 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_93 - 256 DUF258 PF03193.11 161 8.8e-07 23.1 0.0 1 1 6.9e-09 1.4e-06 22.5 0.0 22 65 20 64 4 133 0.74 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 DUF258 PF03193.11 161 6.6e-05 17.0 0.1 1 1 6.1e-07 0.00012 16.1 0.1 35 55 31 51 18 65 0.86 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 2_61 - 1025 TraG-D_C PF12696.2 128 2.3e-13 45.0 0.0 1 1 4.3e-15 8.6e-13 43.2 0.0 5 123 608 728 606 732 0.83 # 53683 # 56757 # -1 # ID=2_61;partial=00;start_type=TTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.348 5_19 - 1511 TraG-D_C PF12696.2 128 0.00052 14.8 0.0 1 1 1e-05 0.0021 12.8 0.0 2 74 778 848 777 857 0.78 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 1_89 - 91 NTPase_1 PF03266.10 168 0.0018 12.8 0.1 1 1 6.1e-06 0.0025 12.4 0.1 16 50 29 64 15 87 0.75 # 71660 # 71932 # -1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 3_38 - 227 AAA_33 PF13671.1 143 0.0011 13.7 1.0 1 1 1.7e-05 0.0066 11.2 1.0 2 17 34 49 33 220 0.71 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 2_12 - 159 Methyltransf_26 PF13659.1 117 8.7e-06 20.7 0.0 1 1 6.6e-08 1.3e-05 20.1 0.0 22 111 10 102 2 105 0.86 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_102 - 348 Methyltransf_26 PF13659.1 117 6.4e-05 17.9 0.0 1 1 5.8e-07 0.00012 17.0 0.0 3 112 178 278 176 280 0.86 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_93 - 256 AAA_30 PF13604.1 196 0.00015 16.2 0.1 1 1 7.6e-06 0.0015 12.9 0.1 14 114 30 184 23 208 0.61 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 AAA_30 PF13604.1 196 0.00022 15.7 0.3 1 2 4.6e-05 0.0092 10.4 0.0 15 38 28 51 22 61 0.79 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 3_38 - 227 AAA_30 PF13604.1 196 0.00022 15.7 0.3 2 2 0.006 1.2 3.5 0.1 73 128 135 198 116 207 0.71 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 5_19 - 1511 FtsK_SpoIIIE PF01580.13 205 1.9e-76 250.9 0.3 1 3 3.5e-38 3.5e-36 119.4 0.0 17 204 642 821 629 822 0.90 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 FtsK_SpoIIIE PF01580.13 205 1.9e-76 250.9 0.3 2 3 2.4e-39 2.4e-37 123.2 0.0 5 200 976 1156 972 1164 0.96 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 FtsK_SpoIIIE PF01580.13 205 1.9e-76 250.9 0.3 3 3 0.018 1.8 2.8 0.1 97 198 1350 1433 1264 1455 0.56 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 2_28 - 389 FtsK_SpoIIIE PF01580.13 205 8e-27 88.9 0.1 1 1 1.1e-28 1.1e-26 88.4 0.1 17 204 121 291 117 292 0.93 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 2_23 - 173 FtsK_SpoIIIE PF01580.13 205 0.00029 15.2 0.0 1 1 4.2e-06 0.00042 14.7 0.0 143 204 27 75 9 76 0.79 # 17869 # 18387 # -1 # ID=2_23;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.337 2_51 - 847 FtsK_SpoIIIE PF01580.13 205 0.00033 15.0 0.1 1 1 1.5e-05 0.0015 12.9 0.1 31 92 460 518 450 527 0.81 # 41315 # 43855 # -1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.364 1_102 - 348 MTS PF05175.9 170 2e-06 22.1 0.0 1 1 2.9e-08 3.9e-06 21.2 0.0 23 139 167 279 152 306 0.85 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 4_63 - 172 MTS PF05175.9 170 0.00014 16.2 0.0 1 1 1.6e-06 0.00021 15.6 0.0 40 123 16 98 11 109 0.85 # 51270 # 51785 # -1 # ID=4_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 2_12 - 159 MTS PF05175.9 170 0.00078 13.7 0.0 1 1 9.4e-06 0.0013 13.0 0.0 52 139 8 104 3 123 0.77 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_93 - 256 Dynamin_N PF00350.18 168 0.0033 12.1 0.1 1 1 1.3e-05 0.0052 11.5 0.1 3 44 39 79 38 204 0.89 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_93 - 256 ABC_tran PF00005.22 137 2.5e-35 116.6 0.0 1 1 2.8e-37 3.8e-35 116.0 0.0 1 136 24 172 24 173 0.92 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 ABC_tran PF00005.22 137 1.8e-33 110.6 0.0 1 1 1.8e-35 2.5e-33 110.2 0.0 1 136 21 169 21 170 0.89 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 2_28 - 389 ABC_tran PF00005.22 137 0.0013 13.9 0.0 1 1 1.9e-05 0.0026 13.0 0.0 14 51 147 186 142 296 0.70 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 1_93 - 256 TIGR03263 TIGR03263 180 0.0031 11.7 0.0 1 1 1.4e-05 0.0058 10.8 0.0 5 23 38 56 34 70 0.82 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_65 - 321 NAD_binding_4 PF07993.7 249 1.2e-19 65.1 0.0 1 1 4.3e-21 8.6e-19 62.3 0.0 1 246 5 223 5 226 0.72 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 1_64 - 342 NAD_binding_4 PF07993.7 249 7.6e-12 39.5 3.6 1 2 7.8e-11 1.6e-08 28.6 0.7 3 136 12 129 10 134 0.74 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 1_64 - 342 NAD_binding_4 PF07993.7 249 7.6e-12 39.5 3.6 2 2 4.2e-05 0.0084 9.9 0.1 163 201 132 185 127 222 0.68 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 2_51 - 847 AAA_19 PF13245.1 76 0.004 11.8 1.0 1 1 2e-05 0.0082 10.8 1.0 13 53 471 507 456 510 0.82 # 41315 # 43855 # -1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.364 1_102 - 348 Methyltransf_2 PF00891.13 242 1.5e-48 159.9 0.0 1 1 4.8e-51 1.9e-48 159.6 0.0 2 241 78 320 77 321 0.95 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_65 - 321 RmlD_sub_bind PF04321.12 287 1.3e-22 74.8 0.0 1 1 8.5e-25 1.7e-22 74.5 0.0 1 231 1 261 1 282 0.88 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 1_64 - 342 RmlD_sub_bind PF04321.12 287 6.5e-11 36.4 0.0 1 1 1.1e-11 2.3e-09 31.4 0.0 2 175 7 193 6 220 0.80 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 1_65 - 321 NAD_binding_10 PF13460.1 183 3.2e-12 41.7 0.0 1 1 3.3e-14 4.4e-12 41.2 0.0 1 153 3 184 3 229 0.77 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 1_64 - 342 NAD_binding_10 PF13460.1 183 3.8e-09 31.7 0.0 1 1 3.4e-10 4.6e-08 28.1 0.0 1 117 8 148 8 247 0.63 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 1_80 - 363 NAD_binding_10 PF13460.1 183 7.7e-08 27.4 0.0 1 1 9.2e-10 1.2e-07 26.7 0.0 1 97 6 125 6 151 0.81 # 63831 # 64919 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.368 2_51 - 847 AAA_10 PF12846.2 304 7.1e-45 148.5 0.2 1 1 2.1e-46 1.2e-44 147.8 0.2 3 303 470 767 468 768 0.91 # 41315 # 43855 # -1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.364 5_19 - 1511 AAA_10 PF12846.2 304 3.3e-14 47.8 2.5 1 3 0.0023 0.13 6.4 0.1 2 25 667 691 666 734 0.74 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 AAA_10 PF12846.2 304 3.3e-14 47.8 2.5 2 3 5.6e-09 3.2e-07 24.9 0.0 214 296 767 850 724 855 0.83 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 AAA_10 PF12846.2 304 3.3e-14 47.8 2.5 3 3 5.5e-05 0.0032 11.8 0.0 2 29 1010 1037 1009 1070 0.83 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 2_28 - 389 AAA_10 PF12846.2 304 4e-08 27.8 0.3 1 2 7.1e-05 0.0041 11.4 0.0 2 27 145 170 144 201 0.79 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 2_28 - 389 AAA_10 PF12846.2 304 4e-08 27.8 0.3 2 2 6.4e-06 0.00037 14.9 0.0 199 289 210 313 194 321 0.77 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 3_38 - 227 AAA_10 PF12846.2 304 1.8e-05 19.1 0.1 1 2 4.4e-06 0.00025 15.4 0.0 6 23 36 53 33 74 0.82 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 3_38 - 227 AAA_10 PF12846.2 304 1.8e-05 19.1 0.1 2 2 0.058 3.3 1.8 0.0 215 262 154 200 102 221 0.83 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 2_61 - 1025 AAA_10 PF12846.2 304 7.2e-05 17.2 0.0 1 1 7e-06 0.0004 14.7 0.0 3 294 286 675 284 685 0.64 # 53683 # 56757 # -1 # ID=2_61;partial=00;start_type=TTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.348 1_93 - 256 AAA_10 PF12846.2 304 0.00012 16.5 0.1 1 2 6.1e-05 0.0035 11.6 0.0 6 22 39 55 35 67 0.82 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_93 - 256 AAA_10 PF12846.2 304 0.00012 16.5 0.1 2 2 0.036 2.1 2.5 0.0 213 262 160 204 118 207 0.88 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 2_23 - 173 AAA_10 PF12846.2 304 0.00012 16.4 0.0 1 1 2.5e-06 0.00014 16.2 0.0 214 289 26 97 1 105 0.78 # 17869 # 18387 # -1 # ID=2_23;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.337 1_24 - 252 adh_short_C2 PF13561.1 241 2e-30 101.2 0.3 1 1 5.9e-33 2.4e-30 100.9 0.3 5 241 13 250 11 250 0.95 # 19174 # 19929 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.349 3_38 - 227 SbcCD_C PF13558.1 90 0.00048 14.9 0.1 1 1 1.7e-05 0.0034 12.2 0.1 31 89 140 185 117 186 0.78 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_93 - 256 SbcCD_C PF13558.1 90 0.0012 13.6 0.3 1 1 2.4e-05 0.0049 11.7 0.3 61 89 160 188 115 189 0.83 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_65 - 321 3Beta_HSD PF01073.14 280 2e-24 80.6 0.2 1 1 1.3e-26 2.6e-24 80.2 0.2 1 229 4 230 4 241 0.82 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 1_64 - 342 3Beta_HSD PF01073.14 280 1.8e-22 74.2 0.1 1 2 4.6e-24 9.3e-22 71.8 0.1 1 122 9 133 9 140 0.86 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 1_64 - 342 3Beta_HSD PF01073.14 280 1.8e-22 74.2 0.1 2 2 0.014 2.8 1.4 0.0 143 202 134 190 130 204 0.72 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 2_12 - 159 Methyltransf_31 PF13847.1 152 2.6e-11 38.2 0.1 1 1 1.5e-13 3e-11 38.0 0.1 23 112 6 108 1 148 0.81 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 1_102 - 348 Methyltransf_31 PF13847.1 152 2e-08 28.9 0.0 1 1 1.9e-10 3.8e-08 27.9 0.0 2 136 174 303 173 324 0.79 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_64 - 342 DXP_reductoisom PF02670.11 129 0.00033 16.1 0.0 1 1 2.3e-06 0.00093 14.6 0.0 1 114 8 120 8 127 0.81 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 2_28 - 389 Viral_helicase1 PF01443.13 234 0.00092 13.6 0.1 1 2 1.7e-05 0.007 10.7 0.0 2 66 148 211 147 213 0.87 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 2_28 - 389 Viral_helicase1 PF01443.13 234 0.00092 13.6 0.1 2 2 0.018 7.2 0.9 0.0 35 75 219 260 208 275 0.79 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 1_65 - 321 Epimerase PF01370.16 236 8.3e-61 200.2 0.0 1 1 1e-62 1e-60 200.0 0.0 1 236 3 243 3 243 0.97 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 1_64 - 342 Epimerase PF01370.16 236 4e-23 76.9 0.1 1 1 5.5e-24 5.6e-22 73.2 0.1 1 200 8 194 8 205 0.88 # 48351 # 49376 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=11-12bp;gc_cont=0.318 1_80 - 363 Epimerase PF01370.16 236 2.5e-05 18.6 0.0 1 1 3.8e-07 3.8e-05 18.1 0.0 1 73 6 77 6 83 0.90 # 63831 # 64919 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.368 1_24 - 252 Epimerase PF01370.16 236 6.5e-05 17.3 0.1 1 1 1.2e-06 0.00012 16.4 0.1 1 64 7 76 7 144 0.80 # 19174 # 19929 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.349 3_38 - 227 DEAD PF00270.24 169 0.00013 16.3 0.0 1 1 5.4e-07 0.00022 15.6 0.0 11 154 27 192 15 202 0.77 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 2_28 - 389 DUF815 PF05673.8 250 0.00027 14.7 0.1 1 1 1.4e-06 0.00055 13.7 0.0 52 79 143 170 132 207 0.79 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 1_108 - 4970 Pyr_redox PF00070.22 80 0.0019 13.5 0.2 1 1 3.2e-05 0.013 10.8 0.2 7 75 4792 4863 4792 4868 0.87 # 106584 # 121493 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.417 5_19 - 1511 DUF853 PF05872.7 504 0.0002 14.7 0.0 1 2 1.4e-05 0.0028 10.9 0.0 13 59 658 708 650 718 0.81 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 DUF853 PF05872.7 504 0.0002 14.7 0.0 2 2 0.02 4 0.5 0.0 256 308 775 826 758 851 0.79 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 2_28 - 389 DUF853 PF05872.7 504 0.003 10.8 0.0 1 2 0.00025 0.051 6.7 0.0 17 58 140 185 125 218 0.76 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 2_28 - 389 DUF853 PF05872.7 504 0.003 10.8 0.0 2 2 0.0072 1.4 1.9 0.0 253 302 243 290 236 300 0.88 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 2_61 - 1025 TrwB_AAD_bind PF10412.4 386 2.3e-08 27.9 0.0 1 2 0.003 0.4 4.0 0.0 13 32 282 301 273 314 0.86 # 53683 # 56757 # -1 # ID=2_61;partial=00;start_type=TTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.348 2_61 - 1025 TrwB_AAD_bind PF10412.4 386 2.3e-08 27.9 0.0 2 2 2e-08 2.7e-06 21.1 0.0 234 367 594 733 545 746 0.70 # 53683 # 56757 # -1 # ID=2_61;partial=00;start_type=TTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.348 2_28 - 389 TrwB_AAD_bind PF10412.4 386 0.00021 14.9 0.0 1 2 4.2e-05 0.0056 10.1 0.0 12 39 141 168 135 173 0.88 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 2_28 - 389 TrwB_AAD_bind PF10412.4 386 0.00021 14.9 0.0 2 2 0.0096 1.3 2.4 0.0 237 281 240 289 232 292 0.78 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 5_19 - 1511 TrwB_AAD_bind PF10412.4 386 0.00062 13.3 0.1 1 3 0.00019 0.026 7.9 0.0 6 34 657 685 654 713 0.88 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 TrwB_AAD_bind PF10412.4 386 0.00062 13.3 0.1 2 3 0.032 4.2 0.7 0.0 243 283 776 821 762 831 0.83 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 TrwB_AAD_bind PF10412.4 386 0.00062 13.3 0.1 3 3 0.08 11 -0.7 0.0 15 39 1009 1033 1003 1040 0.84 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 2_61 - 1025 T4SS-DNA_transf PF02534.9 469 5.6e-10 33.2 0.0 1 1 1.4e-12 5.6e-10 33.2 0.0 284 418 587 725 536 733 0.76 # 53683 # 56757 # -1 # ID=2_61;partial=00;start_type=TTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.348 1_65 - 321 DapB_N PF01113.15 124 0.00081 14.2 0.1 1 2 8e-05 0.032 9.0 0.0 1 27 1 26 1 65 0.76 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 1_65 - 321 DapB_N PF01113.15 124 0.00081 14.2 0.1 2 2 0.008 3.2 2.6 0.0 80 103 103 126 96 141 0.81 # 49373 # 50335 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.307 2_25 - 302 Ribosomal_S11 PF00411.14 110 0.0037 12.3 0.1 1 1 1.5e-05 0.0061 11.6 0.1 35 100 226 292 216 297 0.78 # 19437 # 20342 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 4_10 - 59 PDH PF02153.12 258 0.0012 12.5 0.0 1 1 3.1e-06 0.0013 12.5 0.0 94 151 2 54 1 58 0.86 # 9692 # 9868 # 1 # ID=4_10;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_102 - 348 Methyltransf_23 PF13489.1 161 3.8e-07 24.8 0.0 1 1 2.9e-09 5.9e-07 24.2 0.0 12 159 166 328 157 330 0.72 # 89371 # 90414 # 1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 2_12 - 159 Methyltransf_23 PF13489.1 161 0.00069 14.2 0.0 1 1 4.3e-06 0.00086 13.9 0.0 39 115 4 106 1 137 0.74 # 7402 # 7878 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.386 2_28 - 389 Gtr1_RagA PF04670.7 232 0.00015 15.8 0.0 1 1 8.9e-07 0.00036 14.6 0.0 2 47 147 194 146 225 0.86 # 23002 # 24168 # -1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.385 1_80 - 363 TrkA_N PF02254.13 116 0.0028 12.5 0.0 1 1 1.4e-05 0.0057 11.5 0.0 2 84 8 91 6 107 0.83 # 63831 # 64919 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.368 3_38 - 227 AAA_24 PF13479.1 213 0.00016 16.2 0.0 1 2 0.00046 0.19 6.1 0.0 7 20 35 48 32 57 0.87 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 3_38 - 227 AAA_24 PF13479.1 213 0.00016 16.2 0.0 2 2 0.00012 0.05 8.0 0.0 78 141 145 205 143 218 0.80 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 5_19 - 1511 NACHT PF05729.7 166 3.1e-06 21.8 0.0 1 2 0.019 7.6 1.0 0.0 4 27 670 693 669 706 0.80 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 NACHT PF05729.7 166 3.1e-06 21.8 0.0 2 2 1.6e-07 6.3e-05 17.5 0.0 9 92 1018 1124 1013 1188 0.80 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 AAA_25 PF13481.1 194 2.3e-05 18.7 0.6 1 2 0.0058 0.77 4.0 0.0 36 58 669 691 658 748 0.86 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 5_19 - 1511 AAA_25 PF13481.1 194 2.3e-05 18.7 0.6 2 2 2.4e-05 0.0031 11.8 0.0 25 79 1001 1049 981 1060 0.83 # 15173 # 19705 # 1 # ID=5_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387 1_93 - 256 AAA_25 PF13481.1 194 4.9e-05 17.6 0.0 1 2 1.2e-05 0.0016 12.7 0.0 30 58 31 58 24 137 0.76 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_93 - 256 AAA_25 PF13481.1 194 4.9e-05 17.6 0.0 2 2 0.013 1.7 2.9 0.0 161 188 176 203 165 206 0.88 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 3_38 - 227 AAA_25 PF13481.1 194 0.0005 14.3 0.1 1 1 1.3e-05 0.0017 12.6 0.0 30 50 28 48 19 78 0.86 # 42492 # 43172 # 1 # ID=3_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407 1_93 - 256 AAA_28 PF13521.1 163 0.00067 14.5 0.2 1 2 2e-05 0.0081 11.0 0.1 4 24 39 59 36 71 0.83 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_93 - 256 AAA_28 PF13521.1 163 0.00067 14.5 0.2 2 2 0.04 16 0.3 0.0 60 86 76 101 69 105 0.72 # 75117 # 75884 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.380 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/6457366c-ba2d-4e1a-a6b0-79f8bc711c51 # Target file: checkm_output/bins/pGCA_000832605.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000832605.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6457366c-ba2d-4e1a-a6b0-79f8bc711c51 checkm_output/bins/pGCA_000832605.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:42:46 2020 # [ok]