# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 128 UDPG_MGDP_dh_N PF03721.9 185 3.1e-05 13.3 0.2 1 1 2.9e-06 3.5e-05 13.2 0.2 28 67 21 57 12 99 0.82 # 1793 # 2176 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=10bp;gc_cont=0.315 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/f6b97de8-e6f2-4eba-9299-1bb213223b0c # Target file: checkm_output/bins/pGCA_000259255.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000259255.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f6b97de8-e6f2-4eba-9299-1bb213223b0c checkm_output/bins/pGCA_000259255.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:31 2020 # [ok]