# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 514 UPF0079 PF02367.12 123 6.1e-05 12.5 0.1 1 2 0.0085 0.094 2.2 0.0 70 100 215 245 203 257 0.79 # 3202 # 4743 # -1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=10bp;gc_cont=0.381 1_4 - 514 UPF0079 PF02367.12 123 6.1e-05 12.5 0.1 2 2 0.0002 0.0022 7.5 0.1 58 101 289 334 281 352 0.79 # 3202 # 4743 # -1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=10bp;gc_cont=0.381 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/7443159e-3ca9-4591-a3dc-82eb11c15337 # Target file: checkm_output/bins/pGCA_000224535.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000224535.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7443159e-3ca9-4591-a3dc-82eb11c15337 checkm_output/bins/pGCA_000224535.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:17 2020 # [ok]