# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_23 - 176 Thymidylate_kin PF02223.12 186 0.00048 12.4 2.4 1 2 0.001 0.096 4.9 0.1 7 34 12 40 8 68 0.78 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 Thymidylate_kin PF02223.12 186 0.00048 12.4 2.4 2 2 0.00017 0.016 7.4 0.5 117 163 83 127 70 147 0.63 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 IstB_IS21 PF01695.12 178 1.4e-05 17.4 0.0 1 1 3.1e-07 3e-05 16.3 0.0 49 122 3 77 1 85 0.91 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_57 - 329 NmrA PF05368.8 233 1e-09 30.8 0.0 1 1 5.7e-11 1.8e-09 30.0 0.0 1 104 7 126 7 136 0.89 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_53 - 306 NmrA PF05368.8 233 2e-07 23.3 0.3 1 1 1.7e-08 5.5e-07 21.9 0.3 2 219 4 246 3 262 0.75 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_56 - 275 NmrA PF05368.8 233 0.00072 11.7 0.0 1 1 4.6e-05 0.0015 10.6 0.0 1 39 3 42 3 59 0.89 # 56815 # 57639 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 1_23 - 176 AAA_22 PF13401.1 131 0.00013 15.0 0.0 1 1 3.3e-06 0.00032 13.7 0.0 7 37 4 43 2 171 0.63 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 PRK PF00485.13 194 0.00043 12.7 0.0 1 1 8.5e-06 0.00081 11.8 0.0 2 59 4 58 3 67 0.84 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_34 - 435 SRP54 PF00448.17 196 0.00035 12.9 0.0 1 2 0.00072 0.069 5.4 0.0 18 66 70 118 65 148 0.84 # 38182 # 39486 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.330 1_34 - 435 SRP54 PF00448.17 196 0.00035 12.9 0.0 2 2 0.001 0.098 4.9 0.0 93 135 266 308 230 314 0.83 # 38182 # 39486 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.330 1_23 - 176 AAA_17 PF13207.1 121 1e-18 61.2 0.1 1 1 1.6e-20 1.5e-18 60.6 0.1 1 110 3 105 3 136 0.84 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 Miro PF08477.8 119 5.2e-05 16.6 0.1 1 1 1e-06 9.7e-05 15.7 0.0 1 26 3 41 3 115 0.66 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_57 - 329 Semialdhyde_dh PF01118.19 121 0.00032 13.9 0.0 1 1 9.8e-06 0.00095 12.4 0.0 2 46 7 50 6 87 0.74 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_23 - 176 SKI PF01202.17 158 1.7e-06 20.8 0.1 1 1 7.5e-08 7.2e-06 18.8 0.1 2 58 11 65 10 144 0.76 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_57 - 329 Shikimate_DH PF01488.15 135 0.00033 13.6 0.1 1 1 7.9e-06 0.00076 12.5 0.0 11 81 3 70 1 128 0.63 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_23 - 176 Cytidylate_kin2 PF13189.1 179 0.00016 14.4 0.1 1 1 4.9e-06 0.00047 12.9 0.1 2 32 4 34 3 147 0.82 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_57 - 329 F420_oxidored PF03807.12 96 0.00017 14.9 0.0 1 1 6.8e-06 0.00065 13.0 0.0 6 62 12 75 6 112 0.78 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_23 - 176 AAA_18 PF13238.1 129 2.9e-09 30.2 0.5 1 1 9.8e-11 9.4e-09 28.5 0.2 1 116 4 109 4 124 0.67 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_57 - 329 adh_short PF00106.20 167 8.3e-10 31.7 0.0 1 1 3.9e-11 1.3e-09 31.1 0.0 1 140 5 130 5 150 0.82 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_53 - 306 adh_short PF00106.20 167 2e-08 27.1 0.8 1 1 1.5e-08 4.7e-07 22.7 0.4 3 141 3 121 2 125 0.78 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_56 - 275 adh_short PF00106.20 167 0.00053 12.8 0.0 1 1 0.00013 0.0043 9.8 0.0 3 42 3 42 2 107 0.76 # 56815 # 57639 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 1_57 - 329 Polysacc_synt_2 PF02719.10 294 1.2e-101 332.3 0.2 1 1 4.6e-103 1.5e-101 332.0 0.2 1 290 7 279 7 283 0.96 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_53 - 306 Polysacc_synt_2 PF02719.10 294 1.1e-22 73.1 0.1 1 1 4e-23 1.3e-21 69.6 0.1 2 274 4 273 3 288 0.82 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_51 - 297 Polysacc_synt_2 PF02719.10 294 2.1e-08 26.2 0.0 1 1 1.7e-09 5.6e-08 24.8 0.0 2 246 8 247 7 261 0.72 # 51990 # 52880 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 1_23 - 176 AAA_14 PF13173.1 128 0.00015 14.6 2.3 1 2 7.4e-06 0.00071 12.4 0.0 5 57 4 57 2 92 0.76 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 AAA_14 PF13173.1 128 0.00015 14.6 2.3 2 2 0.011 1 2.1 0.7 29 75 107 147 80 171 0.59 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_16 - 224 Sulfotransfer_2 PF03567.9 253 5.1e-18 58.4 2.0 1 1 5e-19 4.8e-17 55.3 2.0 7 252 2 211 1 212 0.64 # 11399 # 12070 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.317 1_57 - 329 KR PF08659.5 181 3.9e-07 22.7 0.0 1 1 3.1e-08 9.9e-07 21.4 0.0 2 135 6 124 6 129 0.72 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_53 - 306 KR PF08659.5 181 6.3e-06 18.8 0.2 1 2 6.4e-05 0.002 10.6 0.0 4 29 4 30 2 45 0.91 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_53 - 306 KR PF08659.5 181 6.3e-06 18.8 0.2 2 2 0.0025 0.079 5.4 0.0 112 145 92 124 69 128 0.87 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_56 - 275 KR PF08659.5 181 0.00059 12.4 0.0 1 1 3.2e-05 0.001 11.6 0.0 3 55 3 55 2 67 0.74 # 56815 # 57639 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 1_23 - 176 AAA_33 PF13671.1 143 8.1e-08 25.1 0.0 1 1 3.3e-08 3.2e-06 19.9 0.0 2 68 4 63 4 130 0.68 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 KTI12 PF08433.5 270 4e-05 15.7 0.2 1 2 1.2e-06 0.00012 14.2 0.0 4 27 4 27 1 70 0.67 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 KTI12 PF08433.5 270 4e-05 15.7 0.2 2 2 0.052 4.9 -1.0 0.1 243 268 121 145 95 165 0.61 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 ABC_tran PF00005.22 137 0.00025 14.2 0.0 1 1 3.2e-06 0.00031 13.9 0.0 13 67 3 57 2 170 0.76 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_53 - 306 NAD_binding_4 PF07993.7 249 2.9e-22 71.6 0.0 1 2 4.4e-07 1.4e-05 16.9 0.0 1 25 5 29 5 35 0.90 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_53 - 306 NAD_binding_4 PF07993.7 249 2.9e-22 71.6 0.0 2 2 8.8e-18 2.8e-16 52.0 0.0 84 247 62 217 51 219 0.84 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_57 - 329 NAD_binding_4 PF07993.7 249 8.5e-17 53.7 0.0 1 1 2.3e-15 7.4e-14 44.0 0.0 1 144 9 135 9 212 0.79 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_51 - 297 NAD_binding_4 PF07993.7 249 0.00011 14.0 0.1 1 2 0.022 0.71 1.5 0.1 1 21 9 29 9 66 0.72 # 51990 # 52880 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 1_51 - 297 NAD_binding_4 PF07993.7 249 0.00011 14.0 0.1 2 2 5.2e-05 0.0017 10.1 0.0 153 242 119 207 86 214 0.66 # 51990 # 52880 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 1_56 - 275 RmlD_sub_bind PF04321.12 287 5.1e-33 107.0 0.0 1 1 2.6e-34 6.2e-33 106.7 0.0 1 240 1 237 1 249 0.93 # 56815 # 57639 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 1_53 - 306 RmlD_sub_bind PF04321.12 287 3.7e-28 91.0 0.0 1 1 1.9e-29 4.5e-28 90.7 0.0 1 223 1 244 1 292 0.89 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_57 - 329 RmlD_sub_bind PF04321.12 287 1.3e-16 53.1 0.0 1 1 2e-16 4.7e-15 48.0 0.0 2 157 6 172 5 194 0.82 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_51 - 297 RmlD_sub_bind PF04321.12 287 4.2e-08 25.2 0.0 1 1 2.7e-09 6.5e-08 24.6 0.0 3 89 7 104 5 114 0.94 # 51990 # 52880 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 1_57 - 329 NAD_binding_10 PF13460.1 183 5.9e-14 45.3 0.0 1 1 3.5e-15 8.3e-14 44.8 0.0 1 102 7 129 7 189 0.81 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_53 - 306 NAD_binding_10 PF13460.1 183 2.3e-12 40.1 0.0 1 1 3.3e-13 7.9e-12 38.4 0.0 2 180 4 222 4 225 0.70 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_56 - 275 NAD_binding_10 PF13460.1 183 8.9e-07 21.9 0.0 1 1 4.8e-08 1.2e-06 21.5 0.0 1 125 3 136 3 157 0.70 # 56815 # 57639 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 1_51 - 297 NAD_binding_10 PF13460.1 183 1.2e-05 18.3 0.0 1 1 6.4e-07 1.5e-05 17.9 0.0 2 150 8 168 7 198 0.78 # 51990 # 52880 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 2_5 - 73 DUF2407 PF10302.4 97 0.00055 13.0 0.3 1 1 6.5e-06 0.00062 12.8 0.3 33 78 6 47 3 67 0.77 # 2917 # 3135 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.292 1_53 - 306 3Beta_HSD PF01073.14 280 9.8e-30 96.0 0.1 1 1 2.7e-31 1.3e-29 95.5 0.1 1 232 4 226 4 239 0.83 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_57 - 329 3Beta_HSD PF01073.14 280 9e-29 92.8 0.1 1 1 1.2e-27 5.8e-26 83.6 0.1 1 122 8 131 8 193 0.82 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_53 - 306 ThiF PF00899.16 136 0.00031 13.4 0.6 1 1 5.7e-06 0.00054 12.6 0.1 5 58 4 57 1 123 0.83 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_23 - 176 PduV-EutP PF10662.4 143 0.00015 14.1 0.0 1 1 2.9e-06 0.00028 13.2 0.0 1 24 1 24 1 31 0.90 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_53 - 306 Epimerase PF01370.16 236 1.3e-62 204.1 0.1 1 1 7.2e-64 1.7e-62 203.7 0.1 2 230 4 228 3 240 0.93 # 54434 # 55351 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.365 1_51 - 297 Epimerase PF01370.16 236 9e-39 126.1 0.0 1 1 5e-40 1.2e-38 125.7 0.0 2 235 8 229 7 230 0.92 # 51990 # 52880 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 1_57 - 329 Epimerase PF01370.16 236 6.1e-29 93.9 0.0 1 1 3.1e-29 7.3e-28 90.4 0.0 1 223 7 212 7 223 0.90 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_56 - 275 Epimerase PF01370.16 236 2.2e-19 62.6 0.0 1 1 1.4e-20 3.4e-19 62.0 0.0 1 150 3 141 3 147 0.91 # 56815 # 57639 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 1_57 - 329 TrkA_N PF02254.13 116 0.00023 14.0 0.0 1 1 5.8e-06 0.00056 12.8 0.0 5 58 12 71 7 77 0.84 # 57640 # 58626 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.334 1_23 - 176 AAA_24 PF13479.1 213 4.5e-05 15.9 0.3 1 2 3.4e-06 0.00032 13.1 0.0 4 29 2 27 1 34 0.91 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 AAA_24 PF13479.1 213 4.5e-05 15.9 0.3 2 2 0.04 3.9 -0.2 0.0 167 210 86 126 82 129 0.65 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_23 - 176 AAA_28 PF13521.1 163 1.9e-06 20.7 0.1 1 1 3.4e-08 3.3e-06 20.0 0.1 1 25 3 28 3 71 0.77 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 1_22 - 1625 TOBE_2 PF08402.5 75 0.0002 14.2 0.1 1 3 0.012 1.1 2.2 0.0 6 53 691 738 688 747 0.79 # 23981 # 28855 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.407 1_22 - 1625 TOBE_2 PF08402.5 75 0.0002 14.2 0.1 2 3 0.0057 0.54 3.2 0.0 5 37 1054 1086 1051 1105 0.79 # 23981 # 28855 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.407 1_22 - 1625 TOBE_2 PF08402.5 75 0.0002 14.2 0.1 3 3 0.026 2.5 1.1 0.0 14 37 1152 1177 1143 1189 0.85 # 23981 # 28855 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.407 1_16 - 224 Gal-3-0_sulfotr PF06990.6 402 3.7e-09 28.5 1.8 1 2 9.7e-05 0.0093 7.4 2.3 69 172 6 98 2 120 0.75 # 11399 # 12070 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.317 1_16 - 224 Gal-3-0_sulfotr PF06990.6 402 3.7e-09 28.5 1.8 2 2 6.2e-09 5.9e-07 21.2 0.3 166 313 75 221 69 223 0.70 # 11399 # 12070 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.317 1_23 - 176 APS_kinase PF01583.15 157 0.00032 13.2 0.1 1 1 8.8e-06 0.00084 11.9 0.0 5 27 4 26 2 34 0.87 # 29008 # 29535 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.278 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5c04f70e-ccc7-4c67-9fcf-890580ee4d7d # Target file: checkm_output/bins/pGCA_000225265.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000225265.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5c04f70e-ccc7-4c67-9fcf-890580ee4d7d checkm_output/bins/pGCA_000225265.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:19 2020 # [ok]