# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_99 - 223 Thymidylate_kin PF02223.12 186 1.3e-21 70.8 0.2 1 1 7.1e-24 1.5e-21 70.6 0.2 1 183 11 203 11 206 0.85 # 73904 # 74572 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.245 1_1 - 621 Terminase_6 PF03237.10 384 3.6e-10 33.1 0.0 1 1 2.5e-12 5.5e-10 32.5 0.0 4 220 87 335 84 381 0.77 # 1 # 1863 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.318 1_74 - 158 SSB PF00436.20 104 4e-15 49.6 0.1 1 1 9.1e-17 6.6e-15 48.9 0.1 6 103 10 111 4 112 0.90 # 53791 # 54264 # 1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.278 1_20 - 176 SSB PF00436.20 104 1.1e-07 25.7 1.1 1 1 7.4e-09 5.3e-07 23.5 1.1 19 67 21 76 1 140 0.74 # 23136 # 23663 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 264 SSB PF00436.20 104 3e-07 24.3 1.1 1 1 2.9e-08 2.1e-06 21.6 1.1 5 67 11 79 7 124 0.73 # 27844 # 28635 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.279 1_80 - 618 UvrD_C_2 PF13538.1 104 1.3e-13 45.1 0.0 1 1 2.1e-15 4.5e-13 43.3 0.0 54 103 521 584 451 585 0.74 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_124 - 370 AAA_22 PF13401.1 131 0.001 13.2 0.0 1 1 8.1e-05 0.0044 11.2 0.0 4 120 94 262 89 273 0.64 # 86506 # 87615 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.287 1_1 - 621 AAA_22 PF13401.1 131 0.0015 12.6 0.1 1 1 0.00016 0.0089 10.2 0.0 82 116 181 214 89 227 0.72 # 1 # 1863 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.318 1_85 - 780 AAA_22 PF13401.1 131 0.0017 12.5 10.1 1 2 4.6e-05 0.0025 12.0 0.0 4 37 360 397 356 432 0.75 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_85 - 780 AAA_22 PF13401.1 131 0.0017 12.5 10.1 2 2 0.077 4.2 1.5 3.4 40 110 624 710 562 724 0.73 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_80 - 618 AAA_22 PF13401.1 131 0.0023 12.1 1.1 1 2 0.024 1.3 3.2 0.0 8 49 20 62 14 121 0.72 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_80 - 618 AAA_22 PF13401.1 131 0.0023 12.1 1.1 2 2 0.0029 0.16 6.2 0.0 74 117 191 235 129 245 0.74 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_87 - 213 AAA_15 PF13175.1 415 3.6e-09 30.1 5.5 1 1 2.4e-11 5.1e-09 29.6 5.5 245 411 16 185 2 188 0.71 # 65843 # 66481 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 1_85 - 780 MobB PF03205.9 140 0.00085 13.0 1.5 1 3 0.0031 0.67 3.7 0.0 61 111 12 60 7 84 0.79 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_85 - 780 MobB PF03205.9 140 0.00085 13.0 1.5 2 3 0.026 5.6 0.7 0.7 79 126 219 262 168 329 0.61 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_85 - 780 MobB PF03205.9 140 0.00085 13.0 1.5 3 3 0.0022 0.48 4.1 0.0 4 24 364 384 362 393 0.86 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_165 - 59 NAD_binding_8 PF13450.1 68 0.00099 13.1 0.0 1 1 5.2e-06 0.0011 13.0 0.0 6 35 6 35 4 52 0.88 # 151416 # 151592 # -1 # ID=1_165;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.299 1_85 - 780 SMC_N PF02463.14 220 2.3e-10 34.0 0.4 1 1 2.1e-12 2.3e-10 34.0 0.4 2 89 340 413 339 449 0.80 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_87 - 213 SMC_N PF02463.14 220 0.00026 14.2 0.2 1 1 3.2e-06 0.00035 13.8 0.2 125 212 106 199 11 205 0.72 # 65843 # 66481 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 1_76 - 161 Arch_ATPase PF01637.13 234 0.00012 15.8 0.0 1 1 7.5e-07 0.00016 15.4 0.0 21 50 60 95 55 127 0.78 # 54585 # 55067 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308 1_124 - 370 AAA_16 PF13191.1 185 0.00032 14.7 0.0 1 1 2.1e-05 0.0023 11.9 0.0 19 163 89 230 79 253 0.58 # 86506 # 87615 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.287 1_85 - 780 AAA_16 PF13191.1 185 0.0021 12.0 0.0 1 1 4.6e-05 0.005 10.8 0.0 26 63 362 401 342 427 0.78 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_85 - 780 AAA_23 PF13476.1 202 4.1e-19 63.7 13.1 1 2 0.013 2.7 2.2 6.6 68 164 218 310 183 334 0.53 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_85 - 780 AAA_23 PF13476.1 202 4.1e-19 63.7 13.1 2 2 1.9e-21 4.1e-19 63.7 13.1 1 201 342 585 342 586 0.57 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_76 - 161 KaiC PF06745.8 227 2.8e-06 20.6 0.1 1 1 1.9e-08 4.1e-06 20.0 0.1 7 76 47 119 45 156 0.87 # 54585 # 55067 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308 1_76 - 161 AAA_14 PF13173.1 128 0.00075 13.4 0.1 1 1 1e-05 0.0022 11.9 0.1 2 28 59 88 58 160 0.67 # 54585 # 55067 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308 1_41 - 526 AAA_29 PF13555.1 62 9.2e-05 16.0 0.0 1 1 1.9e-06 0.00021 14.8 0.0 25 49 171 195 156 208 0.86 # 35979 # 37556 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.283 1_85 - 780 AAA_29 PF13555.1 62 0.00019 14.9 0.0 1 1 4e-06 0.00043 13.8 0.0 2 50 341 387 340 400 0.83 # 63229 # 65568 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.265 1_80 - 618 UvrD_C PF13361.1 351 1.8e-54 179.4 12.2 1 2 0.034 7.2 -0.1 0.1 63 104 33 75 3 173 0.73 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_80 - 618 UvrD_C PF13361.1 351 1.8e-54 179.4 12.2 2 2 8.4e-57 1.8e-54 179.4 12.2 2 349 270 587 269 589 0.85 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_124 - 370 DnaB_C PF03796.10 259 6.5e-14 45.4 0.1 1 1 9.6e-16 2.1e-13 43.7 0.1 2 223 77 308 76 342 0.71 # 86506 # 87615 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.287 1_196 - 270 Methyltransf_26 PF13659.1 117 0.0025 11.8 0.0 1 1 2.1e-05 0.0045 11.0 0.0 1 30 127 155 127 216 0.83 # 162152 # 162961 # -1 # ID=1_196;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.260 1_80 - 618 AAA_30 PF13604.1 196 1.2e-06 22.2 0.0 1 2 2.6e-08 5.6e-06 20.0 0.0 1 67 2 69 2 90 0.85 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_80 - 618 AAA_30 PF13604.1 196 1.2e-06 22.2 0.0 2 2 0.074 16 -1.0 0.0 113 132 225 243 208 247 0.83 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_41 - 526 FtsK_SpoIIIE PF01580.13 205 5.1e-24 78.8 0.0 1 1 9.1e-26 9.9e-24 77.9 0.0 22 204 153 332 136 333 0.93 # 35979 # 37556 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.283 1_37 - 504 FtsK_SpoIIIE PF01580.13 205 1.1e-12 41.8 0.0 1 1 1.7e-14 1.8e-12 41.1 0.0 18 203 226 403 214 405 0.85 # 32728 # 34239 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.250 1_196 - 270 MTS PF05175.9 170 0.00013 15.4 0.0 1 1 1.1e-06 0.00024 14.5 0.0 26 121 120 210 113 221 0.67 # 162152 # 162961 # -1 # ID=1_196;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.260 1_124 - 370 AAA_35 PF14516.1 331 0.00032 13.3 0.0 1 1 4.6e-06 0.0005 12.7 0.0 33 96 96 158 90 230 0.86 # 86506 # 87615 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.287 1_76 - 161 AAA_35 PF14516.1 331 0.0011 11.6 0.0 1 1 1.3e-05 0.0014 11.3 0.0 30 60 58 88 46 124 0.88 # 54585 # 55067 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308 1_78 - 246 RecA PF00154.16 323 5.6e-46 151.0 0.0 1 1 7.4e-48 8e-46 150.5 0.0 136 314 14 207 2 215 0.85 # 56346 # 57083 # 1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.279 1_76 - 161 RecA PF00154.16 323 1.1e-28 94.1 0.0 1 1 1.3e-30 1.4e-28 93.8 0.0 3 140 10 154 8 157 0.88 # 54585 # 55067 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308 1_80 - 618 AAA_19 PF13245.1 76 1.3e-10 34.9 0.0 1 1 1.5e-12 3.3e-10 33.6 0.0 2 74 10 85 9 87 0.83 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_80 - 618 Helicase_RecD PF05127.9 177 8.2e-05 16.3 0.0 1 2 4.9e-06 0.0011 12.7 0.0 2 55 21 77 20 134 0.80 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_80 - 618 Helicase_RecD PF05127.9 177 8.2e-05 16.3 0.0 2 2 0.026 5.7 0.5 0.0 103 154 222 276 155 296 0.72 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_37 - 504 AAA_10 PF12846.2 304 2.2e-05 18.0 0.2 1 2 0.0025 0.54 3.6 0.0 2 30 245 274 244 293 0.87 # 32728 # 34239 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.250 1_37 - 504 AAA_10 PF12846.2 304 2.2e-05 18.0 0.2 2 2 7.7e-06 0.0017 11.8 0.0 211 294 342 431 320 436 0.84 # 32728 # 34239 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.250 1_56 - 153 NodS PF05401.6 201 0.00091 12.6 0.0 1 1 6.3e-06 0.0014 12.1 0.0 110 142 27 59 2 70 0.76 # 41871 # 42329 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.240 1_1 - 621 AAA_12 PF13087.1 200 2.7e-05 17.6 0.0 1 1 2.1e-07 4.5e-05 16.9 0.0 59 137 63 141 9 170 0.76 # 1 # 1863 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.318 1_196 - 270 Methyltransf_31 PF13847.1 152 1.6e-06 21.8 0.5 1 1 1.9e-08 4e-06 20.5 0.1 4 112 127 227 124 263 0.82 # 162152 # 162961 # -1 # ID=1_196;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.260 1_99 - 223 PPK2 PF03976.9 229 0.00043 13.6 0.0 1 2 5.9e-06 0.0013 12.0 0.0 30 70 4 45 1 53 0.85 # 73904 # 74572 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.245 1_99 - 223 PPK2 PF03976.9 229 0.00043 13.6 0.0 2 2 0.066 14 -1.2 0.0 110 131 117 138 74 178 0.71 # 73904 # 74572 # 1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.245 1_80 - 618 Viral_helicase1 PF01443.13 234 3e-13 43.8 8.2 1 4 0.00073 0.16 5.4 0.2 5 40 23 62 19 79 0.70 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_80 - 618 Viral_helicase1 PF01443.13 234 3e-13 43.8 8.2 2 4 0.0024 0.51 3.7 0.0 163 212 46 99 32 106 0.82 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_80 - 618 Viral_helicase1 PF01443.13 234 3e-13 43.8 8.2 3 4 1.2e-06 0.00026 14.5 0.2 48 163 194 308 170 359 0.68 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_80 - 618 Viral_helicase1 PF01443.13 234 3e-13 43.8 8.2 4 4 4.4e-10 9.5e-08 25.8 0.2 159 232 509 584 457 585 0.70 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_1 - 621 DEAD PF00270.24 169 7.3e-09 29.3 0.0 1 1 5.7e-11 1.2e-08 28.6 0.0 25 161 91 223 67 231 0.75 # 1 # 1863 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.318 1_80 - 618 AAA_11 PF13086.1 236 1.9e-11 37.9 1.7 1 1 1.1e-13 2.3e-11 37.7 0.3 1 228 2 243 2 244 0.71 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_185 - 124 Ribosomal_L19 PF01245.15 113 0.0012 12.7 0.0 1 1 6.6e-06 0.0014 12.4 0.0 29 65 26 62 8 85 0.88 # 156481 # 156852 # -1 # ID=1_185;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.231 1_196 - 270 TIGR00755 TIGR00755 256 0.0017 11.3 0.0 1 1 1.4e-05 0.003 10.5 0.0 23 115 120 212 106 223 0.76 # 162152 # 162961 # -1 # ID=1_196;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.260 1_196 - 270 Methyltransf_23 PF13489.1 161 0.0015 12.2 0.0 1 1 1e-05 0.0022 11.7 0.0 7 83 115 193 110 238 0.79 # 162152 # 162961 # -1 # ID=1_196;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.260 1_76 - 161 UPF0079 PF02367.12 123 0.0012 12.5 0.0 1 2 0.053 11 -0.4 0.0 24 51 21 47 10 54 0.81 # 54585 # 55067 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308 1_76 - 161 UPF0079 PF02367.12 123 0.0012 12.5 0.0 2 2 2.3e-05 0.005 10.5 0.0 12 50 56 94 46 105 0.82 # 54585 # 55067 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308 1_72 - 764 tRNA_anti-codon PF01336.20 75 8.8e-05 16.4 0.1 1 1 9.2e-07 0.0002 15.2 0.1 1 57 656 717 656 732 0.91 # 51202 # 53493 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.298 1_80 - 618 UvrD-helicase PF00580.16 315 1.1e-54 179.8 18.0 1 1 9.4e-57 2e-54 178.9 10.5 1 315 3 264 3 264 0.89 # 58802 # 60655 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 1_37 - 504 NACHT PF05729.7 166 0.00077 13.1 0.0 1 1 8.1e-06 0.0017 12.0 0.0 43 134 311 406 248 442 0.73 # 32728 # 34239 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.250 1_124 - 370 AAA_25 PF13481.1 194 4.2e-07 23.5 0.0 1 1 1.2e-08 1.3e-06 21.9 0.0 14 185 74 263 63 272 0.55 # 86506 # 87615 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.287 1_76 - 161 AAA_25 PF13481.1 194 0.00031 14.1 0.0 1 1 4.4e-06 0.00048 13.5 0.0 11 55 37 81 31 110 0.84 # 54585 # 55067 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308 1_159 - 57 ABC_tran_2 PF12848.2 85 0.00092 13.1 2.8 1 1 8.6e-06 0.0018 12.1 2.8 9 45 3 40 2 46 0.81 # 150066 # 150236 # -1 # ID=1_159;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.257 1_76 - 161 Rad51 PF08423.6 256 6.1e-09 29.1 0.0 1 1 4.6e-11 1e-08 28.4 0.0 13 91 34 112 22 120 0.92 # 54585 # 55067 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/80f35c00-98f2-463d-99de-8dcaa8059340 # Target file: checkm_output/bins/pGCA_000789395.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000789395.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/80f35c00-98f2-463d-99de-8dcaa8059340 checkm_output/bins/pGCA_000789395.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:42:23 2020 # [ok]