# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_64 - 358 Mg_chelatase PF01078.16 207 1.1e-06 20.4 0.0 1 2 3.8e-08 2.9e-06 19.1 0.0 13 56 179 222 168 265 0.81 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_64 - 358 Mg_chelatase PF01078.16 207 1.1e-06 20.4 0.0 2 2 0.058 4.5 -1.1 0.0 22 43 234 255 222 290 0.73 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_31 - 548 Seryl_tRNA_N PF02403.17 108 0.0029 10.2 7.0 1 1 7.8e-05 0.006 9.2 7.0 10 100 429 521 421 526 0.90 # 15367 # 17010 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.586 1_64 - 358 IstB_IS21 PF01695.12 178 3.1e-06 19.2 0.0 1 1 1.4e-07 5.2e-06 18.5 0.0 44 70 185 211 145 245 0.71 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_72 - 266 IstB_IS21 PF01695.12 178 0.0003 12.7 0.0 1 1 1.4e-05 0.00052 12.0 0.0 38 75 11 48 4 51 0.88 # 49962 # 50759 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 1_26 - 236 MipZ PF09140.6 261 2e-08 26.1 0.2 1 2 3.2e-06 0.00025 12.7 0.0 2 39 3 39 2 45 0.87 # 12590 # 13297 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 1_26 - 236 MipZ PF09140.6 261 2e-08 26.1 0.2 2 2 1.1e-05 0.00088 10.9 0.2 83 135 62 114 50 230 0.93 # 12590 # 13297 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 1_71 - 159 SSB PF00436.20 104 2.5e-40 129.1 0.6 1 1 4.2e-42 3.3e-40 128.8 0.6 1 99 4 102 4 110 0.97 # 49188 # 49664 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_46 - 788 DUF87 PF01935.12 229 3.5e-05 16.2 0.0 1 1 1.2e-06 9.2e-05 14.8 0.0 20 45 404 429 400 440 0.87 # 22253 # 24616 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.469 1_64 - 358 AAA_22 PF13401.1 131 4e-06 19.6 0.0 1 1 3.2e-07 8.1e-06 18.6 0.0 3 45 187 223 185 256 0.74 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_54 - 509 AAA_22 PF13401.1 131 9e-05 15.2 0.0 1 1 9.3e-06 0.00024 13.8 0.0 3 31 241 269 237 341 0.83 # 31033 # 32559 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_46 - 788 AAA_22 PF13401.1 131 0.00058 12.6 0.0 1 1 7.2e-05 0.0019 10.9 0.0 4 20 407 423 404 450 0.88 # 22253 # 24616 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.469 1_64 - 358 ATP_bind_1 PF03029.12 238 4.9e-05 15.5 0.0 1 1 1.1e-06 8.5e-05 14.7 0.0 1 28 193 219 193 261 0.73 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_64 - 358 AAA_17 PF13207.1 121 2.6e-07 24.0 0.1 1 1 9.2e-09 7.1e-07 22.7 0.1 2 22 191 211 190 236 0.84 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_64 - 358 AAA_21 PF13304.1 303 0.0007 12.1 0.0 1 1 1.5e-05 0.0012 11.4 0.0 3 46 192 214 191 250 0.72 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_26 - 236 ArsA_ATPase PF02374.10 305 1.7e-07 23.0 0.1 1 1 7.1e-09 2.7e-07 22.4 0.1 3 48 4 48 2 79 0.81 # 12590 # 13297 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 1_72 - 266 ArsA_ATPase PF02374.10 305 0.00017 13.2 0.0 1 1 7.3e-06 0.00028 12.5 0.0 5 40 24 59 20 67 0.78 # 49962 # 50759 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 1_64 - 358 T2SE PF00437.15 272 1.9e-45 147.3 0.0 1 1 9.8e-47 2.5e-45 147.0 0.0 7 269 35 334 30 337 0.95 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_54 - 509 T2SE PF00437.15 272 9.8e-40 128.6 0.0 1 1 5.5e-41 1.4e-39 128.1 0.0 10 269 115 381 108 384 0.85 # 31033 # 32559 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_57 - 327 T2SE PF00437.15 272 9.1e-17 53.3 0.0 1 1 5e-18 1.3e-16 52.8 0.0 91 246 87 242 65 268 0.77 # 34264 # 35244 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.523 1_64 - 358 Zeta_toxin PF06414.7 201 3.2e-05 15.6 0.0 1 1 1.3e-06 5.1e-05 15.0 0.0 13 50 185 223 175 246 0.87 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_26 - 236 Zeta_toxin PF06414.7 201 0.00033 12.3 0.0 1 1 1.8e-05 0.00069 11.3 0.0 16 51 2 38 1 44 0.93 # 12590 # 13297 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 1_26 - 236 VirC1 PF07015.6 231 3.6e-19 61.2 0.0 1 1 8e-21 6.2e-19 60.5 0.0 1 187 1 188 1 222 0.84 # 12590 # 13297 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 1_64 - 358 AAA_16 PF13191.1 185 0.00016 14.2 0.0 1 1 8.7e-06 0.00034 13.2 0.0 25 57 189 220 166 240 0.79 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_54 - 509 AAA_16 PF13191.1 185 0.00033 13.2 0.0 1 1 1.4e-05 0.00055 12.5 0.0 8 105 230 338 227 405 0.68 # 31033 # 32559 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_64 - 358 AAA_23 PF13476.1 202 0.002 11.0 1.6 1 1 3.8e-05 0.0029 10.4 1.4 18 39 186 208 166 212 0.77 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_64 - 358 AAA_18 PF13238.1 129 2.4e-06 20.5 0.0 1 1 1.4e-07 5.3e-06 19.3 0.0 1 23 191 215 191 241 0.74 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_54 - 509 AAA_18 PF13238.1 129 0.00021 14.1 0.0 1 1 1.2e-05 0.00046 13.1 0.0 1 66 245 311 245 330 0.78 # 31033 # 32559 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_26 - 236 CbiA PF01656.18 195 9.4e-18 56.8 0.0 1 1 3.6e-19 1.4e-17 56.3 0.0 1 142 4 125 4 182 0.83 # 12590 # 13297 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 1_72 - 266 CbiA PF01656.18 195 2.3e-08 26.2 0.0 1 1 1.3e-09 5e-08 25.1 0.0 5 45 26 66 24 175 0.71 # 49962 # 50759 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 1_64 - 358 GvpD PF07088.6 484 0.00061 10.7 0.0 1 1 1.4e-05 0.0011 9.8 0.0 2 38 178 216 177 224 0.79 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_54 - 509 AAA_29 PF13555.1 62 4.2e-05 15.6 0.2 1 2 9.7e-06 0.00038 12.6 0.1 21 40 241 259 231 273 0.75 # 31033 # 32559 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_54 - 509 AAA_29 PF13555.1 62 4.2e-05 15.6 0.2 2 2 0.076 2.9 0.1 0.0 36 57 324 348 300 352 0.63 # 31033 # 32559 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_64 - 358 AAA_29 PF13555.1 62 9.9e-05 14.4 0.0 1 1 6.6e-06 0.00025 13.1 0.0 9 47 177 212 157 226 0.78 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_64 - 358 AAA PF00004.24 132 9.8e-05 15.1 0.0 1 1 3e-06 0.00023 13.9 0.0 1 22 191 212 191 229 0.78 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_46 - 788 Sigma54_activat PF00158.21 168 5.3e-05 15.3 0.0 1 1 2.7e-06 0.0001 14.3 0.0 23 81 408 469 396 473 0.90 # 22253 # 24616 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.469 1_64 - 358 Sigma54_activat PF00158.21 168 0.00012 14.1 0.0 1 1 1e-05 0.00038 12.5 0.0 17 55 183 220 172 231 0.81 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_68 - 514 TraG-D_C PF12696.2 128 7e-26 83.1 0.0 1 1 1.7e-27 1.3e-25 82.2 0.0 1 127 305 426 305 427 0.89 # 44999 # 46540 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.521 1_26 - 236 AAA_31 PF13614.1 157 3e-11 36.0 0.0 1 2 5.4e-12 4.2e-10 32.3 0.0 2 46 3 46 2 76 0.87 # 12590 # 13297 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 1_26 - 236 AAA_31 PF13614.1 157 3e-11 36.0 0.0 2 2 0.011 0.87 2.0 0.0 117 152 77 111 49 116 0.73 # 12590 # 13297 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 1_64 - 358 AAA_33 PF13671.1 143 3.8e-05 16.1 0.0 1 1 2.2e-06 0.00017 14.0 0.0 2 20 191 209 191 235 0.85 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_64 - 358 KTI12 PF08433.5 270 4.1e-05 15.4 0.0 1 1 8.6e-07 6.6e-05 14.7 0.0 4 33 191 220 190 237 0.83 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_64 - 358 AAA_30 PF13604.1 196 0.00024 13.2 0.0 1 1 6.8e-06 0.00052 12.1 0.0 4 48 174 218 171 226 0.82 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_64 - 358 FtsK_SpoIIIE PF01580.13 205 5.9e-06 18.4 0.0 1 1 2.6e-07 1e-05 17.6 0.0 35 59 185 209 152 212 0.76 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_54 - 509 FtsK_SpoIIIE PF01580.13 205 0.00012 14.1 0.0 1 1 9.6e-06 0.00037 12.5 0.0 40 62 244 266 224 271 0.79 # 31033 # 32559 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_64 - 358 ABC_tran PF00005.22 137 9.1e-05 15.3 0.0 1 1 2e-06 0.00016 14.6 0.0 5 45 182 222 180 254 0.86 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_72 - 266 DUF2791 PF10923.3 417 0.00078 10.6 0.0 1 1 1.6e-05 0.0012 10.0 0.0 55 87 26 58 21 74 0.82 # 49962 # 50759 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 1_64 - 358 AAA_19 PF13245.1 76 5.1e-06 18.8 0.4 1 1 1.7e-07 1.3e-05 17.5 0.0 8 35 186 212 180 253 0.82 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_46 - 788 AAA_10 PF12846.2 304 7.2e-19 60.8 0.0 1 1 4.8e-20 1.9e-18 59.4 0.0 2 293 408 692 407 700 0.85 # 22253 # 24616 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.469 1_64 - 358 AAA_10 PF12846.2 304 3.5e-05 15.9 0.0 1 1 1.8e-06 7e-05 14.9 0.0 3 24 190 211 188 222 0.84 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_34 - 78 FAD_oxidored PF12831.2 428 2.2e-05 16.2 0.1 1 1 2.8e-07 2.2e-05 16.2 0.1 134 171 38 74 4 77 0.72 # 17767 # 18000 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_54 - 509 Viral_helicase1 PF01443.13 234 0.00023 13.2 0.0 1 1 6.5e-06 0.0005 12.1 0.0 4 41 248 288 245 318 0.78 # 31033 # 32559 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_68 - 514 TrwB_AAD_bind PF10412.4 386 1.3e-17 56.0 0.0 1 2 0.00062 0.024 5.7 0.0 68 127 94 157 36 170 0.72 # 44999 # 46540 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.521 1_68 - 514 TrwB_AAD_bind PF10412.4 386 1.3e-17 56.0 0.0 2 2 7.6e-17 2.9e-15 48.2 0.0 243 383 304 443 247 446 0.85 # 44999 # 46540 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.521 1_54 - 509 TrwB_AAD_bind PF10412.4 386 0.0013 9.9 0.7 1 1 6.2e-05 0.0024 9.0 0.2 17 38 244 265 230 274 0.82 # 31033 # 32559 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_64 - 358 Sigma54_activ_2 PF14532.1 138 9.6e-05 15.0 0.0 1 1 2.7e-06 0.00021 13.9 0.0 15 49 182 216 177 258 0.85 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_68 - 514 T4SS-DNA_transf PF02534.9 469 1.6e-79 260.1 0.0 1 1 2.9e-81 2.2e-79 259.6 0.0 34 456 23 462 7 469 0.86 # 44999 # 46540 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.521 1_64 - 358 Pox_A32 PF04665.7 241 0.00014 13.7 0.0 1 1 4.2e-06 0.00032 12.5 0.0 11 68 186 240 178 257 0.77 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_76 - 1402 TrkA_N PF02254.13 116 8.9e-06 18.3 0.0 1 2 0.00027 0.02 7.4 0.0 41 101 62 115 46 130 0.75 # 52447 # 56652 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.515 1_76 - 1402 TrkA_N PF02254.13 116 8.9e-06 18.3 0.0 2 2 0.00021 0.016 7.8 0.0 50 107 1100 1157 1097 1162 0.94 # 52447 # 56652 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.515 1_64 - 358 AAA_24 PF13479.1 213 3.6e-05 15.9 0.0 1 1 9.8e-07 7.6e-05 14.9 0.0 2 23 187 208 186 222 0.89 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_40 - 172 TIGR00922 TIGR00922 172 7.7e-08 24.6 0.0 1 1 1.2e-09 9e-08 24.4 0.0 32 101 26 97 8 136 0.77 # 20206 # 20721 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_64 - 358 NACHT PF05729.7 166 0.00015 14.0 0.0 1 1 3.7e-06 0.00028 13.1 0.0 3 23 191 211 189 217 0.88 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_57 - 327 AAA_25 PF13481.1 194 0.0013 10.7 1.7 1 1 3e-05 0.0023 9.9 1.3 34 58 120 144 106 247 0.76 # 34264 # 35244 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.523 1_64 - 358 AAA_28 PF13521.1 163 1.2e-05 17.8 0.0 1 1 3.9e-07 3e-05 16.6 0.0 1 22 190 211 190 229 0.76 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_64 - 358 AAA_5 PF07728.9 139 0.00032 13.0 0.0 1 1 1e-05 0.00078 11.7 0.0 1 33 190 222 190 267 0.86 # 40552 # 41625 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d94179d5-7e9a-4e8a-8fb5-4b8582d4716e # Target file: checkm_output/bins/pGCA_000262325.2.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000262325.2.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d94179d5-7e9a-4e8a-8fb5-4b8582d4716e checkm_output/bins/pGCA_000262325.2.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:35 2020 # [ok]