# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_47 - 325 Mg_chelatase PF01078.16 207 3.2e-05 15.0 0.0 1 1 1.4e-06 6.4e-05 14.0 0.0 12 44 143 175 136 228 0.75 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 cobW PF02492.14 178 9.5e-06 17.0 0.5 1 1 5.9e-07 2.8e-05 15.5 0.5 4 43 157 198 155 274 0.81 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 IstB_IS21 PF01695.12 178 1.5e-05 16.3 0.0 1 1 5.6e-07 2.6e-05 15.5 0.0 44 74 150 180 131 210 0.87 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_14 - 255 MipZ PF09140.6 261 1.3e-10 32.6 0.1 1 1 5.6e-11 1.3e-09 29.3 0.1 3 129 4 145 2 166 0.72 # 8494 # 9258 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_20 - 242 MipZ PF09140.6 261 0.00013 12.9 0.1 1 2 2.9e-05 0.00068 10.5 0.0 6 47 8 49 3 66 0.86 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_20 - 242 MipZ PF09140.6 261 0.00013 12.9 0.1 2 2 0.04 0.93 0.3 0.0 73 106 55 88 48 99 0.81 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_14 - 255 YhjQ PF06564.7 244 4.7e-05 14.6 0.3 1 1 2.6e-05 0.0012 10.0 0.3 4 238 4 249 1 254 0.60 # 8494 # 9258 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_47 - 325 AIG1 PF04548.11 212 0.00015 12.7 0.1 1 1 5.1e-06 0.00024 12.1 0.1 1 27 154 180 154 201 0.85 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_2 - 114 SSB PF00436.20 104 3.4e-30 95.9 0.0 1 1 8e-32 3.8e-30 95.7 0.0 2 104 4 104 3 104 0.96 # 766 # 1107 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.596 1_31 - 166 Methyltransf_18 PF12847.2 112 8.4e-05 15.0 0.0 1 1 2.5e-06 0.00012 14.5 0.0 20 71 38 86 31 123 0.74 # 29538 # 30035 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.645 1_47 - 325 AAA_2 PF07724.9 171 0.00032 12.5 0.1 1 2 0.048 2.3 -0.1 0.0 142 165 9 32 4 37 0.83 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 AAA_2 PF07724.9 171 0.00032 12.5 0.1 2 2 3.9e-05 0.0018 10.0 0.0 4 54 154 204 151 211 0.85 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 DUF87 PF01935.12 229 1.7e-07 23.1 0.0 1 1 5.6e-09 2.6e-07 22.5 0.0 24 63 154 194 140 235 0.81 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 NB-ARC PF00931.17 287 0.00019 12.2 0.0 1 1 5.8e-06 0.00027 11.6 0.0 22 58 156 192 144 204 0.80 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 Septin PF00735.13 281 6.3e-06 17.1 0.1 1 1 2e-07 9.6e-06 16.6 0.1 6 50 155 196 152 219 0.70 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_44 - 853 AAA_22 PF13401.1 131 2.2e-05 16.5 0.1 1 2 0.00072 0.017 7.1 0.0 5 30 489 514 485 559 0.85 # 39248 # 41806 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_44 - 853 AAA_22 PF13401.1 131 2.2e-05 16.5 0.1 2 2 0.00087 0.02 6.9 0.0 75 100 676 701 620 733 0.77 # 39248 # 41806 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_47 - 325 AAA_22 PF13401.1 131 5.1e-05 15.3 0.0 1 1 4e-06 9.4e-05 14.4 0.0 5 36 154 185 150 224 0.72 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 ATP_bind_1 PF03029.12 238 0.00022 12.6 0.0 1 1 7e-06 0.00033 12.0 0.0 1 19 158 176 158 214 0.87 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_14 - 255 SRP54 PF00448.17 196 0.00031 12.0 0.6 1 2 0.0005 0.023 5.9 0.1 11 43 12 44 3 55 0.90 # 8494 # 9258 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_14 - 255 SRP54 PF00448.17 196 0.00031 12.0 0.6 2 2 0.0024 0.11 3.7 0.0 48 92 80 123 74 133 0.70 # 8494 # 9258 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_47 - 325 AAA_17 PF13207.1 121 5e-05 16.0 0.0 1 1 2.3e-06 0.00011 14.9 0.0 2 20 156 174 155 241 0.81 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 Miro PF08477.8 119 1.2e-05 17.7 0.0 1 1 4.8e-07 2.2e-05 16.8 0.0 2 26 156 181 155 247 0.75 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 MobB PF03205.9 140 6.5e-06 17.8 0.0 1 1 3.3e-07 1.6e-05 16.5 0.0 3 28 156 181 154 204 0.81 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_20 - 242 ArsA_ATPase PF02374.10 305 1.1e-08 26.2 0.0 1 1 8.5e-10 2e-08 25.4 0.0 4 41 6 43 3 87 0.91 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_14 - 255 ArsA_ATPase PF02374.10 305 0.00023 12.0 0.3 1 2 0.00013 0.003 8.4 0.0 9 39 10 40 2 52 0.88 # 8494 # 9258 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_14 - 255 ArsA_ATPase PF02374.10 305 0.00023 12.0 0.3 2 2 0.02 0.46 1.2 0.1 125 137 113 125 93 177 0.76 # 8494 # 9258 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_47 - 325 PhoH PF02562.11 205 3.8e-05 14.8 0.1 1 1 1.4e-06 6.7e-05 14.0 0.1 9 56 143 190 137 202 0.83 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 T2SE PF00437.15 272 6.2e-89 289.3 0.1 1 1 1.5e-90 7.2e-89 289.1 0.1 5 271 31 299 27 300 0.97 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 Zeta_toxin PF06414.7 201 2.5e-05 15.2 0.0 1 1 2e-06 4.6e-05 14.4 0.0 16 46 153 186 141 223 0.69 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_20 - 242 Zeta_toxin PF06414.7 201 0.00035 11.5 0.0 1 1 2.4e-05 0.00055 10.9 0.0 19 85 6 76 2 123 0.75 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_20 - 242 Fer4_NifH PF00142.13 273 0.00019 12.4 0.1 1 1 6.5e-06 0.00031 11.8 0.1 4 39 7 42 4 60 0.91 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_47 - 325 Arch_ATPase PF01637.13 234 3.1e-05 15.6 0.0 1 1 1.1e-06 5.2e-05 14.8 0.0 22 56 155 190 145 224 0.74 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 AAA_16 PF13191.1 185 2.6e-06 19.4 0.0 1 1 8.7e-08 4.1e-06 18.7 0.0 24 48 153 177 140 289 0.76 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 AAA_23 PF13476.1 202 0.00013 14.2 0.7 1 1 4.9e-06 0.00023 13.3 0.7 22 39 156 173 152 174 0.92 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 AAA_18 PF13238.1 129 0.00042 12.5 0.0 1 1 1.9e-05 0.00091 11.4 0.0 1 18 156 173 156 212 0.82 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_14 - 255 CbiA PF01656.18 195 1.6e-48 156.5 0.0 1 1 8.7e-50 2e-48 156.2 0.0 2 195 5 216 4 216 0.84 # 8494 # 9258 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_20 - 242 CbiA PF01656.18 195 7.6e-10 30.3 0.2 1 1 3.8e-11 9e-10 30.1 0.2 2 45 6 49 5 216 0.80 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_47 - 325 AAA_14 PF13173.1 128 0.00033 12.4 0.0 1 1 1.1e-05 0.00051 11.8 0.0 3 36 154 189 152 230 0.74 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 AAA_29 PF13555.1 62 1.6e-07 22.7 0.0 1 1 1.4e-08 3.2e-07 21.7 0.0 22 45 152 175 144 186 0.84 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_44 - 853 AAA_29 PF13555.1 62 0.00025 12.4 0.0 1 1 2.9e-05 0.00068 11.1 0.0 23 40 489 505 479 513 0.80 # 39248 # 41806 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_47 - 325 AAA PF00004.24 132 3.5e-05 15.9 0.0 1 1 1.5e-06 6.9e-05 14.9 0.0 1 23 156 178 156 229 0.80 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 Bac_DnaA PF00308.13 219 7.8e-05 14.2 0.0 1 1 2.2e-06 0.0001 13.8 0.0 34 71 153 190 127 234 0.80 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 Sigma54_activat PF00158.21 168 0.00015 13.1 0.0 1 1 6.1e-06 0.00029 12.2 0.0 13 55 144 189 134 202 0.73 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 MMR_HSR1 PF01926.18 116 3.1e-05 15.8 0.1 1 1 1.2e-06 5.7e-05 14.9 0.1 2 26 156 179 155 220 0.73 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 DUF258 PF03193.11 161 3.5e-05 14.9 0.0 1 1 1.2e-06 5.5e-05 14.2 0.0 27 60 144 178 126 221 0.75 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_24 - 638 TraG-D_C PF12696.2 128 6.2e-35 111.7 0.0 1 1 4.3e-36 1e-34 111.0 0.0 1 127 444 568 444 569 0.90 # 17501 # 19414 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.662 1_44 - 853 TraG-D_C PF12696.2 128 0.00034 12.3 0.0 1 1 3.4e-05 0.0008 11.1 0.0 4 72 691 763 688 781 0.74 # 39248 # 41806 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_20 - 242 AAA_31 PF13614.1 157 0.00014 13.7 0.0 1 1 2e-05 0.00046 12.0 0.0 1 47 3 49 3 91 0.84 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_14 - 255 AAA_31 PF13614.1 157 0.00027 12.8 0.1 1 1 3.7e-05 0.00087 11.1 0.1 9 155 10 151 9 153 0.71 # 8494 # 9258 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_31 - 166 Methyltransf_26 PF13659.1 117 6.6e-05 14.8 0.0 1 1 1.7e-06 7.8e-05 14.6 0.0 3 93 25 105 23 155 0.79 # 29538 # 30035 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.645 1_47 - 325 AAA_30 PF13604.1 196 3.7e-06 18.5 0.0 1 1 1.3e-07 5.9e-06 17.8 0.0 3 53 139 190 137 222 0.81 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 FtsK_SpoIIIE PF01580.13 205 3e-10 31.7 0.0 1 1 1.2e-11 5.8e-10 30.8 0.0 28 85 143 199 132 223 0.83 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 Dynamin_N PF00350.18 168 8.6e-05 14.2 0.0 1 1 2.8e-06 0.00013 13.6 0.0 1 23 156 178 156 213 0.88 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_44 - 853 ABC_tran PF00005.22 137 2e-06 20.0 0.0 1 2 3.3e-06 7.7e-05 14.9 0.0 5 41 482 518 480 594 0.88 # 39248 # 41806 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_44 - 853 ABC_tran PF00005.22 137 2e-06 20.0 0.0 2 2 0.059 1.4 1.1 0.0 119 135 680 696 678 697 0.90 # 39248 # 41806 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_47 - 325 ABC_tran PF00005.22 137 5.3e-06 18.6 0.0 1 1 3.8e-07 8.9e-06 17.9 0.0 8 36 150 178 145 234 0.80 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 AAA_19 PF13245.1 76 4.2e-08 24.8 0.1 1 1 2.6e-09 1.2e-07 23.3 0.1 2 52 145 193 144 199 0.73 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_44 - 853 AAA_10 PF12846.2 304 6.5e-35 112.8 0.1 1 1 7.2e-36 1.1e-34 112.0 0.1 2 294 489 761 488 773 0.86 # 39248 # 41806 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_47 - 325 AAA_10 PF12846.2 304 2.8e-08 25.3 0.0 1 1 2.1e-09 3.4e-08 25.0 0.0 2 41 154 195 153 293 0.86 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_20 - 242 AAA_10 PF12846.2 304 1.4e-05 16.4 0.0 1 1 1.3e-06 2e-05 15.9 0.0 3 47 5 49 3 119 0.82 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_47 - 325 ResIII PF04851.10 184 2.5e-05 16.0 0.0 1 1 8.1e-07 3.8e-05 15.4 0.0 7 62 69 195 64 218 0.68 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_16 - 344 DUF3584 PF12128.3 1201 0.0004 9.6 51.4 1 1 0.00011 0.0053 5.8 52.0 251 484 88 329 82 338 0.81 # 10484 # 11515 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.749 1_47 - 325 DUF2075 PF09848.4 352 0.0002 12.2 0.0 1 1 5.9e-06 0.00028 11.7 0.0 2 46 154 197 153 224 0.77 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 Adeno_IVa2 PF02456.10 370 3.2e-05 14.5 0.0 1 1 9.5e-07 4.5e-05 14.0 0.0 91 129 157 195 144 222 0.84 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 PduV-EutP PF10662.4 143 3.6e-06 18.4 0.1 1 1 1.3e-07 6.3e-06 17.6 0.1 2 43 154 197 153 220 0.80 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 DEAD PF00270.24 169 1.8e-06 19.4 0.1 1 1 6.2e-08 2.9e-06 18.7 0.1 3 60 141 199 139 233 0.76 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 DUF815 PF05673.8 250 0.0001 13.1 0.0 1 1 3.2e-06 0.00015 12.6 0.0 50 79 149 179 127 206 0.83 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_24 - 638 TrwB_AAD_bind PF10412.4 386 5.2e-29 92.8 0.0 1 1 5.1e-30 1.2e-28 91.6 0.0 17 366 177 568 169 574 0.82 # 17501 # 19414 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.662 1_47 - 325 TrwB_AAD_bind PF10412.4 386 2.2e-06 18.3 0.0 1 1 1.3e-07 3.2e-06 17.8 0.0 13 55 151 195 146 212 0.85 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 AAA_11 PF13086.1 236 0.00015 13.2 0.0 1 1 5e-06 0.00023 12.6 0.0 4 42 140 189 137 250 0.67 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 Sigma54_activ_2 PF14532.1 138 0.00017 13.5 0.0 1 1 6.6e-06 0.00031 12.7 0.0 12 44 144 176 139 203 0.86 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_24 - 638 T4SS-DNA_transf PF02534.9 469 6.2e-165 541.0 0.0 1 1 1.6e-166 7.6e-165 540.7 0.0 1 464 121 620 121 624 0.98 # 17501 # 19414 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.662 1_31 - 166 MethyltransfD12 PF02086.10 260 3.7e-06 18.3 0.1 1 2 0.00043 0.02 6.1 0.0 8 60 12 61 3 68 0.83 # 29538 # 30035 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.645 1_31 - 166 MethyltransfD12 PF02086.10 260 3.7e-06 18.3 0.1 2 2 2.3e-05 0.0011 10.3 0.1 175 189 83 97 67 114 0.80 # 29538 # 30035 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.645 1_47 - 325 Pox_A32 PF04665.7 241 5e-05 14.5 0.0 1 1 1.8e-06 8.4e-05 13.7 0.0 14 40 154 180 142 215 0.77 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 GTP_EFTU PF00009.22 188 7.9e-06 17.2 0.1 1 1 2.5e-07 1.2e-05 16.7 0.1 2 30 152 180 151 216 0.84 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 RNA_helicase PF00910.17 107 0.00039 12.5 0.0 1 1 1.7e-05 0.00078 11.5 0.0 1 29 156 182 156 213 0.82 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_20 - 242 AAA_24 PF13479.1 213 2.4e-05 15.8 0.0 1 1 7.3e-07 3.4e-05 15.3 0.0 3 56 3 66 1 112 0.71 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_47 - 325 UvrD-helicase PF00580.16 315 5.7e-05 14.3 0.1 1 1 1.8e-06 8.7e-05 13.7 0.1 8 41 148 181 138 194 0.74 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_47 - 325 NACHT PF05729.7 166 1.2e-05 16.8 0.0 1 1 2e-06 4.8e-05 14.9 0.0 2 26 155 179 154 208 0.84 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 1_20 - 242 NACHT PF05729.7 166 0.00027 12.4 0.6 1 1 2.4e-05 0.00056 11.4 0.6 3 25 6 28 5 37 0.82 # 13358 # 14083 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_14 - 255 AAA_25 PF13481.1 194 0.00027 12.2 0.0 1 1 9.5e-06 0.00045 11.5 0.0 42 150 11 122 2 128 0.70 # 8494 # 9258 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_18 - 218 Ribosomal_L4 PF00573.17 192 0.00018 12.8 3.9 1 1 6.5e-06 0.00031 12.0 3.9 14 111 86 189 75 209 0.80 # 12062 # 12715 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.694 1_47 - 325 AAA_28 PF13521.1 163 5.8e-05 14.9 0.0 1 1 2e-06 9.2e-05 14.3 0.0 2 20 156 174 155 210 0.84 # 42599 # 43573 # -1 # ID=1_47;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.618 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/51ed5a5d-6690-4a0f-bb37-69088808679e # Target file: checkm_output/bins/pGCA_000203915.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000203915.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/51ed5a5d-6690-4a0f-bb37-69088808679e checkm_output/bins/pGCA_000203915.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:10 2020 # [ok]