# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_5 - 245 Methyltransf_8 PF05148.10 219 7.8e-06 18.4 0.1 1 1 1.6e-07 1.4e-05 17.5 0.1 105 155 89 140 32 194 0.78 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_5 - 245 Methyltransf_12 PF08242.7 99 9.9e-17 54.1 0.0 1 1 1.7e-18 1.5e-16 53.5 0.0 1 99 47 139 47 139 0.81 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_5 - 245 Pox_MCEL PF03291.11 332 2.7e-05 15.8 0.3 1 1 2.5e-05 0.0023 9.5 0.2 56 104 35 83 31 173 0.70 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 IstB_IS21 PF01695.12 178 2.9e-06 19.5 0.2 1 2 6.9e-06 0.00061 12.0 0.1 47 75 24 53 18 75 0.83 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 IstB_IS21 PF01695.12 178 2.9e-06 19.5 0.2 2 2 0.00061 0.054 5.6 0.0 98 148 135 185 119 193 0.79 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 3_4 - 397 MipZ PF09140.6 261 1.4e-07 23.6 1.4 1 1 9.7e-08 4.3e-06 18.7 0.1 2 41 3 42 2 175 0.57 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 5_3 - 480 MipZ PF09140.6 261 5e-05 15.2 0.0 1 1 2.3e-06 0.0001 14.1 0.0 11 112 239 344 233 357 0.79 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 3_4 - 397 YhjQ PF06564.7 244 4.7e-08 25.4 0.0 1 1 1.1e-09 9.5e-08 24.4 0.0 1 144 1 150 1 159 0.77 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 2_17 - 469 3HCDH_N PF02737.13 180 9.1e-05 14.9 0.0 1 1 1.8e-06 0.00016 14.1 0.0 1 42 4 45 4 80 0.88 # 12059 # 13465 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 4_5 - 245 Methyltransf_18 PF12847.2 112 1.1e-20 67.0 0.0 1 1 1.8e-22 1.6e-20 66.6 0.0 1 110 42 142 42 144 0.93 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 480 DUF87 PF01935.12 229 6.2e-07 22.1 0.1 1 1 7e-09 6.2e-07 22.1 0.1 23 60 229 265 220 267 0.93 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_10 - 232 NB-ARC PF00931.17 287 0.00026 12.6 0.3 1 1 5.9e-06 0.00052 11.6 0.3 20 45 25 50 18 60 0.87 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 MetW PF07021.7 193 9.8e-05 14.5 0.0 1 1 1.6e-06 0.00014 14.0 0.0 8 101 35 132 29 165 0.72 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 AAA_22 PF13401.1 131 4e-05 16.5 0.5 1 1 2.7e-06 0.00012 15.0 0.2 9 28 29 48 23 154 0.84 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 5_3 - 480 AAA_22 PF13401.1 131 0.00014 14.8 0.4 1 1 1.4e-05 0.00062 12.7 0.4 5 103 230 347 226 381 0.62 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_5 - 245 Methyltransf_11 PF08241.7 95 1.4e-27 88.9 0.0 1 1 2.3e-29 2e-27 88.3 0.0 1 95 47 141 47 141 0.99 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 AAA_15 PF13175.1 415 3.7e-09 28.8 0.9 1 2 2.1e-05 0.0019 10.0 0.5 18 43 19 60 3 128 0.61 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 AAA_15 PF13175.1 415 3.7e-09 28.8 0.9 2 2 9.8e-08 8.8e-06 17.7 0.2 321 410 109 185 68 186 0.75 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 9_1 - 165 AAA_17 PF13207.1 121 2.4e-06 21.1 0.9 1 1 2.7e-07 3.5e-06 20.6 0.9 23 113 3 101 2 153 0.84 # 3 # 497 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.341 1_22 - 121 AAA_17 PF13207.1 121 3.3e-06 20.7 1.3 1 1 3.1e-07 4e-06 20.4 1.3 23 110 24 119 17 121 0.84 # 18602 # 18964 # 1 # ID=1_22;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.342 3_11 - 121 AAA_17 PF13207.1 121 3.3e-06 20.7 1.3 1 1 3.1e-07 4e-06 20.4 1.3 23 110 24 119 17 121 0.84 # 10538 # 10900 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 4_11 - 121 AAA_17 PF13207.1 121 8.1e-06 19.4 0.9 1 1 7.7e-07 9.8e-06 19.2 0.9 23 110 24 119 17 121 0.84 # 7940 # 8302 # 1 # ID=4_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 2_3 - 225 AAA_17 PF13207.1 121 2.3e-05 18.0 1.4 1 1 3.5e-06 4.4e-05 17.1 1.3 23 113 24 122 21 152 0.82 # 621 # 1295 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.330 4_10 - 232 AAA_17 PF13207.1 121 0.00015 15.3 1.3 1 1 2.2e-05 0.00028 14.5 1.2 1 17 26 42 26 125 0.85 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 2_12 - 225 AAA_17 PF13207.1 121 0.00045 13.8 1.3 1 1 5.7e-05 0.00072 13.1 1.3 23 112 24 121 19 181 0.78 # 8051 # 8725 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 4_10 - 232 AAA_21 PF13304.1 303 5.1e-19 62.0 0.0 1 1 5.2e-18 2.3e-16 53.3 0.0 3 297 28 185 26 187 0.81 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 5_4 - 149 AAA_21 PF13304.1 303 0.00075 12.2 4.9 1 1 2e-05 0.0009 11.9 4.9 33 124 29 118 4 125 0.82 # 3318 # 3764 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.273 4_10 - 232 Miro PF08477.8 119 3.5e-06 20.3 0.0 1 1 7.5e-08 6.7e-06 19.4 0.0 2 65 27 92 26 104 0.71 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 MobB PF03205.9 140 1e-05 18.0 0.1 1 1 2.3e-07 2e-05 17.1 0.1 2 36 26 60 25 67 0.86 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 3_4 - 397 ArsA_ATPase PF02374.10 305 4.6e-16 51.4 0.9 1 1 6.6e-18 5.9e-16 51.0 0.0 3 136 3 133 1 137 0.90 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 4_10 - 232 PhoH PF02562.11 205 0.00024 13.1 0.0 1 2 8.2e-06 0.00073 11.5 0.0 17 48 22 54 15 84 0.75 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 PhoH PF02562.11 205 0.00024 13.1 0.0 2 2 0.098 8.7 -1.8 0.0 63 90 112 139 103 156 0.72 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 5_3 - 480 T2SE PF00437.15 272 0.00057 11.5 0.0 1 1 1.2e-05 0.0011 10.7 0.0 127 151 228 252 199 265 0.82 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_5 - 245 CMAS PF02353.15 273 4e-11 35.2 0.1 1 1 6.8e-13 6.1e-11 34.6 0.1 62 164 42 141 32 205 0.83 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 2_17 - 469 F420_oxidored PF03807.12 96 0.00029 14.0 0.0 1 1 9.3e-06 0.00083 12.6 0.0 1 47 4 46 4 101 0.75 # 12059 # 13465 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 4_10 - 232 SMC_N PF02463.14 220 1e-05 17.6 0.5 1 1 6.2e-07 5.5e-05 15.2 0.5 25 211 25 199 8 205 0.71 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 3_4 - 397 VirC1 PF07015.6 231 2e-08 26.3 0.0 1 2 9.9e-08 8.8e-06 17.6 0.0 1 46 1 46 1 70 0.89 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 3_4 - 397 VirC1 PF07015.6 231 2e-08 26.3 0.0 2 2 0.00027 0.024 6.4 0.0 72 108 112 149 93 166 0.80 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 3_4 - 397 Fer4_NifH PF00142.13 273 5.6e-08 25.0 0.5 1 2 4.1e-08 3.6e-06 19.0 0.0 8 72 10 77 3 85 0.84 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 3_4 - 397 Fer4_NifH PF00142.13 273 5.6e-08 25.0 0.5 2 2 0.0018 0.16 3.8 0.1 157 234 168 247 160 283 0.78 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 4_10 - 232 AAA_16 PF13191.1 185 4.6e-05 16.2 0.1 1 1 9.3e-07 8.3e-05 15.4 0.1 24 45 24 45 16 58 0.89 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 AAA_23 PF13476.1 202 1.4e-05 18.2 2.7 1 1 7.6e-07 3.4e-05 17.0 2.7 11 40 15 45 3 179 0.86 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 5_3 - 480 AAA_23 PF13476.1 202 0.061 6.3 9.7 1 1 0.0002 0.0087 9.1 3.1 12 118 221 329 197 469 0.66 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_10 - 232 AAA_18 PF13238.1 129 0.00026 14.0 1.0 1 1 1.3e-05 0.0006 12.9 1.0 1 40 27 85 27 215 0.73 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 3_4 - 397 AAA_18 PF13238.1 129 0.0031 10.6 5.8 1 1 8.2e-05 0.0036 10.4 0.3 8 87 12 138 11 150 0.63 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 3_4 - 397 CbiA PF01656.18 195 5.2e-28 90.5 0.7 1 1 1.7e-29 7.7e-28 89.9 0.0 1 178 4 218 4 234 0.70 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 5_3 - 480 CbiA PF01656.18 195 0.00018 13.7 0.0 1 1 8e-06 0.00036 12.7 0.0 3 35 233 265 231 367 0.67 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_5 - 245 Methyltransf_25 PF13649.1 101 3.3e-15 49.1 0.0 1 1 5.5e-17 4.9e-15 48.5 0.0 1 101 46 137 46 137 0.88 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 AAA_14 PF13173.1 128 0.0007 12.3 1.1 1 1 0.00018 0.0079 8.9 1.1 3 26 25 48 23 225 0.89 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 5_3 - 480 AAA_14 PF13173.1 128 0.003 10.2 7.0 1 1 5.1e-05 0.0023 10.6 0.6 4 43 231 281 228 393 0.60 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_5 - 245 DREV PF05219.7 265 1.5e-05 16.7 0.0 1 1 2.3e-07 2.1e-05 16.2 0.0 90 196 38 151 30 197 0.79 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 3_10 - 46 CSD PF00313.17 66 2.3e-21 68.2 1.1 1 1 2.8e-23 2.5e-21 68.1 1.1 2 45 3 45 2 45 0.97 # 10076 # 10213 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.348 4_10 - 232 AAA_29 PF13555.1 62 2.4e-05 16.6 0.1 1 1 5.5e-07 4.9e-05 15.6 0.1 17 42 19 43 12 46 0.81 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 5_3 - 480 AAA PF00004.24 132 5e-05 16.3 0.1 1 1 1.8e-05 0.00079 12.4 0.1 1 89 232 361 232 379 0.76 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_10 - 232 AAA PF00004.24 132 5.7e-05 16.1 0.7 1 1 5.1e-06 0.00023 14.2 0.7 3 22 29 48 27 184 0.78 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 Ubie_methyltran PF01209.13 233 1e-16 53.5 0.0 1 1 1.7e-18 1.5e-16 52.9 0.0 40 151 35 141 13 185 0.86 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_5 - 245 PCMT PF01135.14 210 4.3e-06 19.1 0.0 1 1 9.3e-08 8.2e-06 18.2 0.0 41 174 4 144 1 161 0.63 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 MMR_HSR1 PF01926.18 116 8.4e-05 15.3 0.5 1 1 2.7e-06 0.00024 13.8 0.5 2 56 27 86 26 220 0.62 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 NNMT_PNMT_TEMT PF01234.12 256 0.00021 13.0 0.0 1 2 0.0059 0.52 1.9 0.0 46 86 34 72 3 82 0.68 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_5 - 245 NNMT_PNMT_TEMT PF01234.12 256 0.00021 13.0 0.0 2 2 4.2e-05 0.0038 8.9 0.0 158 198 106 142 88 151 0.85 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 DUF258 PF03193.11 161 4.4e-06 18.7 0.0 1 1 8.9e-08 7.9e-06 17.9 0.0 31 69 19 58 4 75 0.80 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 2_17 - 469 NAD_binding_2 PF03446.10 163 8.8e-49 158.2 0.0 1 1 1.5e-50 1.4e-48 157.6 0.0 2 163 3 174 2 174 0.97 # 12059 # 13465 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 3_4 - 397 AAA_31 PF13614.1 157 1.3e-08 27.7 0.7 1 1 1.1e-09 9.4e-08 24.9 0.7 2 131 3 137 2 159 0.63 # 3345 # 4535 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.257 4_10 - 232 NTPase_1 PF03266.10 168 0.00067 12.1 1.4 1 2 4.7e-05 0.0042 9.5 0.2 2 22 27 47 26 67 0.82 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 NTPase_1 PF03266.10 168 0.00067 12.1 1.4 2 2 0.012 1.1 1.7 0.0 85 145 139 197 101 216 0.71 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 AAA_33 PF13671.1 143 2.2e-05 17.1 0.1 1 1 5.2e-07 4.7e-05 16.0 0.1 1 33 26 80 26 201 0.64 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 Methyltransf_26 PF13659.1 117 4.2e-15 48.6 0.0 1 1 6.6e-17 5.9e-15 48.1 0.0 1 115 43 143 43 145 0.93 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 2_17 - 469 NAD_Gly3P_dh_N PF01210.18 157 0.0001 14.8 0.0 1 1 4.1e-06 0.00037 13.0 0.0 2 47 5 50 4 65 0.78 # 12059 # 13465 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_17 - 469 2-Hacid_dh_C PF02826.14 178 7.1e-05 14.7 0.0 1 1 2.6e-06 0.00023 13.1 0.0 37 127 3 100 1 130 0.74 # 12059 # 13465 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 4_5 - 245 FmrO PF07091.6 251 5.2e-05 15.0 0.0 1 1 8.1e-07 7.2e-05 14.6 0.0 107 176 44 111 32 134 0.80 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 AAA_30 PF13604.1 196 0.00055 12.3 0.1 1 1 1.5e-05 0.0013 11.0 0.0 18 49 24 55 18 76 0.80 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 3_10 - 46 OB_RNB PF08206.6 58 1.7e-05 17.1 0.2 1 1 2.2e-07 1.9e-05 16.9 0.2 7 25 12 29 4 34 0.83 # 10076 # 10213 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.348 2_17 - 469 ApbA PF02558.11 151 3e-06 19.5 0.0 1 1 1.2e-07 1.1e-05 17.7 0.0 1 96 5 95 5 103 0.82 # 12059 # 13465 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 4_5 - 245 TehB PF03848.9 192 9.1e-07 20.9 0.0 1 1 1.2e-08 1.1e-06 20.7 0.0 31 131 43 140 8 195 0.79 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 480 FtsK_SpoIIIE PF01580.13 205 6.1e-18 57.7 0.0 1 1 1.2e-19 1.1e-17 56.9 0.0 27 201 218 380 207 384 0.88 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_5 - 245 MTS PF05175.9 170 6.5e-13 41.1 0.0 1 1 1.2e-14 1e-12 40.5 0.0 23 140 34 143 30 151 0.87 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 Dynamin_N PF00350.18 168 0.00065 12.3 0.4 1 1 5.3e-05 0.0047 9.5 0.4 1 134 27 183 27 206 0.56 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 Methyltrans_SAM PF10672.4 286 0.00013 13.5 0.0 1 2 0.00036 0.032 5.8 0.0 123 162 42 81 34 102 0.79 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_5 - 245 Methyltrans_SAM PF10672.4 286 0.00013 13.5 0.0 2 2 0.00036 0.032 5.7 0.0 210 245 115 150 106 167 0.88 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 ABC_tran PF00005.22 137 4.2e-33 107.3 0.0 1 1 7e-35 6.2e-33 106.8 0.0 2 136 15 155 14 156 0.87 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 TIGR03263 TIGR03263 180 0.00059 11.9 0.1 1 1 1.6e-05 0.0015 10.6 0.1 5 23 28 46 24 67 0.74 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 Methyltransf_9 PF08003.6 315 5.3e-13 41.0 0.0 1 1 9e-15 8e-13 40.4 0.0 103 217 30 141 27 151 0.85 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 480 DAP3 PF10236.4 309 5.9e-05 14.8 0.0 1 1 1e-06 9.1e-05 14.2 0.0 21 106 227 310 206 349 0.84 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_10 - 232 AAA_19 PF13245.1 76 9.9e-05 14.8 0.1 1 1 2.2e-06 0.0002 13.9 0.1 12 31 26 44 19 68 0.83 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 2_18 - 487 G6PD_N PF00479.17 183 3.1e-59 193.0 0.4 1 1 3.5e-61 3.1e-59 193.0 0.4 1 183 10 186 10 186 0.97 # 13529 # 14989 # 1 # ID=2_18;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.266 5_3 - 480 AAA_10 PF12846.2 304 2.6e-09 29.6 1.0 1 2 8e-10 3.6e-08 25.9 0.1 2 38 230 266 229 276 0.95 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 5_3 - 480 AAA_10 PF12846.2 304 2.6e-09 29.6 1.0 2 2 0.014 0.63 2.1 0.1 224 294 334 411 314 422 0.79 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_10 - 232 AAA_10 PF12846.2 304 0.0002 13.6 0.0 1 1 6.2e-06 0.00028 13.1 0.0 6 38 29 61 26 159 0.78 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 NodS PF05401.6 201 1.8e-06 20.2 0.0 1 1 3.1e-08 2.7e-06 19.6 0.0 46 145 45 142 32 150 0.85 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 480 ResIII PF04851.10 184 3.4e-09 29.5 0.3 1 1 8.1e-11 7.2e-09 28.4 0.3 22 154 207 338 174 350 0.78 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_5 - 245 Methyltransf_31 PF13847.1 152 1.2e-22 72.9 0.0 1 1 1.7e-24 1.5e-22 72.5 0.0 3 111 42 144 40 194 0.89 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_5 - 245 FtsJ PF01728.14 181 1.8e-05 17.5 0.0 1 1 3.2e-07 2.9e-05 16.9 0.0 23 72 42 87 18 197 0.74 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 PduV-EutP PF10662.4 143 0.00017 13.9 0.0 1 1 3.2e-06 0.00029 13.1 0.0 6 24 29 47 25 84 0.86 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 PrmA PF06325.8 295 3.9e-11 35.3 0.0 1 1 6.8e-13 6e-11 34.7 0.0 161 257 42 141 27 142 0.90 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 480 DUF853 PF05872.7 504 0.00026 12.1 0.0 1 1 5.5e-06 0.00049 11.2 0.0 22 64 230 272 216 286 0.88 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 5_3 - 480 TrwB_AAD_bind PF10412.4 386 1e-06 20.3 0.1 1 2 4.5e-08 4e-06 18.3 0.0 13 52 227 266 222 276 0.91 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 5_3 - 480 TrwB_AAD_bind PF10412.4 386 1e-06 20.3 0.1 2 2 0.039 3.5 -1.2 0.0 260 282 360 382 329 436 0.82 # 1865 # 3304 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 4_10 - 232 AAA_11 PF13086.1 236 0.00046 12.5 0.0 1 1 1.1e-05 0.00097 11.5 0.0 16 115 23 121 11 191 0.60 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 Guanylate_kin PF00625.16 183 0.00054 12.2 0.1 1 1 9.4e-06 0.00084 11.5 0.1 6 101 28 120 23 196 0.61 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 Methyltransf_23 PF13489.1 161 1.7e-22 72.6 0.0 1 1 2.7e-24 2.4e-22 72.1 0.0 12 134 33 161 25 175 0.82 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 UPF0079 PF02367.12 123 0.00013 14.4 0.0 1 1 3e-06 0.00027 13.4 0.0 12 37 21 46 13 65 0.83 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 2_17 - 469 IlvN PF07991.7 165 0.00041 12.5 0.1 1 1 2.5e-05 0.0022 10.1 0.0 5 48 3 46 1 61 0.84 # 12059 # 13465 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 4_6 - 290 Lambda_tail_I PF06805.7 82 0.00046 12.8 0.0 1 1 1.4e-05 0.0013 11.4 0.0 18 74 151 201 140 207 0.82 # 4198 # 5067 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 4_10 - 232 AAA_25 PF13481.1 194 6.8e-05 15.1 0.0 1 1 1.8e-06 0.00016 13.8 0.0 32 55 23 46 9 68 0.79 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 TPMT PF05724.6 218 0.00018 13.7 0.0 1 1 6e-06 0.00053 12.2 0.0 36 86 41 91 31 154 0.82 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 AAA_28 PF13521.1 163 0.00075 12.2 0.0 1 1 1.7e-05 0.0015 11.2 0.0 4 18 29 43 26 83 0.84 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_5 - 245 Methyltransf_4 PF02390.12 197 9.5e-06 17.5 0.1 1 2 1.5e-06 0.00013 13.8 0.0 18 58 41 80 11 101 0.84 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_5 - 245 Methyltransf_4 PF02390.12 197 9.5e-06 17.5 0.1 2 2 0.0085 0.76 1.5 0.1 115 138 123 146 120 209 0.78 # 3483 # 4217 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.382 4_10 - 232 AAA_5 PF07728.9 139 3.7e-05 16.2 0.0 1 3 1.1e-05 0.00099 11.6 0.0 4 21 29 46 27 85 0.80 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 AAA_5 PF07728.9 139 3.7e-05 16.2 0.0 2 3 0.073 6.5 -0.8 0.0 40 73 120 153 103 156 0.81 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 4_10 - 232 AAA_5 PF07728.9 139 3.7e-05 16.2 0.0 3 3 0.022 1.9 0.9 0.0 69 89 185 205 157 217 0.77 # 7229 # 7924 # -1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.336 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/9eade3dd-0681-4667-ba8c-0ec6270ee0ab # Target file: checkm_output/bins/pGCA_000332735.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000332735.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9eade3dd-0681-4667-ba8c-0ec6270ee0ab checkm_output/bins/pGCA_000332735.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:55 2020 # [ok]