# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 548 UPF0079 PF02367.12 123 1.8e-05 13.1 0.3 1 2 0.017 0.083 1.3 0.0 70 100 247 277 238 292 0.78 # 2279 # 3922 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.359 1_3 - 548 UPF0079 PF02367.12 123 1.8e-05 13.1 0.3 2 2 6.6e-05 0.00033 9.0 0.2 58 111 321 376 313 385 0.78 # 2279 # 3922 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.359 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/7f82e1a1-1942-48ba-aade-10ff6a440847 # Target file: checkm_output/bins/pGCA_000255955.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000255955.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7f82e1a1-1942-48ba-aade-10ff6a440847 checkm_output/bins/pGCA_000255955.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:29 2020 # [ok]