# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 985 IstB_IS21 PF01695.12 178 1.6e-05 17.1 0.1 1 1 4.2e-07 3.8e-05 15.9 0.1 46 125 510 595 482 604 0.66 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 3_6 - 562 3HCDH_N PF02737.13 180 0.0023 10.3 6.3 1 2 0.0025 0.23 3.9 2.5 1 30 100 129 100 133 0.93 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 3HCDH_N PF02737.13 180 0.0023 10.3 6.3 2 2 0.00015 0.014 7.8 0.1 2 36 273 307 272 359 0.75 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 GIDA PF01134.17 392 8e-07 20.9 1.7 1 4 8.8e-09 8e-07 20.9 1.7 1 52 100 153 100 168 0.88 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 GIDA PF01134.17 392 8e-07 20.9 1.7 2 4 0.067 6.1 -1.7 0.0 96 190 189 283 177 295 0.70 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 GIDA PF01134.17 392 8e-07 20.9 1.7 3 4 0.08 7.3 -2.0 0.0 3 32 274 303 272 325 0.84 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 GIDA PF01134.17 392 8e-07 20.9 1.7 4 4 0.0068 0.61 1.5 0.3 349 385 390 426 381 430 0.78 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_3 - 985 UvrD_C_2 PF13538.1 104 9.7e-15 47.4 0.1 1 1 4.8e-16 4.4e-14 45.3 0.1 2 100 814 911 813 915 0.83 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 3_6 - 562 Pyr_redox_2 PF07992.9 201 5e-42 136.8 0.0 1 1 1.3e-43 1.1e-41 135.6 0.0 1 199 100 407 100 409 0.96 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_11 - 284 Usp PF00582.21 140 1.1e-35 115.6 0.4 1 2 4.7e-19 4.3e-17 55.4 0.2 3 140 2 157 1 157 0.91 # 8840 # 9691 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.593 3_11 - 284 Usp PF00582.21 140 1.1e-35 115.6 0.4 2 2 2.7e-19 2.4e-17 56.2 0.0 65 140 208 283 163 283 0.78 # 8840 # 9691 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.593 1_4 - 513 DUF87 PF01935.12 229 3.2e-10 32.9 0.0 1 1 5.9e-12 5.4e-10 32.2 0.0 11 77 115 177 102 231 0.80 # 3731 # 5269 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 5_1 - 300 AAA_22 PF13401.1 131 3.5e-17 55.6 0.0 1 1 7.5e-19 6.8e-17 54.6 0.0 7 126 64 190 59 194 0.94 # 77 # 976 # -1 # ID=5_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.653 3_6 - 562 DFP PF04127.10 185 0.0039 9.6 2.9 1 2 0.00047 0.043 6.2 0.6 28 51 106 129 101 153 0.84 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 DFP PF04127.10 185 0.0039 9.6 2.9 2 2 0.0043 0.39 3.0 0.1 32 53 282 303 277 340 0.74 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 5_4 - 363 DNA_methylase PF00145.12 335 1.1e-05 17.4 0.0 1 1 2.1e-07 1.9e-05 16.6 0.0 30 110 115 211 101 218 0.82 # 3134 # 4222 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.642 3_6 - 562 NAD_binding_7 PF13241.1 103 7.1e-07 22.3 1.4 1 2 6.2e-05 0.0057 9.7 0.1 9 38 100 129 97 164 0.90 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 NAD_binding_7 PF13241.1 103 7.1e-07 22.3 1.4 2 2 2.6e-05 0.0024 11.0 0.1 8 45 271 323 264 386 0.66 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_7 - 235 ArsA_ATPase PF02374.10 305 0.00043 12.1 0.0 1 2 0.08 7.3 -1.8 0.0 10 19 10 19 5 22 0.86 # 6453 # 7157 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_7 - 235 ArsA_ATPase PF02374.10 305 0.00043 12.1 0.0 2 2 1.3e-05 0.0012 10.7 0.0 205 253 95 144 47 167 0.74 # 6453 # 7157 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_3 - 985 PhoH PF02562.11 205 2.8e-09 29.2 1.1 1 2 4.2e-06 0.00038 12.5 0.1 7 39 498 531 493 545 0.76 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 1_3 - 985 PhoH PF02562.11 205 2.8e-09 29.2 1.1 2 2 8.4e-07 7.6e-05 14.8 0.1 119 161 578 621 563 647 0.85 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 3_6 - 562 NAD_binding_8 PF13450.1 68 3.5e-05 16.6 4.8 1 2 6.9e-07 6.3e-05 15.8 1.2 1 35 103 136 103 155 0.91 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 NAD_binding_8 PF13450.1 68 3.5e-05 16.6 4.8 2 2 0.049 4.4 0.3 0.1 1 25 275 299 275 304 0.80 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 F420_oxidored PF03807.12 96 0.0068 9.7 5.5 1 3 0.0019 0.17 5.2 1.1 2 33 101 128 100 132 0.87 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 F420_oxidored PF03807.12 96 0.0068 9.7 5.5 2 3 0.0052 0.47 3.8 0.1 1 35 272 302 272 345 0.85 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 F420_oxidored PF03807.12 96 0.0068 9.7 5.5 3 3 0.07 6.4 0.1 0.0 21 52 349 381 341 388 0.79 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 5_1 - 300 AAA_16 PF13191.1 185 1.4e-05 17.9 0.0 1 2 8.2e-06 0.00074 12.3 0.0 8 52 45 94 43 147 0.69 # 77 # 976 # -1 # ID=5_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.653 5_1 - 300 AAA_16 PF13191.1 185 1.4e-05 17.9 0.0 2 2 0.0041 0.38 3.5 0.0 139 183 134 184 114 186 0.72 # 77 # 976 # -1 # ID=5_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.653 1_4 - 513 AAA_23 PF13476.1 202 0.00048 13.2 0.0 1 1 1e-05 0.00092 12.3 0.0 24 53 129 158 123 278 0.65 # 3731 # 5269 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_7 - 235 CbiA PF01656.18 195 2e-06 20.1 0.6 1 2 7.3e-05 0.0033 9.6 0.0 2 20 4 22 4 23 0.91 # 6453 # 7157 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_7 - 235 CbiA PF01656.18 195 2e-06 20.1 0.6 2 2 0.00019 0.0084 8.3 0.1 120 167 99 146 35 183 0.77 # 6453 # 7157 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_4 - 513 CbiA PF01656.18 195 0.00018 13.7 0.0 1 1 6.7e-06 0.0003 13.0 0.0 4 50 129 180 127 286 0.75 # 3731 # 5269 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_6 - 562 HI0933_like PF03486.9 409 5.8e-09 27.6 5.3 1 2 9.7e-07 8.9e-05 13.8 2.9 2 33 100 131 99 139 0.91 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 HI0933_like PF03486.9 409 5.8e-09 27.6 5.3 2 2 1e-06 9.5e-05 13.7 0.0 82 164 285 363 281 383 0.86 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 FAD_binding_2 PF00890.19 417 4.6e-06 18.4 5.5 1 3 5e-08 4.6e-06 18.4 5.5 2 32 101 131 100 138 0.91 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 FAD_binding_2 PF00890.19 417 4.6e-06 18.4 5.5 2 3 0.034 3.1 -0.8 0.6 142 204 311 366 295 395 0.63 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 FAD_binding_2 PF00890.19 417 4.6e-06 18.4 5.5 3 3 0.0028 0.25 2.8 0.2 374 402 375 405 369 419 0.85 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 Pyr_redox_3 PF13738.1 203 9.7e-19 61.0 0.1 1 3 3.1e-06 0.00028 13.7 0.1 167 199 98 130 70 144 0.84 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 Pyr_redox_3 PF13738.1 203 9.7e-19 61.0 0.1 2 3 2.2e-09 2e-07 24.0 0.0 115 201 219 304 172 306 0.80 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 Pyr_redox_3 PF13738.1 203 9.7e-19 61.0 0.1 3 3 5.4e-08 4.9e-06 19.5 0.0 89 155 317 378 309 428 0.84 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 5_1 - 300 TniB PF05621.6 302 7.8e-201 657.9 4.7 1 1 9.9e-203 9e-201 657.7 4.7 1 287 1 287 1 297 0.98 # 77 # 976 # -1 # ID=5_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.653 1_4 - 513 TraG-D_C PF12696.2 128 1.7e-22 72.4 0.0 1 1 3.3e-24 3e-22 71.6 0.0 2 127 350 472 349 473 0.85 # 3731 # 5269 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_6 - 562 XdhC_C PF13478.1 136 0.00035 13.7 0.8 1 1 1.3e-05 0.0012 12.0 0.1 1 66 273 351 273 370 0.64 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_3 - 985 AAA_30 PF13604.1 196 2.4e-52 170.1 5.1 1 1 6.7e-54 6.1e-52 168.8 5.1 2 190 495 675 494 681 0.96 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 1_4 - 513 FtsK_SpoIIIE PF01580.13 205 1.3e-05 17.6 0.0 1 1 2.7e-07 2.4e-05 16.6 0.0 39 80 119 162 96 170 0.80 # 3731 # 5269 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_6 - 562 K_oxygenase PF13434.1 341 3.7e-06 18.8 0.4 1 3 0.0064 0.58 1.7 0.3 189 223 97 129 86 132 0.76 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 K_oxygenase PF13434.1 341 3.7e-06 18.8 0.4 2 3 2.4e-06 0.00022 13.0 0.0 130 231 217 309 199 335 0.80 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 K_oxygenase PF13434.1 341 3.7e-06 18.8 0.4 3 3 0.023 2.1 -0.2 0.0 139 160 345 366 317 377 0.63 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_4 - 513 AAA_10 PF12846.2 304 2.5e-11 36.3 0.0 1 1 5.8e-11 5.3e-09 28.6 0.0 3 289 126 416 124 432 0.66 # 3731 # 5269 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_6 - 562 FAD_oxidored PF12831.2 428 2.1e-06 19.7 4.0 1 2 2.3e-08 2.1e-06 19.7 4.0 2 41 101 139 100 159 0.83 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 FAD_oxidored PF12831.2 428 2.1e-06 19.7 4.0 2 2 0.014 1.3 0.7 0.0 85 120 306 341 265 364 0.73 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 DAO PF01266.19 358 1.7e-10 33.0 12.1 1 3 4.6e-08 4.2e-06 18.6 1.4 2 35 101 134 100 161 0.85 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 DAO PF01266.19 358 1.7e-10 33.0 12.1 2 3 0.039 3.5 -0.9 0.1 3 31 274 302 272 306 0.74 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 DAO PF01266.19 358 1.7e-10 33.0 12.1 3 3 1.4e-08 1.3e-06 20.3 0.7 152 238 315 399 308 456 0.73 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_3 - 985 Viral_helicase1 PF01443.13 234 1.3e-16 53.5 0.3 1 2 1e-09 9.1e-08 24.6 0.0 3 115 516 631 514 691 0.76 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 1_3 - 985 Viral_helicase1 PF01443.13 234 1.3e-16 53.5 0.3 2 2 2.8e-10 2.5e-08 26.4 0.1 157 234 845 916 789 916 0.65 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 3_6 - 562 Pyr_redox PF00070.22 80 2e-20 65.8 5.3 1 2 2.2e-06 0.0002 14.6 1.2 2 31 101 130 100 132 0.95 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 Pyr_redox PF00070.22 80 2e-20 65.8 5.3 2 2 3.5e-18 3.2e-16 52.4 0.2 1 72 272 342 272 351 0.91 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_4 - 513 TrwB_AAD_bind PF10412.4 386 6.8e-134 439.0 0.0 1 1 8.8e-136 8e-134 438.8 0.0 1 385 110 491 110 492 0.98 # 3731 # 5269 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_4 - 513 T4SS-DNA_transf PF02534.9 469 1.5e-14 46.2 0.0 1 2 4.9e-06 0.00044 11.6 0.0 44 176 124 246 93 279 0.75 # 3731 # 5269 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_4 - 513 T4SS-DNA_transf PF02534.9 469 1.5e-14 46.2 0.0 2 2 2.2e-12 2e-10 32.5 0.0 264 429 312 476 297 488 0.77 # 3731 # 5269 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 5_1 - 300 AAA_32 PF13654.1 509 0.00019 12.9 0.1 1 2 7.1e-06 0.00065 11.1 0.0 8 81 34 112 26 124 0.86 # 77 # 976 # -1 # ID=5_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.653 5_1 - 300 AAA_32 PF13654.1 509 0.00019 12.9 0.1 2 2 0.038 3.5 -1.2 0.1 472 500 255 283 244 291 0.85 # 77 # 976 # -1 # ID=5_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.653 1_3 - 985 PIF1 PF05970.9 364 0.00025 12.8 0.7 1 1 1.8e-05 0.0017 10.1 0.5 2 65 495 556 494 665 0.83 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 3_6 - 562 AlaDh_PNT_C PF01262.16 168 9.7e-07 21.2 4.6 1 2 1.5e-06 0.00014 14.2 1.3 3 50 81 128 79 131 0.91 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 3_6 - 562 AlaDh_PNT_C PF01262.16 168 9.7e-07 21.2 4.6 2 2 0.00014 0.013 7.8 0.1 19 60 269 310 260 341 0.84 # 3707 # 5392 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_3 - 985 Herpes_Helicase PF02689.9 819 4.1e-06 17.5 0.1 1 2 0.0021 0.19 2.0 0.0 173 208 556 591 541 599 0.77 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 1_3 - 985 Herpes_Helicase PF02689.9 819 4.1e-06 17.5 0.1 2 2 9.3e-07 8.5e-05 13.2 0.0 742 786 870 915 846 923 0.83 # 776 # 3730 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.619 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3980eb48-7c6e-49d2-8d68-b3b715318f32 # Target file: checkm_output/bins/pGCA_000325725.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000325725.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3980eb48-7c6e-49d2-8d68-b3b715318f32 checkm_output/bins/pGCA_000325725.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:54 2020 # [ok]