# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_39 - 598 IstB_IS21 PF01695.12 178 2.5e-06 19.0 0.0 1 2 1.1e-06 5.6e-05 14.6 0.0 46 85 32 71 27 92 0.86 # 32302 # 34095 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_39 - 598 IstB_IS21 PF01695.12 178 2.5e-06 19.0 0.0 2 2 0.013 0.68 1.3 0.0 98 140 110 160 98 187 0.71 # 32302 # 34095 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_13 - 640 AIG1 PF04548.11 212 0.00014 13.0 0.0 1 1 6.6e-06 0.00034 11.7 0.0 32 62 51 81 43 108 0.84 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_31 - 141 SSB PF00436.20 104 2.2e-28 90.2 0.1 1 1 5.3e-30 2.7e-28 89.9 0.1 1 102 1 102 1 104 0.98 # 26054 # 26476 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 DUF87 PF01935.12 229 4.9e-05 15.2 0.0 1 1 1.7e-06 9.1e-05 14.3 0.0 27 48 164 185 142 193 0.84 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 Septin PF00735.13 281 3.8e-05 14.7 0.0 1 1 2.4e-06 6.2e-05 14.0 0.0 6 29 162 185 158 209 0.80 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_13 - 640 Septin PF00735.13 281 0.00014 12.9 0.1 1 1 9.7e-06 0.00025 12.0 0.1 7 77 6 82 3 91 0.68 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_23 - 336 AAA_22 PF13401.1 131 9.3e-06 17.8 0.0 1 1 3.9e-07 2e-05 16.7 0.0 4 41 160 208 156 259 0.71 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 ATP_bind_1 PF03029.12 238 0.00012 13.6 0.0 1 1 3.8e-06 0.0002 12.9 0.0 1 23 165 187 165 193 0.87 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 AAA_17 PF13207.1 121 4.6e-06 19.5 0.1 1 1 2.3e-07 1.2e-05 18.1 0.1 2 49 163 207 162 302 0.82 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_47 - 94 AAA_21 PF13304.1 303 0.0025 9.7 10.7 1 1 5.6e-05 0.0029 9.5 10.7 80 162 6 88 2 92 0.93 # 37656 # 37937 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.202 1_13 - 640 Miro PF08477.8 119 9e-06 18.2 0.0 1 1 4.4e-07 2.3e-05 16.9 0.0 9 119 13 131 5 131 0.75 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_23 - 336 MobB PF03205.9 140 2.2e-05 16.2 0.4 1 2 2.3e-06 0.00012 13.8 0.0 3 27 163 187 161 199 0.81 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 MobB PF03205.9 140 2.2e-05 16.2 0.4 2 2 0.065 3.4 -0.6 0.1 20 44 296 320 293 322 0.81 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_52 - 1736 Helicase_C PF00271.26 78 1.1e-07 23.7 0.3 1 2 0.049 2.5 0.1 0.0 14 40 882 908 868 910 0.84 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_52 - 1736 Helicase_C PF00271.26 78 1.1e-07 23.7 0.3 2 2 3.7e-08 1.9e-06 19.7 0.0 12 78 1319 1387 1312 1387 0.86 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_23 - 336 T2SE PF00437.15 272 6.5e-64 207.3 0.0 1 1 1.5e-65 7.6e-64 207.1 0.0 6 269 14 312 9 315 0.95 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 Zeta_toxin PF06414.7 201 6.7e-05 14.0 0.0 1 1 2.1e-06 0.00011 13.3 0.0 17 49 161 194 147 218 0.85 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 AAA_16 PF13191.1 185 2.7e-05 16.2 0.0 1 1 7e-07 3.7e-05 15.8 0.0 24 81 160 234 147 306 0.76 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 AAA_23 PF13476.1 202 0.00096 11.5 5.1 1 1 9.6e-06 0.0005 12.4 2.1 22 37 163 178 141 185 0.89 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 AAA_18 PF13238.1 129 6.8e-05 15.2 0.1 1 1 5e-06 0.00026 13.3 0.0 1 18 163 180 163 227 0.76 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_3 - 187 CbiA PF01656.18 195 1.9e-08 25.9 0.1 1 2 6.4e-07 3.3e-05 15.3 0.0 1 24 3 26 3 32 0.92 # 884 # 1444 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_3 - 187 CbiA PF01656.18 195 1.9e-08 25.9 0.1 2 2 5.1e-05 0.0027 9.1 0.0 95 178 54 131 29 151 0.68 # 884 # 1444 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_39 - 598 KaiC PF06745.8 227 2.1e-05 15.7 0.0 1 2 1.9e-06 9.9e-05 13.5 0.0 16 71 30 84 23 214 0.85 # 32302 # 34095 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_39 - 598 KaiC PF06745.8 227 2.1e-05 15.7 0.0 2 2 0.086 4.4 -1.7 0.0 133 156 329 352 322 358 0.85 # 32302 # 34095 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_23 - 336 AAA_14 PF13173.1 128 9.2e-06 17.6 0.1 1 2 0.028 1.5 0.8 0.0 70 102 35 66 11 74 0.85 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 AAA_14 PF13173.1 128 9.2e-06 17.6 0.1 2 2 2.3e-06 0.00012 14.0 0.0 2 54 160 211 159 254 0.75 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 GvpD PF07088.6 484 0.00026 11.3 0.0 1 1 6.5e-06 0.00034 10.9 0.0 8 42 158 192 150 258 0.83 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_13 - 640 TIGR03594 TIGR03594 432 3e-08 24.7 0.3 1 3 0.044 2.3 -1.3 0.0 176 211 4 42 2 50 0.74 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_13 - 640 TIGR03594 TIGR03594 432 3e-08 24.7 0.3 2 3 2e-08 1e-06 19.6 0.1 31 123 51 135 47 154 0.87 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_13 - 640 TIGR03594 TIGR03594 432 3e-08 24.7 0.3 3 3 0.006 0.31 1.5 0.0 304 347 196 239 187 265 0.79 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_23 - 336 AAA_29 PF13555.1 62 2.1e-05 16.0 0.0 1 1 9.3e-07 4.9e-05 14.9 0.0 22 40 159 177 140 184 0.81 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_39 - 598 AAA PF00004.24 132 5.6e-05 15.4 0.2 1 2 2.5e-05 0.0013 10.9 0.0 2 105 37 166 36 177 0.66 # 32302 # 34095 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_39 - 598 AAA PF00004.24 132 5.6e-05 15.4 0.2 2 2 0.025 1.3 1.2 0.0 47 74 411 434 377 459 0.70 # 32302 # 34095 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_23 - 336 Sigma54_activat PF00158.21 168 7.6e-05 14.2 0.0 1 1 3.2e-06 0.00017 13.1 0.0 14 43 152 181 143 198 0.84 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_13 - 640 MMR_HSR1 PF01926.18 116 2.2e-08 26.1 0.1 1 1 8.6e-10 4.5e-08 25.1 0.1 4 116 8 129 5 129 0.68 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_22 - 604 TraG-D_C PF12696.2 128 1.4e-27 88.1 0.0 1 1 1.1e-28 5.5e-27 86.2 0.0 2 127 406 528 405 529 0.88 # 18097 # 19908 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_23 - 336 NTPase_1 PF03266.10 168 0.00035 12.3 0.1 1 1 1.4e-05 0.0007 11.3 0.1 1 23 162 184 162 192 0.88 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_39 - 598 DnaB_C PF03796.10 259 2.7e-06 18.4 0.0 1 2 2.1e-07 1.1e-05 16.3 0.0 13 117 27 136 23 156 0.79 # 32302 # 34095 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_39 - 598 DnaB_C PF03796.10 259 2.7e-06 18.4 0.0 2 2 0.011 0.58 0.9 0.0 129 185 119 177 101 179 0.77 # 32302 # 34095 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_52 - 1736 Methyltransf_26 PF13659.1 117 2.4e-13 42.2 0.0 1 1 1.5e-14 7.8e-13 40.5 0.0 3 116 115 225 113 226 0.84 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_23 - 336 AAA_30 PF13604.1 196 0.00073 11.1 0.0 1 1 2.2e-05 0.0011 10.5 0.0 12 44 155 186 146 193 0.72 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 FtsK_SpoIIIE PF01580.13 205 5.8e-08 24.4 0.0 1 1 1.9e-09 9.8e-08 23.7 0.0 36 59 154 181 134 187 0.77 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_52 - 1736 MTS PF05175.9 170 1.7e-05 16.2 0.0 1 1 9.7e-07 5e-05 14.7 0.0 31 142 112 226 105 246 0.76 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_9 - 175 VirE PF05272.6 198 0.00016 13.1 0.1 1 1 4.5e-06 0.00023 12.6 0.1 45 117 31 105 6 107 0.82 # 4034 # 4558 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.478 1_23 - 336 ABC_tran PF00005.22 137 2.2e-07 23.3 0.0 1 1 8.3e-09 4.3e-07 22.3 0.0 5 50 154 200 152 226 0.84 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_52 - 1736 Eco57I PF07669.6 106 6.7e-09 28.1 1.8 1 1 5.9e-10 3.1e-08 26.0 0.3 3 104 175 276 173 278 0.84 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_34 - 923 AAA_10 PF12846.2 304 4.2e-38 123.4 1.5 1 2 0.092 1.6 -0.0 0.0 126 161 221 283 153 335 0.76 # 27626 # 30394 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.288 1_34 - 923 AAA_10 PF12846.2 304 4.2e-38 123.4 1.5 2 2 7.4e-39 1.3e-37 121.8 0.4 2 301 546 843 545 845 0.83 # 27626 # 30394 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.288 1_23 - 336 AAA_10 PF12846.2 304 2.6e-06 19.0 0.0 1 1 1.8e-07 3.1e-06 18.7 0.0 2 37 161 196 160 333 0.74 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_22 - 604 AAA_10 PF12846.2 304 9.7e-05 13.8 0.0 1 1 9.6e-06 0.00017 13.1 0.0 32 302 154 490 127 491 0.75 # 18097 # 19908 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_52 - 1736 ResIII PF04851.10 184 2.4e-10 32.5 9.8 1 1 9.3e-12 2.4e-10 32.5 9.8 2 161 803 999 802 1046 0.57 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_23 - 336 ResIII PF04851.10 184 3.8e-05 15.6 0.0 1 1 2.8e-06 7.3e-05 14.6 0.0 3 64 145 201 143 237 0.72 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_13 - 640 GTP_EFTU_D2 PF03144.20 74 1.4e-09 30.0 0.0 1 1 5.6e-11 2.9e-09 29.0 0.0 3 60 265 316 263 323 0.90 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_52 - 1736 DEAD PF00270.24 169 8.4e-09 27.1 0.7 1 2 5.3e-08 1.4e-06 19.9 0.1 2 107 807 913 806 1047 0.78 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_52 - 1736 DEAD PF00270.24 169 8.4e-09 27.1 0.7 2 2 0.065 1.7 0.1 0.0 120 150 1689 1721 1647 1730 0.70 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_23 - 336 DEAD PF00270.24 169 2.9e-06 18.9 0.0 1 1 1.9e-07 4.9e-06 18.1 0.0 2 69 148 212 147 243 0.71 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_22 - 604 TrwB_AAD_bind PF10412.4 386 1.4e-20 65.1 0.0 1 2 2.5e-06 6.5e-05 13.6 0.0 39 150 147 270 124 297 0.71 # 18097 # 19908 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_22 - 604 TrwB_AAD_bind PF10412.4 386 1.4e-20 65.1 0.0 2 2 3e-17 7.7e-16 49.6 0.0 185 380 345 542 306 544 0.84 # 18097 # 19908 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_23 - 336 TrwB_AAD_bind PF10412.4 386 0.0001 13.0 0.0 1 1 6.1e-06 0.00016 12.3 0.0 16 42 161 187 154 217 0.85 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_22 - 604 T4SS-DNA_transf PF02534.9 469 2.4e-106 348.0 0.1 1 1 6.4e-108 3.3e-106 347.5 0.1 3 460 94 563 82 571 0.88 # 18097 # 19908 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_13 - 640 GTP_EFTU PF00009.22 188 1.1e-59 193.0 0.4 1 1 3.2e-61 1.7e-59 192.4 0.4 2 185 2 237 1 240 0.92 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_23 - 336 RNA_helicase PF00910.17 107 0.00013 14.1 0.0 1 1 6e-06 0.00031 12.9 0.0 1 23 163 185 163 224 0.79 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 UPF0079 PF02367.12 123 1.7e-05 16.5 0.0 1 1 6e-07 3.1e-05 15.6 0.0 8 42 153 187 147 205 0.85 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_13 - 640 EFG_IV PF03764.13 120 6.6e-26 82.3 0.0 1 1 3.5e-27 1.8e-25 80.8 0.0 1 120 416 532 416 532 0.98 # 8496 # 10415 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_23 - 336 AAA_24 PF13479.1 213 0.00012 13.7 0.0 1 1 5e-06 0.00026 12.6 0.0 5 33 162 188 159 217 0.84 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_23 - 336 NACHT PF05729.7 166 1.8e-05 16.4 0.0 1 1 6e-07 3.1e-05 15.6 0.0 3 22 163 182 161 188 0.89 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_39 - 598 AAA_25 PF13481.1 194 6.2e-22 69.9 0.0 1 1 4.5e-23 1.2e-21 69.0 0.0 30 193 30 175 20 176 0.90 # 32302 # 34095 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_23 - 336 AAA_25 PF13481.1 194 0.00014 13.3 0.0 1 1 8.2e-06 0.00021 12.7 0.0 29 56 157 183 130 200 0.76 # 19909 # 20916 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333 1_52 - 1736 SNF2_N PF00176.18 299 3.3e-21 67.2 5.1 1 3 1.5e-22 7.5e-21 66.1 0.4 24 204 818 1078 758 1139 0.76 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_52 - 1736 SNF2_N PF00176.18 299 3.3e-21 67.2 5.1 2 3 0.0085 0.44 1.2 0.1 194 286 1265 1361 1248 1370 0.73 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 1_52 - 1736 SNF2_N PF00176.18 299 3.3e-21 67.2 5.1 3 3 0.037 1.9 -0.9 0.1 123 151 1676 1705 1638 1728 0.70 # 41672 # 46879 # -1 # ID=1_52;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/33499fa0-2d13-46be-aeac-b4adb3d8300a # Target file: checkm_output/bins/pGCA_000466075.2.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000466075.2.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/33499fa0-2d13-46be-aeac-b4adb3d8300a checkm_output/bins/pGCA_000466075.2.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:41:23 2020 # [ok]