# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 252 Seryl_tRNA_N PF02403.17 108 1.2e-05 15.0 9.1 1 2 0.0017 0.017 4.9 2.2 3 48 114 159 113 166 0.80 # 119 # 874 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_1 - 252 Seryl_tRNA_N PF02403.17 108 1.2e-05 15.0 9.1 2 2 1.2e-06 1.2e-05 15.0 9.1 9 96 150 232 144 243 0.81 # 119 # 874 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/93d81b52-d3b3-4c52-87b3-c3df0e875173 # Target file: checkm_output/bins/pGCA_000204275.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000204275.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/93d81b52-d3b3-4c52-87b3-c3df0e875173 checkm_output/bins/pGCA_000204275.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:08 2020 # [ok]