# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_139 - 1563 IstB_IS21 PF01695.12 178 0.00014 15.0 0.0 1 1 2e-06 0.00035 13.7 0.0 45 84 308 347 296 367 0.91 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_42 - 421 MipZ PF09140.6 261 8.1e-06 18.7 0.1 1 2 0.0001 0.018 7.8 0.1 2 28 116 142 115 161 0.85 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_42 - 421 MipZ PF09140.6 261 8.1e-06 18.7 0.1 2 2 6.3e-05 0.011 8.5 0.0 83 109 263 289 248 300 0.85 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_42 - 421 YhjQ PF06564.7 244 1.1e-05 18.5 0.1 1 3 0.00011 0.019 8.0 0.1 10 28 123 141 117 151 0.89 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_42 - 421 YhjQ PF06564.7 244 1.1e-05 18.5 0.1 2 3 0.043 7.5 -0.5 0.0 143 171 186 216 174 231 0.66 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_42 - 421 YhjQ PF06564.7 244 1.1e-05 18.5 0.1 3 3 0.00046 0.079 5.9 0.0 187 233 371 417 343 419 0.80 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_100 - 252 SSB PF00436.20 104 0.0014 12.2 0.0 1 1 2.4e-05 0.0041 10.7 0.0 27 87 122 182 113 194 0.84 # 99773 # 100528 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.636 1_88 - 694 AAA_22 PF13401.1 131 6.1e-08 26.6 0.0 1 1 4.6e-09 2e-07 24.9 0.0 5 113 328 428 324 442 0.68 # 88278 # 90359 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.721 1_139 - 1563 AAA_22 PF13401.1 131 8.9e-05 16.3 0.0 1 1 3.7e-05 0.0016 12.3 0.0 3 28 309 334 306 421 0.74 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_33 - 982 AAA_22 PF13401.1 131 0.00015 15.6 0.1 1 1 0.00046 0.02 8.7 0.1 3 37 316 392 314 512 0.42 # 32582 # 35527 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 1_80 - 1275 AAA_22 PF13401.1 131 0.0011 12.8 0.1 1 1 8.2e-05 0.0036 11.2 0.1 3 22 133 152 130 155 0.90 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_18 - 543 AAA_3 PF07726.6 131 0.00019 14.7 0.0 1 1 2.9e-06 0.0005 13.4 0.0 2 90 230 315 229 322 0.90 # 15856 # 17484 # 1 # ID=1_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.638 1_42 - 421 ArsA_ATPase PF02374.10 305 3e-05 16.8 0.0 1 2 3.4e-06 0.00059 12.6 0.0 2 28 116 142 115 202 0.90 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_42 - 421 ArsA_ATPase PF02374.10 305 3e-05 16.8 0.0 2 2 0.0057 0.98 2.0 0.0 123 136 273 288 228 292 0.78 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_33 - 982 PhoH PF02562.11 205 0.00028 13.8 0.1 1 1 4.1e-06 0.00071 12.5 0.0 18 66 316 364 301 374 0.89 # 32582 # 35527 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 1_80 - 1275 T2SE PF00437.15 272 0.00074 12.1 0.0 1 1 7.8e-06 0.0013 11.3 0.0 117 149 123 155 85 160 0.85 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_139 - 1563 Zeta_toxin PF06414.7 201 6.3e-05 15.8 0.2 1 1 1.5e-06 0.00027 13.8 0.1 13 39 307 333 297 343 0.81 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_131 - 589 SMC_N PF02463.14 220 0.0013 11.7 0.2 1 1 2.9e-05 0.005 9.7 0.1 32 61 38 67 35 76 0.86 # 138754 # 140520 # -1 # ID=1_131;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_80 - 1275 Arch_ATPase PF01637.13 234 2e-05 18.0 0.0 1 1 1.8e-07 3.1e-05 17.4 0.0 1 39 117 153 117 163 0.91 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_80 - 1275 AAA_16 PF13191.1 185 3.9e-09 30.4 0.2 1 2 6.8e-11 3.9e-09 30.4 0.2 2 51 117 162 116 194 0.86 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_80 - 1275 AAA_16 PF13191.1 185 3.9e-09 30.4 0.2 2 2 0.086 5 0.7 1.3 40 157 311 414 247 459 0.58 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_88 - 694 AAA_16 PF13191.1 185 5.5e-06 20.1 1.2 1 1 7.1e-07 4.1e-05 17.3 1.1 21 112 324 436 314 471 0.62 # 88278 # 90359 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.721 1_139 - 1563 AAA_16 PF13191.1 185 0.00093 12.9 26.4 1 4 0.01 0.6 3.7 0.0 43 91 130 181 124 251 0.81 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_139 - 1563 AAA_16 PF13191.1 185 0.00093 12.9 26.4 2 4 1.8e-06 0.0001 16.0 4.2 23 137 309 487 295 508 0.68 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_139 - 1563 AAA_16 PF13191.1 185 0.00093 12.9 26.4 3 4 0.036 2.1 1.9 0.0 30 81 516 564 511 614 0.82 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_139 - 1563 AAA_16 PF13191.1 185 0.00093 12.9 26.4 4 4 0.056 3.2 1.3 0.3 92 138 969 1031 907 1080 0.61 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_131 - 589 AAA_23 PF13476.1 202 1.5e-06 22.3 0.6 1 1 8.6e-08 1.5e-05 19.1 0.6 13 88 13 195 8 439 0.59 # 138754 # 140520 # -1 # ID=1_131;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_42 - 421 CbiA PF01656.18 195 5.9e-23 74.9 0.0 1 2 3.7e-10 6.4e-08 25.9 0.1 1 25 117 141 117 149 0.93 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_42 - 421 CbiA PF01656.18 195 5.9e-23 74.9 0.0 2 2 5e-16 8.7e-14 45.0 0.0 26 164 183 360 179 384 0.70 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_139 - 1563 KaiC PF06745.8 227 8.8e-05 15.4 0.0 1 1 2.8e-06 0.00024 13.9 0.0 16 57 307 347 272 364 0.84 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_88 - 694 KaiC PF06745.8 227 0.0015 11.3 0.1 1 1 4.1e-05 0.0036 10.1 0.1 15 38 323 346 310 358 0.86 # 88278 # 90359 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.721 1_18 - 543 AAA_14 PF13173.1 128 0.0016 12.0 0.1 1 1 2.4e-05 0.0042 10.7 0.1 4 39 229 260 226 333 0.73 # 15856 # 17484 # 1 # ID=1_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.638 1_60 - 68 CSD PF00313.17 66 1.3e-31 101.9 0.4 1 1 8.3e-34 1.4e-31 101.8 0.4 2 64 3 65 2 67 0.97 # 60674 # 60877 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.637 1_80 - 1275 AAA_29 PF13555.1 62 9.6e-05 15.6 0.0 1 1 2.1e-06 0.00036 13.7 0.0 21 42 132 153 125 156 0.82 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_88 - 694 AAA PF00004.24 132 8.7e-05 16.4 0.0 1 1 4.5e-06 0.00026 14.9 0.0 2 74 331 415 330 437 0.72 # 88278 # 90359 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.721 1_18 - 543 AAA PF00004.24 132 0.0001 16.2 0.1 1 1 3.7e-06 0.00021 15.2 0.1 1 113 230 375 230 392 0.64 # 15856 # 17484 # 1 # ID=1_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.638 1_139 - 1563 AAA PF00004.24 132 0.0004 14.3 0.0 1 1 2e-05 0.0012 12.8 0.0 1 70 313 390 313 406 0.69 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_80 - 1275 DUF258 PF03193.11 161 0.00019 14.3 0.0 1 1 2e-06 0.00035 13.4 0.0 24 54 122 153 114 173 0.86 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_42 - 421 AAA_31 PF13614.1 157 0.0006 13.5 0.0 1 2 0.0013 0.23 5.1 0.0 2 30 116 144 115 157 0.88 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_42 - 421 AAA_31 PF13614.1 157 0.0006 13.5 0.0 2 2 0.00078 0.14 5.8 0.0 106 129 267 290 215 298 0.89 # 44936 # 46198 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.651 1_7 - 455 DnaB_C PF03796.10 259 5.2e-74 242.0 0.0 1 1 3.8e-76 6.6e-74 241.7 0.0 4 257 191 446 188 448 0.94 # 6559 # 7923 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.710 1_139 - 1563 AAA_30 PF13604.1 196 1.4e-05 18.4 0.1 1 1 3.5e-07 6.1e-05 16.3 0.1 15 63 307 355 301 375 0.89 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_60 - 68 OB_RNB PF08206.6 58 1.8e-07 24.3 0.3 1 1 1.4e-09 2.4e-07 23.9 0.3 7 32 12 37 4 38 0.89 # 60674 # 60877 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.637 1_18 - 543 FtsK_SpoIIIE PF01580.13 205 2.4e-15 50.2 0.0 1 1 1.1e-16 6.6e-15 48.8 0.0 17 204 200 375 192 376 0.88 # 15856 # 17484 # 1 # ID=1_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.638 1_139 - 1563 FtsK_SpoIIIE PF01580.13 205 9.3e-05 15.6 0.2 1 1 1.1e-05 0.00065 12.9 0.1 37 64 308 336 284 358 0.75 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_80 - 1275 FtsK_SpoIIIE PF01580.13 205 0.00052 13.2 0.0 1 2 0.001 0.059 6.5 0.0 36 57 131 153 108 159 0.79 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_80 - 1275 FtsK_SpoIIIE PF01580.13 205 0.00052 13.2 0.0 2 2 0.0073 0.42 3.7 0.1 162 188 383 408 382 428 0.86 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_80 - 1275 ABC_tran PF00005.22 137 0.00071 13.6 0.0 1 1 8.3e-06 0.0014 12.6 0.0 11 30 134 153 129 161 0.87 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_88 - 694 AAA_19 PF13245.1 76 1.2e-07 25.1 1.5 1 1 1.1e-08 4.6e-07 23.3 1.5 12 62 329 377 322 405 0.80 # 88278 # 90359 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.721 1_139 - 1563 AAA_19 PF13245.1 76 6.3e-06 19.6 0.3 1 1 1.4e-07 6.3e-06 19.6 0.3 8 58 308 354 304 367 0.80 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_33 - 982 AAA_19 PF13245.1 76 7.9e-05 16.1 0.1 1 1 9e-06 0.00039 13.9 0.1 8 62 314 367 309 394 0.81 # 32582 # 35527 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 1_23 - 718 AAA_19 PF13245.1 76 0.0024 11.3 1.6 1 1 0.00059 0.025 8.1 0.0 11 35 54 76 45 96 0.76 # 21365 # 23518 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.679 1_23 - 718 AAA_10 PF12846.2 304 1e-37 123.9 0.0 1 1 3.1e-39 1.3e-37 123.5 0.0 2 303 52 340 51 341 0.89 # 21365 # 23518 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.679 1_18 - 543 AAA_10 PF12846.2 304 0.00017 14.8 1.7 1 2 0.0006 0.026 7.6 0.1 2 34 228 261 227 295 0.79 # 15856 # 17484 # 1 # ID=1_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.638 1_18 - 543 AAA_10 PF12846.2 304 0.00017 14.8 1.7 2 2 0.0018 0.08 6.0 0.1 211 252 313 356 287 376 0.81 # 15856 # 17484 # 1 # ID=1_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.638 1_139 - 1563 AAA_10 PF12846.2 304 0.0012 12.0 0.2 1 1 0.00017 0.0076 9.3 0.0 3 34 312 343 311 359 0.89 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_80 - 1275 AAA_10 PF12846.2 304 0.0012 12.0 0.0 1 1 4.9e-05 0.0021 11.1 0.0 2 20 135 153 134 228 0.88 # 77744 # 81568 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.724 1_33 - 982 ResIII PF04851.10 184 0.00054 13.5 0.0 1 1 3.5e-05 0.006 10.1 0.0 24 76 316 373 265 515 0.64 # 32582 # 35527 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 1_88 - 694 Zot PF05707.7 193 9.5e-05 15.6 0.0 1 1 3.6e-06 0.00063 12.9 0.0 1 91 328 411 328 429 0.73 # 88278 # 90359 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.721 1_88 - 694 Viral_helicase1 PF01443.13 234 0.00011 15.4 0.0 1 1 1.5e-06 0.00025 14.3 0.0 2 103 331 445 330 469 0.69 # 88278 # 90359 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.721 1_88 - 694 DUF2075 PF09848.4 352 2.7e-62 204.4 0.0 1 1 3.8e-64 3.3e-62 204.1 0.0 2 350 328 677 327 679 0.94 # 88278 # 90359 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.721 1_139 - 1563 DUF2075 PF09848.4 352 0.00017 14.3 0.0 1 1 6e-06 0.00052 12.7 0.0 4 33 313 340 310 374 0.76 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_33 - 982 DEAD PF00270.24 169 7.1e-11 35.6 0.0 1 2 1.4e-08 2.4e-06 20.8 0.0 14 99 317 403 302 432 0.69 # 32582 # 35527 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 1_33 - 982 DEAD PF00270.24 169 7.1e-11 35.6 0.0 2 2 5.5e-06 0.00095 12.4 0.0 118 166 471 517 446 519 0.78 # 32582 # 35527 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 1_139 - 1563 NACHT PF05729.7 166 2.8e-06 20.7 0.2 1 2 6.9e-07 0.00012 15.4 0.1 3 158 313 452 311 458 0.76 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_139 - 1563 NACHT PF05729.7 166 2.8e-06 20.7 0.2 2 2 0.016 2.8 1.2 0.0 5 27 515 537 512 544 0.85 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_7 - 455 AAA_25 PF13481.1 194 1.8e-12 40.7 0.1 1 1 7.5e-14 3.2e-12 39.9 0.1 29 190 202 369 188 373 0.86 # 6559 # 7923 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.710 1_139 - 1563 AAA_25 PF13481.1 194 7.5e-05 15.9 4.7 1 1 2.9e-06 0.00013 15.1 0.1 34 82 311 362 273 416 0.80 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_127 - 1123 AAA_25 PF13481.1 194 0.00061 12.9 0.1 1 1 4.4e-05 0.0019 11.3 0.1 23 111 216 297 202 322 0.75 # 132144 # 135512 # -1 # ID=1_127;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.718 1_88 - 694 AAA_25 PF13481.1 194 0.00092 12.3 0.8 1 1 8.1e-05 0.0035 10.4 0.8 33 155 327 444 311 469 0.63 # 88278 # 90359 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.721 1_139 - 1563 AAA_28 PF13521.1 163 0.0048 10.5 3.2 1 2 0.0026 0.44 4.2 0.0 2 21 313 332 312 347 0.79 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_139 - 1563 AAA_28 PF13521.1 163 0.0048 10.5 3.2 2 2 0.00084 0.14 5.7 0.2 71 156 1062 1152 1028 1159 0.70 # 144942 # 149630 # -1 # ID=1_139;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/1c40dd52-773a-42ee-b92f-27fe3c85252d # Target file: checkm_output/bins/pGCA_000761215.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000761215.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/1c40dd52-773a-42ee-b92f-27fe3c85252d checkm_output/bins/pGCA_000761215.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:42:15 2020 # [ok]