# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_3 - 530 Methyltransf_12 PF08242.7 99 0.00071 14.3 0.1 1 2 0.00014 0.038 8.8 0.0 1 73 42 109 42 127 0.79 # 3734 # 5323 # 1 # ID=4_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.309 4_3 - 530 Methyltransf_12 PF08242.7 99 0.00071 14.3 0.1 2 2 0.0097 2.5 2.9 0.0 46 91 140 188 125 189 0.83 # 3734 # 5323 # 1 # ID=4_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.309 4_2 - 1000 UPF0020 PF01170.13 180 0.00034 14.5 0.0 1 2 0.013 1.7 2.4 0.0 57 78 456 486 391 493 0.72 # 728 # 3727 # 1 # ID=4_2;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303 4_2 - 1000 UPF0020 PF01170.13 180 0.00034 14.5 0.0 2 2 0.00011 0.014 9.2 0.0 104 146 558 603 543 614 0.71 # 728 # 3727 # 1 # ID=4_2;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303 1_25 - 1146 UPF0020 PF01170.13 180 0.00049 13.9 0.0 1 1 1.4e-05 0.0018 12.1 0.0 86 169 170 254 101 264 0.55 # 22501 # 25938 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 2_10 - 206 Seryl_tRNA_N PF02403.17 108 0.027 8.8 11.1 1 1 7.3e-05 0.019 9.3 9.1 37 90 29 82 24 98 0.66 # 9227 # 9844 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.414 3_12 - 213 Saccharop_dh PF03435.13 386 9.7e-07 22.3 0.2 1 1 5.1e-09 1.3e-06 21.8 0.2 1 92 4 95 4 140 0.82 # 13971 # 14609 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_7 - 673 IstB_IS21 PF01695.12 178 0.0017 12.0 0.1 1 3 0.00011 0.027 8.1 0.0 33 61 252 284 220 302 0.68 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_7 - 673 IstB_IS21 PF01695.12 178 0.0017 12.0 0.1 2 3 0.061 16 -0.9 0.1 86 118 354 386 349 393 0.77 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_7 - 673 IstB_IS21 PF01695.12 178 0.0017 12.0 0.1 3 3 0.051 13 -0.6 0.0 112 151 503 542 491 559 0.76 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 3_14 - 594 GIDA PF01134.17 392 0.00011 15.4 2.5 1 1 4.3e-07 0.00011 15.4 2.5 1 38 130 166 130 180 0.84 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 1_58 - 178 SSB PF00436.20 104 3.6e-32 104.6 0.1 1 1 1.4e-34 3.6e-32 104.6 0.1 1 104 2 103 2 103 0.98 # 52460 # 52993 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.378 3_14 - 594 Pyr_redox_2 PF07992.9 201 1.2e-09 32.6 0.0 1 1 4.5e-10 1.2e-07 26.1 0.0 1 197 130 561 130 564 0.75 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 2_21 - 643 DUF87 PF01935.12 229 4.5e-29 96.1 2.0 1 1 3.5e-29 3e-27 90.1 2.0 3 229 143 485 141 485 0.86 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 2_7 - 673 DUF87 PF01935.12 229 3.9e-08 27.6 2.5 1 1 4.5e-10 3.9e-08 27.6 2.5 16 224 263 482 255 507 0.75 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_138 - 746 DUF87 PF01935.12 229 3.3e-05 18.0 1.5 1 1 6.8e-07 5.9e-05 17.2 0.1 26 111 309 408 303 485 0.65 # 125915 # 128152 # 1 # ID=1_138;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 3_12 - 213 NmrA PF05368.8 233 2.6e-12 40.7 1.0 1 1 1.7e-14 4.6e-12 39.9 1.0 1 155 4 160 4 196 0.74 # 13971 # 14609 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_7 - 673 AAA_22 PF13401.1 131 3.1e-05 18.4 0.2 1 2 3.7e-05 0.0024 12.3 0.1 8 104 274 369 268 389 0.69 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_7 - 673 AAA_22 PF13401.1 131 3.1e-05 18.4 0.2 2 2 0.025 1.7 3.1 0.0 71 108 485 521 454 550 0.69 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_21 - 643 AAA_22 PF13401.1 131 0.00017 16.0 0.3 1 2 0.00077 0.05 8.0 0.0 5 27 164 186 163 218 0.80 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 2_21 - 643 AAA_22 PF13401.1 131 0.00017 16.0 0.3 2 2 0.01 0.67 4.4 0.0 36 113 288 390 273 411 0.64 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 1_82 - 413 AAA_22 PF13401.1 131 0.00019 15.9 0.0 1 1 3.5e-05 0.0023 12.4 0.0 5 69 45 131 41 238 0.57 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 2_29 - 531 AAA_22 PF13401.1 131 0.0027 12.1 3.7 1 2 0.0002 0.013 9.9 0.5 7 22 352 367 349 372 0.90 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 2_29 - 531 AAA_22 PF13401.1 131 0.0027 12.1 3.7 2 2 0.043 2.8 2.4 0.1 52 121 438 511 425 520 0.51 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 2_12 - 157 tRNA_anti-like PF12869.2 144 4.8e-05 17.1 0.1 1 1 2.9e-07 7.6e-05 16.5 0.1 6 60 70 139 67 143 0.88 # 10200 # 10670 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.423 2_29 - 531 AAA_17 PF13207.1 121 0.00072 14.7 0.5 1 1 2.1e-05 0.0018 13.4 0.4 1 26 351 375 351 470 0.58 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 1_138 - 746 AAA_17 PF13207.1 121 0.002 13.2 0.1 1 1 0.00034 0.03 9.4 0.0 3 32 310 345 308 441 0.77 # 125915 # 128152 # 1 # ID=1_138;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 2_7 - 673 AAA_17 PF13207.1 121 0.024 9.7 6.5 1 2 0.00054 0.047 8.8 1.1 3 15 274 286 274 289 0.89 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_7 - 673 AAA_17 PF13207.1 121 0.024 9.7 6.5 2 2 0.062 5.4 2.1 0.2 28 97 391 467 371 603 0.71 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_21 - 643 Miro PF08477.8 119 0.0013 13.5 0.1 1 1 2.9e-05 0.0075 11.0 0.0 1 36 165 198 165 222 0.79 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 1_41 - 236 Pept_tRNA_hydro PF01195.14 184 0.00075 13.3 0.0 1 2 4e-05 0.01 9.5 0.1 24 86 9 73 6 76 0.75 # 40924 # 41631 # 1 # ID=1_41;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.370 1_41 - 236 Pept_tRNA_hydro PF01195.14 184 0.00075 13.3 0.0 2 2 0.014 3.6 1.3 0.0 119 151 148 180 145 185 0.82 # 40924 # 41631 # 1 # ID=1_41;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.370 3_4 - 432 Helicase_C PF00271.26 78 4.1e-12 40.1 0.1 1 1 1.3e-13 1.2e-11 38.7 0.1 16 77 15 88 7 89 0.93 # 1742 # 3037 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.387 1_26 - 647 Helicase_C PF00271.26 78 1.1e-07 26.0 0.2 1 1 3.5e-09 3.1e-07 24.5 0.2 10 78 146 216 139 216 0.91 # 26089 # 28029 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.342 1_36 - 801 Helicase_C PF00271.26 78 2.1e-05 18.6 0.1 1 1 1.3e-06 0.00012 16.2 0.1 2 78 451 533 435 533 0.83 # 35833 # 38235 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.361 2_29 - 531 T2SE PF00437.15 272 0.001 12.3 0.0 1 1 7.1e-06 0.0019 11.4 0.0 117 152 338 373 308 382 0.73 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 1_38 - 294 TIGR00810 TIGR00810 73 3.7e-09 30.5 0.7 1 1 3.4e-11 8.8e-09 29.3 0.0 6 70 223 290 221 293 0.88 # 38418 # 39299 # -1 # ID=1_38;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.348 3_6 - 1155 Ribosomal_S19 PF00203.16 81 9.6e-05 16.3 1.1 1 1 8.1e-07 0.00021 15.2 0.0 46 69 935 958 933 960 0.92 # 5183 # 8647 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.342 2_29 - 531 Zeta_toxin PF06414.7 201 0.0018 11.6 0.0 1 1 1.5e-05 0.0038 10.6 0.0 19 55 352 389 339 392 0.94 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 3_14 - 594 NAD_binding_8 PF13450.1 68 2.6e-08 28.1 0.1 1 1 9.8e-11 2.6e-08 28.1 0.1 1 36 133 168 133 203 0.82 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 3_14 - 594 GMC_oxred_N PF00732.14 296 0.00086 12.7 1.5 1 2 0.0061 1.6 2.0 0.0 1 67 129 197 129 205 0.85 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 3_14 - 594 GMC_oxred_N PF00732.14 296 0.00086 12.7 1.5 2 2 7.8e-05 0.02 8.2 0.3 202 257 277 331 269 335 0.85 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 3_14 - 594 FAD_binding_3 PF01494.14 356 0.00017 14.9 0.5 1 1 1.3e-06 0.00034 14.0 0.5 1 33 128 160 128 179 0.86 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 2_21 - 643 Fer4_NifH PF00142.13 273 0.00061 13.3 0.1 1 2 0.00095 0.25 4.7 0.0 113 172 72 135 52 152 0.82 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 2_21 - 643 Fer4_NifH PF00142.13 273 0.00061 13.3 0.1 2 2 0.00041 0.11 5.9 0.2 3 25 166 188 164 195 0.85 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 1_82 - 413 Arch_ATPase PF01637.13 234 2.4e-08 28.2 4.0 1 2 2.4e-09 3.2e-07 24.5 0.5 23 141 46 210 38 240 0.79 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 1_82 - 413 Arch_ATPase PF01637.13 234 2.4e-08 28.2 4.0 2 2 0.023 2.9 1.7 0.5 82 144 264 336 215 348 0.66 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 2_7 - 673 Arch_ATPase PF01637.13 234 0.00082 13.3 7.2 1 1 2.4e-06 0.00031 14.7 2.8 20 135 270 392 263 501 0.81 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_29 - 531 AAA_16 PF13191.1 185 0.0005 14.3 0.2 1 1 1e-05 0.0014 12.9 0.0 25 42 350 367 338 377 0.85 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 2_7 - 673 AAA_16 PF13191.1 185 0.00079 13.7 0.1 1 1 0.00042 0.054 7.7 0.1 25 51 271 298 259 526 0.76 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_29 - 531 AAA_18 PF13238.1 129 0.00073 14.1 0.8 1 1 7e-06 0.0018 12.8 0.8 1 43 352 415 352 505 0.70 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 1_36 - 801 SecA_DEAD PF07517.9 266 1.8e-111 365.9 1.8 1 1 1.1e-113 2.9e-111 365.2 1.8 7 265 8 384 3 385 0.99 # 35833 # 38235 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.361 1_82 - 413 CbiA PF01656.18 195 0.0018 11.9 0.0 1 1 1e-05 0.0027 11.4 0.0 3 66 48 138 46 268 0.72 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 1_115 - 316 Ribosomal_S13 PF00416.17 107 0.00055 14.7 0.2 1 2 5.4e-05 0.014 10.1 0.1 11 36 103 128 97 174 0.68 # 107789 # 108736 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 1_115 - 316 Ribosomal_S13 PF00416.17 107 0.00055 14.7 0.2 2 2 0.031 8.1 1.3 0.0 19 36 184 201 169 215 0.77 # 107789 # 108736 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 1_25 - 1146 Methyltransf_25 PF13649.1 101 0.001 13.7 0.0 1 1 1.4e-05 0.0035 12.0 0.0 2 74 129 198 128 228 0.80 # 22501 # 25938 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_82 - 413 KaiC PF06745.8 227 1e-05 19.0 0.2 1 1 1.3e-07 3.5e-05 17.3 0.1 3 80 28 106 26 277 0.79 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 2_7 - 673 AAA_14 PF13173.1 128 9.5e-05 16.6 6.5 1 3 4.1e-06 0.00053 14.2 0.3 3 82 271 372 269 383 0.67 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_7 - 673 AAA_14 PF13173.1 128 9.5e-05 16.6 6.5 2 3 0.065 8.5 0.6 0.0 92 123 442 472 407 478 0.78 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_7 - 673 AAA_14 PF13173.1 128 9.5e-05 16.6 6.5 3 3 0.0081 1.1 3.5 0.1 31 89 462 527 443 564 0.57 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_82 - 413 AAA_14 PF13173.1 128 0.001 13.2 0.7 1 1 4e-05 0.0053 10.9 0.1 12 64 54 107 44 205 0.76 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 3_14 - 594 HI0933_like PF03486.9 409 2e-06 20.8 2.9 1 1 7.8e-08 2e-05 17.4 2.9 1 107 129 248 129 330 0.78 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 1_115 - 316 TIGR00084 TIGR00084 192 5.5e-06 19.9 0.5 1 3 0.0011 0.3 4.5 0.1 107 129 107 129 100 175 0.81 # 107789 # 108736 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 1_115 - 316 TIGR00084 TIGR00084 192 5.5e-06 19.9 0.5 2 3 1e-05 0.0027 11.1 0.0 102 137 175 212 163 230 0.77 # 107789 # 108736 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 1_115 - 316 TIGR00084 TIGR00084 192 5.5e-06 19.9 0.5 3 3 0.013 3.4 1.0 0.1 115 142 237 274 222 312 0.66 # 107789 # 108736 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 2_29 - 531 AAA_29 PF13555.1 62 9.1e-05 16.2 0.1 1 1 2.7e-06 0.00024 14.9 0.1 18 40 345 366 338 369 0.76 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 1_138 - 746 AAA_29 PF13555.1 62 0.0011 12.8 0.2 1 1 2.8e-05 0.0025 11.6 0.2 25 39 308 322 295 323 0.78 # 125915 # 128152 # 1 # ID=1_138;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 2_21 - 643 AAA_29 PF13555.1 62 0.0015 12.3 0.3 1 2 0.013 1.1 3.2 0.0 35 44 144 153 140 160 0.89 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 2_21 - 643 AAA_29 PF13555.1 62 0.0015 12.3 0.3 2 2 0.001 0.09 6.6 0.1 26 43 166 183 154 198 0.77 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 3_14 - 594 FAD_binding_2 PF00890.19 417 4.7e-58 191.2 2.8 1 1 1.8e-60 4.7e-58 191.2 2.8 1 417 130 576 130 576 0.88 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 1_82 - 413 AAA PF00004.24 132 0.00011 16.6 0.1 1 1 3.4e-06 0.0009 13.7 0.1 6 52 52 185 47 250 0.65 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 2_7 - 673 TK PF00265.13 176 0.002 11.9 3.8 1 2 9.4e-06 0.0024 11.7 0.0 4 42 273 311 270 369 0.79 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_7 - 673 TK PF00265.13 176 0.002 11.9 3.8 2 2 0.041 11 -0.2 0.1 57 89 480 512 466 524 0.61 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 3_14 - 594 Thi4 PF01946.12 230 3e-10 33.8 6.3 1 3 0.073 19 -1.5 0.1 65 190 30 50 12 98 0.52 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 3_14 - 594 Thi4 PF01946.12 230 3e-10 33.8 6.3 2 3 3e-11 7.8e-09 29.2 0.2 6 56 116 167 111 177 0.83 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 3_14 - 594 Thi4 PF01946.12 230 3e-10 33.8 6.3 3 3 0.0002 0.052 6.9 0.2 94 137 266 311 246 333 0.83 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 3_14 - 594 Pyr_redox_3 PF13738.1 203 0.011 10.0 4.0 1 1 9.3e-06 0.0024 12.2 0.2 2 46 133 176 132 325 0.79 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 4_3 - 530 N6_Mtase PF02384.11 311 1.4e-16 54.7 0.3 1 2 1.4e-17 1.8e-15 51.0 0.1 18 266 9 247 4 279 0.77 # 3734 # 5323 # 1 # ID=4_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.309 4_3 - 530 N6_Mtase PF02384.11 311 1.4e-16 54.7 0.3 2 2 0.092 12 -1.0 0.0 222 273 313 370 309 376 0.70 # 3734 # 5323 # 1 # ID=4_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.309 4_2 - 1000 N6_Mtase PF02384.11 311 5.4e-13 42.9 2.3 1 1 1.4e-12 1.8e-10 34.6 2.3 5 280 355 714 352 729 0.76 # 728 # 3727 # 1 # ID=4_2;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303 2_29 - 531 DUF258 PF03193.11 161 3e-05 17.5 0.0 1 1 4.1e-07 5.3e-05 16.7 0.0 29 59 342 373 317 454 0.76 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 2_7 - 673 DUF258 PF03193.11 161 0.0022 11.4 0.0 1 1 4.3e-05 0.0056 10.1 0.0 34 51 269 286 250 302 0.78 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_133 - 77 Ribosomal_S5 PF00333.15 67 0.00057 13.9 0.1 1 1 3.6e-06 0.00094 13.2 0.1 32 62 44 74 41 76 0.86 # 122907 # 123137 # 1 # ID=1_133;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.338 2_13 - 515 TraG-D_C PF12696.2 128 3.1e-42 137.7 0.0 1 1 3.6e-44 3.1e-42 137.7 0.0 2 128 282 405 281 405 0.91 # 10672 # 12216 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.430 1_90 - 1257 TraG-D_C PF12696.2 128 2e-12 41.4 3.2 1 1 2.5e-13 2.2e-11 38.0 0.0 5 127 590 710 588 711 0.88 # 80170 # 83940 # 1 # ID=1_90;partial=00;start_type=GTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.368 2_7 - 673 TraG-D_C PF12696.2 128 0.00012 16.3 0.3 1 1 8.9e-06 0.00077 13.6 0.3 15 100 518 631 502 662 0.62 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_82 - 413 AAA_31 PF13614.1 157 0.00049 14.3 0.1 1 1 4.2e-06 0.0011 13.2 0.1 5 38 48 82 46 93 0.86 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 1_82 - 413 DnaB_C PF03796.10 259 1.6e-26 87.0 0.1 1 1 1.2e-27 3.2e-25 82.7 0.1 2 215 26 273 25 323 0.82 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 1_25 - 1146 Methyltransf_26 PF13659.1 117 4.1e-18 59.8 0.0 1 1 2.2e-19 1.1e-17 58.4 0.0 3 116 127 237 125 238 0.91 # 22501 # 25938 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 4_2 - 1000 Methyltransf_26 PF13659.1 117 1.4e-12 41.9 0.0 1 1 7e-14 3.6e-12 40.6 0.0 2 116 420 623 419 624 0.79 # 728 # 3727 # 1 # ID=4_2;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303 4_3 - 530 Methyltransf_26 PF13659.1 117 3.8e-10 34.1 0.0 1 1 1.3e-11 6.6e-10 33.3 0.0 2 116 39 166 38 167 0.81 # 3734 # 5323 # 1 # ID=4_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.309 3_6 - 1155 Methyltransf_26 PF13659.1 117 6.5e-06 20.5 0.0 1 1 3.1e-07 1.6e-05 19.2 0.0 2 80 482 682 481 788 0.80 # 5183 # 8647 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.342 2_23 - 68 Methyltransf_26 PF13659.1 117 0.00015 16.0 0.0 1 1 2.9e-06 0.00015 16.0 0.0 53 85 10 42 5 66 0.82 # 21239 # 21442 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.387 2_21 - 643 FtsK_SpoIIIE PF01580.13 205 2.5e-05 18.1 0.0 1 1 5.8e-07 7.6e-05 16.5 0.0 30 77 153 204 129 225 0.72 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 2_7 - 673 FtsK_SpoIIIE PF01580.13 205 9.4e-05 16.2 0.0 1 1 1.8e-06 0.00024 14.9 0.0 40 80 272 308 251 322 0.78 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 4_3 - 530 MTS PF05175.9 170 6.1e-07 23.2 0.0 1 1 1.2e-08 1.1e-06 22.4 0.0 34 144 40 169 26 190 0.69 # 3734 # 5323 # 1 # ID=4_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.309 1_25 - 1146 MTS PF05175.9 170 4.9e-05 17.0 0.2 1 1 6.8e-06 0.00059 13.5 0.0 32 153 125 252 117 262 0.69 # 22501 # 25938 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 4_2 - 1000 MTS PF05175.9 170 0.00038 14.1 0.1 1 1 2.7e-05 0.0023 11.5 0.0 92 144 555 626 522 642 0.84 # 728 # 3727 # 1 # ID=4_2;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303 3_9 - 429 AAA_35 PF14516.1 331 0.0016 11.3 0.0 1 1 1.1e-05 0.0028 10.5 0.0 199 247 299 351 274 418 0.76 # 10616 # 11902 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.333 2_29 - 531 ABC_tran PF00005.22 137 1.4e-31 103.9 0.1 1 1 1.4e-33 3.8e-31 102.5 0.1 2 137 340 487 339 487 0.90 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 4_2 - 1000 Eco57I PF07669.6 106 1.5e-13 45.3 3.3 1 1 2e-15 1.8e-13 45.1 0.6 2 104 560 671 559 674 0.89 # 728 # 3727 # 1 # ID=4_2;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303 4_3 - 530 Eco57I PF07669.6 106 1.2e-10 35.9 0.0 1 1 1.6e-11 1.4e-09 32.6 0.0 3 97 103 208 100 216 0.86 # 3734 # 5323 # 1 # ID=4_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.309 3_6 - 1155 Eco57I PF07669.6 106 1.3e-08 29.4 1.2 1 2 0.0026 0.23 6.1 0.0 3 16 673 686 670 699 0.81 # 5183 # 8647 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.342 3_6 - 1155 Eco57I PF07669.6 106 1.3e-08 29.4 1.2 2 2 3.7e-07 3.3e-05 18.5 0.0 23 94 757 829 746 842 0.84 # 5183 # 8647 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.342 1_82 - 413 AAA_19 PF13245.1 76 0.0014 12.7 0.0 1 1 9.5e-06 0.0025 11.9 0.0 10 48 44 79 38 106 0.76 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 3_12 - 213 NAD_binding_10 PF13460.1 183 3.5e-41 135.5 0.3 1 1 1.5e-43 4e-41 135.3 0.3 1 182 4 187 4 188 0.98 # 13971 # 14609 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.412 2_7 - 673 AAA_10 PF12846.2 304 6.3e-55 180.9 0.7 1 1 2.2e-56 1.1e-54 180.1 0.7 1 294 270 579 270 588 0.87 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_138 - 746 AAA_10 PF12846.2 304 8.7e-36 118.1 0.0 1 1 2.8e-37 1.5e-35 117.3 0.0 1 303 306 682 306 683 0.85 # 125915 # 128152 # 1 # ID=1_138;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 2_21 - 643 AAA_10 PF12846.2 304 4.4e-21 69.8 0.5 1 1 2.2e-22 1.2e-20 68.4 0.5 2 296 164 579 163 584 0.71 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 2_13 - 515 AAA_10 PF12846.2 304 7.3e-15 49.4 0.1 1 1 1.9e-16 1e-14 48.9 0.1 1 302 23 362 23 364 0.71 # 10672 # 12216 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.430 1_82 - 413 AAA_10 PF12846.2 304 0.0013 12.4 0.0 1 1 3.7e-05 0.0019 11.9 0.0 2 139 45 204 44 256 0.65 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 3_14 - 594 FAD_oxidored PF12831.2 428 3.7e-13 43.5 2.5 1 1 4e-15 1.1e-12 42.0 2.5 1 140 130 321 130 324 0.75 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 3_14 - 594 DAO PF01266.19 358 8e-14 45.5 5.8 1 1 5e-15 1.3e-12 41.5 5.8 1 199 130 328 130 332 0.68 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 3_12 - 213 3Beta_HSD PF01073.14 280 3.8e-06 20.0 0.3 1 1 1.1e-07 3e-05 17.1 0.3 1 119 5 106 5 115 0.74 # 13971 # 14609 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_25 - 1146 ResIII PF04851.10 184 2.5e-12 41.2 2.6 1 1 2.9e-14 2.5e-12 41.2 2.6 2 159 891 1082 890 1090 0.64 # 22501 # 25938 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 3_5 - 676 ResIII PF04851.10 184 1.8e-08 28.6 0.3 1 2 2.8e-05 0.0024 12.0 0.0 3 70 252 320 246 340 0.82 # 3143 # 5170 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.375 3_5 - 676 ResIII PF04851.10 184 1.8e-08 28.6 0.3 2 2 2.8e-05 0.0025 11.9 0.0 141 182 345 393 325 395 0.74 # 3143 # 5170 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.375 2_21 - 643 ResIII PF04851.10 184 0.00027 15.0 0.2 1 2 0.0021 0.18 5.9 0.0 32 52 170 198 150 234 0.80 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 2_21 - 643 ResIII PF04851.10 184 0.00027 15.0 0.2 2 2 0.0018 0.15 6.1 0.1 89 178 451 545 424 547 0.67 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 3_12 - 213 Epimerase PF01370.16 236 1.8e-10 34.9 0.2 1 1 8.3e-12 2.2e-09 31.3 0.2 1 148 4 137 4 151 0.80 # 13971 # 14609 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_25 - 1146 DEAD PF00270.24 169 2.6e-07 24.6 0.2 1 2 6.5e-08 8.4e-06 19.6 0.1 2 106 895 1000 894 1022 0.77 # 22501 # 25938 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_25 - 1146 DEAD PF00270.24 169 2.6e-07 24.6 0.2 2 2 0.011 1.5 2.5 0.0 117 138 1062 1088 1004 1137 0.59 # 22501 # 25938 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_36 - 801 DEAD PF00270.24 169 4.7e-07 23.7 0.0 1 1 9.7e-09 1.3e-06 22.3 0.0 17 133 94 212 81 229 0.80 # 35833 # 38235 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.361 3_14 - 594 Pyr_redox PF00070.22 80 0.00043 15.0 1.1 1 2 5.5e-05 0.014 10.1 0.1 2 35 131 164 130 189 0.82 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 3_14 - 594 Pyr_redox PF00070.22 80 0.00043 15.0 1.1 2 2 0.014 3.7 2.3 0.1 44 72 273 300 265 310 0.77 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 2_13 - 515 TrwB_AAD_bind PF10412.4 386 1.7e-35 116.5 0.5 1 1 4.3e-36 2.8e-34 112.6 0.0 13 381 21 419 14 423 0.74 # 10672 # 12216 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.430 1_90 - 1257 TrwB_AAD_bind PF10412.4 386 5.3e-18 59.0 0.0 1 1 2.3e-19 1.5e-17 57.5 0.0 170 378 513 722 494 727 0.83 # 80170 # 83940 # 1 # ID=1_90;partial=00;start_type=GTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.368 2_21 - 643 TrwB_AAD_bind PF10412.4 386 8e-07 22.2 0.0 1 1 3e-08 2e-06 20.9 0.0 17 62 165 216 155 222 0.90 # 18004 # 19932 # -1 # ID=2_21;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 2_7 - 673 TrwB_AAD_bind PF10412.4 386 1.5e-06 21.3 0.1 1 2 6.3e-05 0.0041 10.0 0.0 12 56 267 311 257 318 0.75 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_7 - 673 TrwB_AAD_bind PF10412.4 386 1.5e-06 21.3 0.1 2 2 0.00013 0.0084 8.9 0.0 237 312 493 575 478 663 0.84 # 4629 # 6647 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_13 - 515 T4SS-DNA_transf PF02534.9 469 3.3e-132 435.6 5.6 1 1 1.6e-134 4.3e-132 435.2 5.6 45 450 24 443 5 485 0.93 # 10672 # 12216 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.430 4_3 - 530 TIGR00755 TIGR00755 256 1.4e-05 18.5 0.0 1 1 1e-07 2.7e-05 17.5 0.0 22 104 30 112 20 118 0.87 # 3734 # 5323 # 1 # ID=4_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.309 3_14 - 594 Amino_oxidase PF01593.19 450 0.0022 11.3 0.1 1 1 1.5e-05 0.0039 10.5 0.1 1 28 138 165 138 171 0.96 # 15302 # 17083 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.396 1_142 - 149 MethyltransfD12 PF02086.10 260 2.1e-05 18.3 0.4 1 1 9.5e-08 2.5e-05 18.1 0.4 11 119 26 143 21 147 0.63 # 134377 # 134823 # 1 # ID=1_142;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.304 2_29 - 531 RNA_helicase PF00910.17 107 0.00013 16.4 0.0 1 1 1.5e-06 0.00039 14.8 0.0 1 68 352 416 352 424 0.78 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 3_12 - 213 TrkA_N PF02254.13 116 0.0027 12.0 1.5 1 1 1.4e-05 0.0038 11.5 0.6 1 68 4 71 4 101 0.78 # 13971 # 14609 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.412 1_58 - 178 tRNA_anti-codon PF01336.20 75 9.8e-06 19.7 0.2 1 1 7e-08 1.8e-05 18.8 0.2 28 73 48 96 45 98 0.88 # 52460 # 52993 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.378 2_29 - 531 NACHT PF05729.7 166 0.0018 12.2 0.3 1 1 1.3e-05 0.0035 11.3 0.3 3 19 352 368 350 373 0.88 # 25891 # 27483 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.261 1_82 - 413 AAA_25 PF13481.1 194 7.4e-15 49.1 0.0 1 1 1.9e-16 5e-14 46.4 0.0 33 190 44 240 32 243 0.73 # 74698 # 75936 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.324 1_35 - 431 TIGR00967 TIGR00967 414 2.9e-107 353.0 31.2 1 1 1.3e-109 3.4e-107 352.8 31.2 2 413 14 417 13 418 0.94 # 34528 # 35820 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.334 3_5 - 676 SNF2_N PF00176.18 299 6.8e-14 45.5 2.5 1 3 6.1e-06 0.0008 12.5 0.0 26 77 272 320 256 323 0.81 # 3143 # 5170 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.375 3_5 - 676 SNF2_N PF00176.18 299 6.8e-14 45.5 2.5 2 3 1.3e-11 1.7e-09 31.1 0.1 129 259 345 489 330 557 0.80 # 3143 # 5170 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.375 3_5 - 676 SNF2_N PF00176.18 299 6.8e-14 45.5 2.5 3 3 0.045 5.9 -0.2 0.2 207 262 607 663 577 673 0.73 # 3143 # 5170 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.375 1_25 - 1146 SNF2_N PF00176.18 299 3e-13 43.4 0.0 1 1 4.7e-15 6.2e-13 42.4 0.0 27 187 909 1145 896 1145 0.81 # 22501 # 25938 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/96ae404d-5f5e-493f-9ed3-01cb33078514 # Target file: checkm_output/bins/pGCA_000214785.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000214785.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/96ae404d-5f5e-493f-9ed3-01cb33078514 checkm_output/bins/pGCA_000214785.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:16 2020 # [ok]