# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_10 - 324 NmrA PF05368.8 233 4.2e-06 17.4 0.6 1 1 3.2e-07 1e-05 16.1 0.6 1 52 152 205 152 264 0.90 # 7014 # 7985 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_10 - 324 ADH_zinc_N PF00107.21 130 1.5e-17 54.6 0.0 1 1 1.1e-18 3.4e-17 53.5 0.0 1 114 160 267 160 285 0.91 # 7014 # 7985 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_16 - 346 AAA_14 PF13173.1 128 0.0085 7.3 7.0 1 1 1.8e-05 0.00055 11.1 1.1 19 90 146 224 143 266 0.67 # 12472 # 13509 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.271 1_10 - 324 NAD_binding_10 PF13460.1 183 6.1e-06 17.6 0.1 1 1 2.8e-07 8.8e-06 17.1 0.1 1 38 152 192 152 222 0.86 # 7014 # 7985 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_10 - 324 Epimerase PF01370.16 236 9.5e-05 13.1 0.1 1 1 4.1e-06 0.00013 12.7 0.1 1 39 152 191 152 247 0.82 # 7014 # 7985 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_10 - 324 DapB_N PF01113.15 124 3.2e-06 18.3 0.2 1 2 0.042 1.3 0.2 0.0 92 103 121 132 115 142 0.84 # 7014 # 7985 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_10 - 324 DapB_N PF01113.15 124 3.2e-06 18.3 0.2 2 2 1.1e-06 3.4e-05 15.1 0.2 3 97 152 242 150 250 0.78 # 7014 # 7985 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5594c8b8-d02f-4ffe-9691-2b8eecb0766d # Target file: checkm_output/bins/pGCA_000597965.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000597965.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5594c8b8-d02f-4ffe-9691-2b8eecb0766d checkm_output/bins/pGCA_000597965.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:41:44 2020 # [ok]