# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_17 - 166 TIGR00329 TIGR00329 305 6.7e-05 13.3 0.0 1 1 2.4e-06 8.6e-05 13.0 0.0 125 195 14 95 10 110 0.83 # 12680 # 13177 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.313 1_24 - 111 Terminase_GpA PF05876.7 557 0.00034 10.4 0.1 1 1 1.1e-05 0.00039 10.2 0.1 179 211 12 44 4 61 0.82 # 16852 # 17184 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=TAAA;rbs_spacer=9bp;gc_cont=0.300 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/ca87e2eb-2155-4f4a-a312-37712a23fe04 # Target file: checkm_output/bins/pGCA_000284635.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000284635.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ca87e2eb-2155-4f4a-a312-37712a23fe04 checkm_output/bins/pGCA_000284635.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:39 2020 # [ok]