# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_8 - 577 Mg_chelatase PF01078.16 207 8e-05 13.5 0.6 1 2 9.9e-05 0.0042 7.9 0.0 22 65 12 55 8 69 0.81 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Mg_chelatase PF01078.16 207 8e-05 13.5 0.6 2 2 0.0057 0.24 2.2 0.0 25 51 328 354 320 366 0.78 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_24 - 206 Seryl_tRNA_N PF02403.17 108 0.00049 11.8 6.9 1 1 4.8e-06 0.0002 13.1 4.5 37 90 29 82 24 98 0.82 # 20895 # 21512 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.416 1_8 - 577 Thymidylate_kin PF02223.12 186 1.7e-05 15.9 0.0 1 2 0.00025 0.01 6.8 0.0 3 50 19 65 17 81 0.76 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Thymidylate_kin PF02223.12 186 1.7e-05 15.9 0.0 2 2 0.00031 0.013 6.5 0.0 5 31 334 361 332 419 0.74 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 IstB_IS21 PF01695.12 178 2.7e-08 25.1 0.2 1 2 2.8e-05 0.00058 11.0 0.0 49 84 14 49 7 57 0.90 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 IstB_IS21 PF01695.12 178 2.7e-08 25.1 0.2 2 2 2.2e-05 0.00046 11.3 0.0 45 83 322 361 312 378 0.81 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_27 - 673 IstB_IS21 PF01695.12 178 0.00029 12.0 0.1 1 1 0.00021 0.0044 8.1 0.0 33 61 252 284 220 302 0.68 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_2 - 267 MipZ PF09140.6 261 2e-13 41.6 0.0 1 2 1.1e-10 2.3e-09 28.3 0.0 2 72 4 73 3 96 0.83 # 2052 # 2852 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_2 - 267 MipZ PF09140.6 261 2e-13 41.6 0.0 2 2 1.5e-05 0.00031 11.5 0.0 73 123 103 153 78 159 0.80 # 2052 # 2852 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_8 - 577 MipZ PF09140.6 261 3.9e-09 27.6 8.3 1 3 5.9e-06 0.00012 12.8 0.0 8 39 19 50 13 71 0.82 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 MipZ PF09140.6 261 3.9e-09 27.6 8.3 2 3 0.017 0.36 1.5 0.0 77 112 116 153 96 163 0.64 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 MipZ PF09140.6 261 3.9e-09 27.6 8.3 3 3 6.2e-05 0.0013 9.5 6.0 3 121 327 462 325 539 0.60 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_2 - 267 YhjQ PF06564.7 244 7.4e-10 30.2 0.0 1 1 5.6e-11 1.2e-09 29.5 0.0 7 151 8 162 3 180 0.79 # 2052 # 2852 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_8 - 577 YhjQ PF06564.7 244 3.7e-06 18.1 0.5 1 2 4.3e-06 9.1e-05 13.5 0.0 10 55 20 65 14 182 0.66 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 YhjQ PF06564.7 244 3.7e-06 18.1 0.5 2 2 0.023 0.48 1.4 0.0 131 191 344 403 332 414 0.74 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 3HCDH_N PF02737.13 180 2.7e-06 18.8 0.6 1 1 1.7e-07 7.1e-06 17.4 0.2 1 56 162 217 162 248 0.86 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 Pyr_redox_2 PF07992.9 201 4.5e-33 106.5 0.7 1 3 1.3e-18 5.5e-17 53.9 0.0 1 134 7 131 7 153 0.83 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 Pyr_redox_2 PF07992.9 201 4.5e-33 106.5 0.7 2 3 4.5e-07 1.9e-05 16.3 0.1 1 85 162 228 162 263 0.56 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 Pyr_redox_2 PF07992.9 201 4.5e-33 106.5 0.7 3 3 1.1e-12 4.8e-11 34.6 0.0 156 199 235 301 206 303 0.75 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_27 - 673 DUF87 PF01935.12 229 1.7e-08 26.2 2.3 1 2 0.017 0.7 1.3 0.7 126 209 113 187 82 199 0.54 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_27 - 673 DUF87 PF01935.12 229 1.7e-08 26.2 2.3 2 2 4.1e-10 1.7e-08 26.2 2.3 16 224 263 482 255 487 0.66 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 577 NB-ARC PF00931.17 287 5e-09 27.0 1.8 1 2 3.5e-05 0.0015 9.1 0.0 21 38 14 31 6 42 0.85 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 NB-ARC PF00931.17 287 5e-09 27.0 1.8 2 2 1.6e-07 6.8e-06 16.7 0.4 6 43 314 349 311 357 0.85 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_22 PF13401.1 131 1e-07 23.9 0.0 1 2 0.0034 0.071 5.0 0.0 7 27 15 35 11 71 0.74 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_22 PF13401.1 131 1e-07 23.9 0.0 2 2 1.4e-06 3e-05 15.9 0.0 3 95 324 445 321 499 0.78 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_27 - 673 AAA_22 PF13401.1 131 4.3e-06 18.6 0.2 1 2 1.8e-05 0.00038 12.3 0.1 8 104 274 369 268 389 0.69 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_27 - 673 AAA_22 PF13401.1 131 4.3e-06 18.6 0.2 2 2 0.013 0.27 3.1 0.0 71 108 485 521 454 550 0.69 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 577 DUF1611 PF07755.6 301 3.5e-05 14.2 1.3 1 2 0.00083 0.035 4.3 0.2 124 156 23 55 18 62 0.92 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 DUF1611 PF07755.6 301 3.5e-05 14.2 1.3 2 2 7.3e-05 0.0031 7.8 0.1 109 151 322 363 292 369 0.83 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 ATP_bind_1 PF03029.12 238 4.8e-06 17.9 4.4 1 2 6.8e-05 0.0029 8.8 0.3 2 37 18 53 17 60 0.94 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 ATP_bind_1 PF03029.12 238 4.8e-06 17.9 4.4 2 2 2.4e-05 0.001 10.3 0.1 2 62 331 393 330 446 0.61 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_23 - 157 tRNA_anti-like PF12869.2 144 7e-06 17.3 0.1 1 1 2.9e-07 1.2e-05 16.5 0.1 6 60 70 139 67 143 0.88 # 20069 # 20539 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.416 1_8 - 577 SRP54 PF00448.17 196 5.7e-09 27.3 13.7 1 4 4.5e-07 1.9e-05 15.9 0.3 3 38 14 49 12 52 0.93 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 SRP54 PF00448.17 196 5.7e-09 27.3 13.7 2 4 0.028 1.2 0.2 0.0 76 92 132 148 111 155 0.83 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 SRP54 PF00448.17 196 5.7e-09 27.3 13.7 3 4 4.5e-06 0.00019 12.6 3.5 2 87 326 411 325 416 0.72 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 SRP54 PF00448.17 196 5.7e-09 27.3 13.7 4 4 0.0068 0.28 2.2 0.3 68 92 422 446 401 467 0.74 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 NAD_binding_7 PF13241.1 103 0.00012 14.1 0.7 1 2 0.022 0.92 1.6 0.0 7 36 5 36 2 140 0.65 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 NAD_binding_7 PF13241.1 103 0.00012 14.1 0.7 2 2 5.1e-05 0.0022 10.0 0.2 8 45 161 217 157 278 0.58 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 AAA_17 PF13207.1 121 1.6e-06 20.6 0.0 1 2 0.0022 0.046 6.3 0.0 3 19 16 32 15 67 0.86 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_17 PF13207.1 121 1.6e-06 20.6 0.0 2 2 6.7e-05 0.0014 11.1 0.0 2 64 327 399 326 483 0.54 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_27 - 673 AAA_17 PF13207.1 121 0.0049 9.4 6.3 1 2 0.00037 0.0079 8.7 1.2 3 15 274 286 274 289 0.89 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_27 - 673 AAA_17 PF13207.1 121 0.0049 9.4 6.3 2 2 0.085 1.8 1.1 0.1 29 97 392 467 382 532 0.59 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 577 MobB PF03205.9 140 1.6e-07 22.8 0.2 1 2 7.8e-05 0.0033 8.8 0.0 3 38 15 49 13 55 0.88 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 MobB PF03205.9 140 1.6e-07 22.8 0.2 2 2 1.1e-05 0.00046 11.6 0.0 2 32 327 357 326 443 0.90 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 ArsA_ATPase PF02374.10 305 1.7e-112 367.0 5.8 1 3 3.2e-75 6.8e-74 240.2 0.0 2 300 13 293 12 297 0.96 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 ArsA_ATPase PF02374.10 305 1.7e-112 367.0 5.8 2 3 3e-30 6.3e-29 92.6 1.3 2 156 326 467 325 480 0.90 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 ArsA_ATPase PF02374.10 305 1.7e-112 367.0 5.8 3 3 1.2e-12 2.6e-11 34.7 0.1 200 273 481 554 458 564 0.87 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_2 - 267 ArsA_ATPase PF02374.10 305 4.4e-13 40.5 0.0 1 1 3.1e-14 6.5e-13 40.0 0.0 3 137 4 139 2 181 0.83 # 2052 # 2852 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_8 - 577 PhoH PF02562.11 205 6.2e-10 30.3 0.5 1 2 2.2e-05 0.00094 10.1 0.0 20 59 13 52 2 70 0.84 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 PhoH PF02562.11 205 6.2e-10 30.3 0.5 2 2 1.3e-07 5.6e-06 17.4 0.2 14 101 319 413 312 423 0.85 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 T2SE PF00437.15 272 4.5e-07 20.7 2.4 1 2 0.00023 0.0097 6.4 0.1 130 162 14 46 7 72 0.78 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 T2SE PF00437.15 272 4.5e-07 20.7 2.4 2 2 1.5e-06 6.5e-05 13.6 0.5 38 159 208 356 190 367 0.67 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Zeta_toxin PF06414.7 201 2e-05 15.4 0.7 1 2 0.0015 0.063 4.0 0.0 20 48 16 46 5 57 0.81 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Zeta_toxin PF06414.7 201 2e-05 15.4 0.7 2 2 5.1e-05 0.0021 8.8 0.0 15 50 324 360 317 400 0.92 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 NAD_binding_8 PF13450.1 68 1.7e-07 22.9 0.2 1 2 0.016 0.69 1.8 0.0 1 26 10 39 10 55 0.66 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 NAD_binding_8 PF13450.1 68 1.7e-07 22.9 0.2 2 2 1.4e-07 6e-06 18.0 0.0 1 31 165 195 165 200 0.96 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 VirC1 PF07015.6 231 7.3e-09 26.7 0.4 1 2 7e-05 0.0015 9.3 0.1 9 48 19 58 12 78 0.86 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 VirC1 PF07015.6 231 7.3e-09 26.7 0.4 2 2 1.1e-06 2.3e-05 15.2 0.0 4 118 327 450 325 532 0.71 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_2 - 267 VirC1 PF07015.6 231 1.9e-07 22.0 0.7 1 1 2.3e-08 4.7e-07 20.7 0.6 3 39 4 40 2 55 0.90 # 2052 # 2852 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_8 - 577 Fer4_NifH PF00142.13 273 6.1e-13 40.2 0.9 1 3 6.6e-09 1.4e-07 22.6 0.0 5 41 17 53 13 69 0.86 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Fer4_NifH PF00142.13 273 6.1e-13 40.2 0.9 2 3 2.9e-06 6.1e-05 13.9 0.1 3 57 328 381 325 408 0.76 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Fer4_NifH PF00142.13 273 6.1e-13 40.2 0.9 3 3 0.051 1.1 0.0 0.0 188 242 459 513 451 531 0.82 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_2 - 267 Fer4_NifH PF00142.13 273 1.6e-07 22.4 0.7 1 1 1.6e-08 3.3e-07 21.4 0.0 8 52 11 55 3 83 0.86 # 2052 # 2852 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_27 - 673 Arch_ATPase PF01637.13 234 0.00019 12.8 7.6 1 1 1.5e-06 6.3e-05 14.4 2.5 20 135 270 392 265 501 0.80 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 577 AAA_16 PF13191.1 185 1.1e-05 17.2 2.8 1 2 0.0004 0.0083 7.8 0.0 25 69 13 52 5 143 0.85 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_16 PF13191.1 185 1.1e-05 17.2 2.8 2 2 0.00046 0.0096 7.6 0.9 26 70 327 378 313 494 0.57 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_27 - 673 AAA_16 PF13191.1 185 0.00012 13.8 0.2 1 2 0.00062 0.013 7.1 0.0 25 50 271 297 259 385 0.78 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_27 - 673 AAA_16 PF13191.1 185 0.00012 13.8 0.2 2 2 0.0057 0.12 4.0 0.0 114 162 466 511 401 529 0.74 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 577 AAA_18 PF13238.1 129 8.2e-07 21.1 0.0 1 2 0.00043 0.018 7.0 0.0 2 22 16 36 15 68 0.75 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_18 PF13238.1 129 8.2e-07 21.1 0.0 2 2 2.3e-05 0.00096 11.2 0.0 4 80 331 445 328 455 0.57 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_2 - 267 CbiA PF01656.18 195 1.8e-31 100.7 0.0 1 1 1.1e-32 2.3e-31 100.4 0.0 1 193 5 232 5 234 0.79 # 2052 # 2852 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_8 - 577 CbiA PF01656.18 195 1.2e-27 88.2 1.5 1 2 7.2e-17 1.5e-15 48.8 0.1 4 165 17 248 14 278 0.75 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 CbiA PF01656.18 195 1.2e-27 88.2 1.5 2 2 9.6e-14 2e-12 38.6 0.2 1 115 327 470 327 519 0.69 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 KaiC PF06745.8 227 0.0001 13.1 2.9 1 2 0.00014 0.0059 7.4 0.1 24 59 17 51 10 63 0.86 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 KaiC PF06745.8 227 0.0001 13.1 2.9 2 2 0.00064 0.027 5.2 0.7 7 62 312 366 309 492 0.72 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_14 PF13173.1 128 5.9e-06 17.9 0.0 1 2 0.0074 0.16 3.6 0.0 6 44 16 55 12 77 0.75 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_14 PF13173.1 128 5.9e-06 17.9 0.0 2 2 4.7e-05 0.00098 10.7 0.0 2 80 325 395 324 412 0.70 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_27 - 673 AAA_14 PF13173.1 128 2.1e-05 16.1 6.8 1 3 4.3e-06 9.1e-05 14.1 0.3 3 82 271 372 269 385 0.69 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_27 - 673 AAA_14 PF13173.1 128 2.1e-05 16.1 6.8 2 3 0.06 1.3 0.7 0.0 92 123 442 472 407 477 0.76 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_27 - 673 AAA_14 PF13173.1 128 2.1e-05 16.1 6.8 3 3 0.011 0.24 3.0 0.1 32 91 463 529 451 556 0.56 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_12 - 467 HI0933_like PF03486.9 409 4.3e-06 17.0 0.5 1 4 0.0018 0.076 3.0 0.0 2 28 7 35 6 43 0.77 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 HI0933_like PF03486.9 409 4.3e-06 17.0 0.5 2 4 0.00038 0.016 5.2 0.0 116 170 68 121 63 156 0.77 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 HI0933_like PF03486.9 409 4.3e-06 17.0 0.5 3 4 0.00056 0.023 4.7 0.0 2 36 162 196 161 201 0.92 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 HI0933_like PF03486.9 409 4.3e-06 17.0 0.5 4 4 0.081 3.4 -2.4 0.0 113 154 205 246 198 258 0.71 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 AAA_29 PF13555.1 62 9.9e-05 13.6 0.9 1 2 0.00025 0.011 7.1 0.0 25 44 14 33 3 44 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_29 PF13555.1 62 9.9e-05 13.6 0.9 2 2 0.0019 0.082 4.2 0.1 21 50 323 352 312 361 0.73 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA PF00004.24 132 5.1e-07 21.7 1.2 1 2 7.3e-05 0.0031 9.4 0.1 2 22 16 36 15 76 0.73 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA PF00004.24 132 5.1e-07 21.7 1.2 2 2 6.1e-05 0.0026 9.7 0.2 4 50 331 403 328 499 0.75 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_27 - 673 TK PF00265.13 176 0.0002 12.6 3.0 1 2 9.1e-06 0.00038 11.7 0.0 4 42 273 311 270 368 0.78 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_27 - 673 TK PF00265.13 176 0.0002 12.6 3.0 2 2 0.041 1.7 -0.2 0.1 57 89 480 512 466 524 0.61 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_12 - 467 Pyr_redox_3 PF13738.1 203 9.6e-11 33.7 0.2 1 3 0.038 1.6 0.4 0.0 168 188 6 26 2 41 0.77 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 Pyr_redox_3 PF13738.1 203 9.6e-11 33.7 0.2 2 3 1.6e-10 6.6e-09 27.7 0.0 96 198 75 191 51 196 0.68 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 Pyr_redox_3 PF13738.1 203 9.6e-11 33.7 0.2 3 3 0.016 0.68 1.6 0.0 95 147 214 269 198 299 0.67 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 DUF258 PF03193.11 161 6.5e-06 17.1 0.3 1 3 0.0068 0.14 3.0 0.3 36 52 13 29 4 44 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 DUF258 PF03193.11 161 6.5e-06 17.1 0.3 2 3 0.047 0.99 0.2 0.0 5 45 33 74 29 75 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 DUF258 PF03193.11 161 6.5e-06 17.1 0.3 3 3 5.6e-05 0.0012 9.7 0.0 33 66 323 356 298 374 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_27 - 673 DUF258 PF03193.11 161 0.00035 11.4 0.0 1 1 4.3e-05 0.00089 10.1 0.0 34 51 269 286 250 302 0.78 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_22 - 504 TraG-D_C PF12696.2 128 1.6e-43 139.4 0.1 1 1 2.3e-44 4.8e-43 137.8 0.0 2 128 282 405 281 405 0.91 # 18556 # 20067 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_27 - 673 TraG-D_C PF12696.2 128 3.4e-05 15.4 0.2 1 1 1.1e-05 0.00023 12.8 0.2 15 100 518 609 502 662 0.61 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_12 - 467 NAD_binding_2 PF03446.10 163 0.00018 13.1 0.1 1 1 7.5e-06 0.00032 12.3 0.1 2 40 161 199 160 258 0.83 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_2 - 267 AAA_31 PF13614.1 157 2.5e-13 41.9 0.1 1 1 2.5e-14 5.2e-13 40.9 0.1 2 151 4 161 3 166 0.85 # 2052 # 2852 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_8 - 577 AAA_31 PF13614.1 157 1.8e-10 32.7 0.3 1 4 7e-07 1.5e-05 16.7 0.0 5 45 16 56 13 67 0.87 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_31 PF13614.1 157 1.8e-10 32.7 0.3 2 4 0.0056 0.12 4.0 0.0 105 129 125 151 114 163 0.76 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_31 PF13614.1 157 1.8e-10 32.7 0.3 3 4 0.0022 0.046 5.3 0.0 8 32 332 356 325 445 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_31 PF13614.1 157 1.8e-10 32.7 0.3 4 4 0.054 1.1 0.8 0.0 20 53 428 461 422 492 0.77 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 NTPase_1 PF03266.10 168 0.0002 12.8 8.7 1 2 5.7e-05 0.0024 9.3 0.1 2 30 15 43 14 50 0.86 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 NTPase_1 PF03266.10 168 0.0002 12.8 8.7 2 2 0.00029 0.012 7.0 1.5 3 29 329 355 326 361 0.84 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_33 PF13671.1 143 5e-06 18.1 0.8 1 2 0.0034 0.14 3.7 0.0 3 34 16 52 15 83 0.71 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_33 PF13671.1 143 5e-06 18.1 0.8 2 2 9.1e-06 0.00038 12.0 0.1 2 78 328 445 327 500 0.64 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 KTI12 PF08433.5 270 1.2e-05 16.2 0.0 1 2 0.0007 0.03 5.2 0.0 5 45 16 56 14 67 0.84 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 KTI12 PF08433.5 270 1.2e-05 16.2 0.0 2 2 9.7e-05 0.0041 8.0 0.0 6 38 330 362 326 405 0.87 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 NAD_Gly3P_dh_N PF01210.18 157 0.00019 12.8 0.0 1 1 1.2e-05 0.0005 11.5 0.0 1 35 162 196 162 260 0.83 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 2-Hacid_dh_C PF02826.14 178 0.0001 13.2 0.3 1 2 6.4e-05 0.0027 8.5 0.1 36 68 160 192 124 244 0.86 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 2-Hacid_dh_C PF02826.14 178 0.0001 13.2 0.3 2 2 0.0065 0.27 2.0 0.0 26 60 389 423 371 434 0.84 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 AAA_30 PF13604.1 196 4.8e-05 14.7 8.5 1 2 0.00011 0.0044 8.3 0.1 21 54 15 48 9 62 0.87 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_30 PF13604.1 196 4.8e-05 14.7 8.5 2 2 4.5e-05 0.0019 9.5 1.5 10 56 317 363 314 446 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 ApbA PF02558.11 151 0.00023 12.3 1.0 1 2 0.014 0.59 1.2 0.0 24 76 60 116 54 142 0.83 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 ApbA PF02558.11 151 0.00023 12.3 1.0 2 2 0.00017 0.0071 7.5 0.5 1 72 163 254 163 269 0.64 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_27 - 673 FtsK_SpoIIIE PF01580.13 205 1.5e-05 16.2 0.0 1 1 9.2e-07 3.8e-05 14.9 0.0 40 80 272 308 251 322 0.78 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_12 - 467 Lycopene_cycl PF05834.7 374 0.00012 12.7 0.1 1 2 0.00035 0.015 5.8 0.0 2 33 8 39 7 45 0.87 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 Lycopene_cycl PF05834.7 374 0.00012 12.7 0.1 2 2 0.00077 0.032 4.7 0.0 2 36 163 195 162 249 0.90 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 ABC_tran PF00005.22 137 1.4e-06 20.4 0.7 1 2 0.0011 0.045 5.8 0.1 14 51 15 52 8 217 0.69 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 ABC_tran PF00005.22 137 1.4e-06 20.4 0.7 2 2 1.2e-05 0.00052 12.0 0.1 12 71 326 389 320 563 0.84 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 K_oxygenase PF13434.1 341 3.7e-07 21.0 0.1 1 2 3.2e-08 1.3e-06 19.1 0.0 122 234 88 202 65 223 0.72 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 K_oxygenase PF13434.1 341 3.7e-07 21.0 0.1 2 2 0.043 1.8 -1.0 0.0 290 336 212 256 197 260 0.71 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 UDPG_MGDP_dh_N PF03721.9 185 5e-06 17.7 0.2 1 1 2.3e-07 9.5e-06 16.8 0.2 2 52 162 212 161 258 0.87 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 RuvB_N PF05496.7 234 5.6e-06 17.2 0.4 1 2 0.00082 0.034 4.8 0.0 48 74 9 36 2 64 0.77 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 RuvB_N PF05496.7 234 5.6e-06 17.2 0.4 2 2 2.4e-05 0.001 9.8 0.1 53 133 328 411 318 438 0.77 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_19 PF13245.1 76 2.9e-07 21.9 4.5 1 3 3.4e-06 0.00014 13.3 0.1 12 50 15 48 8 58 0.87 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_19 PF13245.1 76 2.9e-07 21.9 4.5 2 3 0.00019 0.0081 7.7 0.2 17 49 332 360 317 367 0.81 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_19 PF13245.1 76 2.9e-07 21.9 4.5 3 3 0.088 3.7 -0.8 0.0 11 50 439 457 427 476 0.56 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 NAD_binding_10 PF13460.1 183 6e-05 14.8 0.4 1 1 6.6e-06 0.00028 12.6 0.1 1 36 163 197 163 222 0.83 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 Helicase_RecD PF05127.9 177 4.3e-05 14.9 5.6 1 3 0.00044 0.018 6.3 0.1 3 47 18 62 16 74 0.87 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Helicase_RecD PF05127.9 177 4.3e-05 14.9 5.6 2 3 0.027 1.2 0.5 0.1 14 58 190 243 182 282 0.61 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Helicase_RecD PF05127.9 177 4.3e-05 14.9 5.6 3 3 6.7e-05 0.0028 9.0 0.2 5 99 333 446 329 467 0.67 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_27 - 673 AAA_10 PF12846.2 304 3.3e-55 179.3 0.7 1 1 4.7e-56 6.5e-55 178.3 0.7 1 294 270 579 270 587 0.87 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_22 - 504 AAA_10 PF12846.2 304 5.8e-16 50.4 0.1 1 1 5.3e-17 7.5e-16 50.0 0.1 1 302 23 362 23 364 0.73 # 18556 # 20067 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_8 - 577 AAA_10 PF12846.2 304 1.4e-05 16.3 0.2 1 2 1.9e-05 0.00026 12.1 0.0 3 56 14 70 12 148 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_10 PF12846.2 304 1.4e-05 16.3 0.2 2 2 0.03 0.42 1.6 0.1 4 34 328 358 325 373 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 DAO PF01266.19 358 9.1e-10 29.5 2.0 1 3 0.0094 0.4 1.1 0.0 2 31 8 39 7 55 0.86 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 DAO PF01266.19 358 9.1e-10 29.5 2.0 2 3 6e-06 0.00025 11.6 0.0 143 205 56 121 36 153 0.78 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 DAO PF01266.19 358 9.1e-10 29.5 2.0 3 3 8.1e-07 3.4e-05 14.5 0.2 1 35 162 197 162 223 0.84 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 ResIII PF04851.10 184 0.0063 8.0 5.7 1 2 0.0058 0.25 2.8 0.0 30 59 17 48 6 62 0.82 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 ResIII PF04851.10 184 0.0063 8.0 5.7 2 2 0.00067 0.028 5.9 1.0 23 57 322 359 275 367 0.79 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Zot PF05707.7 193 0.00027 12.1 0.2 1 2 0.0086 0.36 1.9 0.1 4 20 16 32 14 47 0.77 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 Zot PF05707.7 193 0.00027 12.1 0.2 2 2 0.00016 0.0068 7.5 0.0 2 26 327 350 326 394 0.83 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 DUF2075 PF09848.4 352 0.00096 9.8 9.2 1 2 0.00096 0.04 4.5 0.1 3 54 14 65 12 87 0.76 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 DUF2075 PF09848.4 352 0.00096 9.8 9.2 2 2 0.00053 0.022 5.3 4.0 1 40 325 362 325 463 0.54 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 TIP49 PF06068.8 398 0.00023 11.5 0.9 1 2 0.077 3.2 -2.1 0.0 53 77 15 39 8 51 0.77 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 TIP49 PF06068.8 398 0.00023 11.5 0.9 2 2 1.1e-05 0.00047 10.5 0.1 37 84 315 359 312 363 0.87 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 NAD_binding_9 PF13454.1 156 0.0044 8.5 4.5 1 4 0.051 2.2 -0.3 0.0 2 36 10 43 9 66 0.78 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 NAD_binding_9 PF13454.1 156 0.0044 8.5 4.5 2 4 0.011 0.47 1.9 0.1 126 155 86 117 64 118 0.70 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 NAD_binding_9 PF13454.1 156 0.0044 8.5 4.5 3 4 0.00081 0.034 5.6 0.0 1 33 164 191 164 200 0.85 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 NAD_binding_9 PF13454.1 156 0.0044 8.5 4.5 4 4 0.095 4 -1.1 0.2 116 154 215 258 204 260 0.68 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 PduV-EutP PF10662.4 143 9e-05 13.7 1.1 1 2 0.054 2.3 -0.6 0.0 4 18 15 29 13 39 0.85 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 PduV-EutP PF10662.4 143 9e-05 13.7 1.1 2 2 9e-06 0.00038 11.7 0.2 2 37 326 361 324 368 0.85 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 Pyr_redox PF00070.22 80 1.3e-23 75.0 2.8 1 3 0.0014 0.059 5.6 0.0 1 24 7 32 7 42 0.82 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 Pyr_redox PF00070.22 80 1.3e-23 75.0 2.8 2 3 0.049 2.1 0.6 0.0 48 72 69 93 61 101 0.79 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_12 - 467 Pyr_redox PF00070.22 80 1.3e-23 75.0 2.8 3 3 3.8e-22 1.6e-20 65.1 1.4 1 76 162 238 162 244 0.94 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_22 - 504 TrwB_AAD_bind PF10412.4 386 2.2e-36 116.9 0.0 1 1 1.4e-36 3e-35 113.1 0.0 13 381 21 419 14 423 0.74 # 18556 # 20067 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_27 - 673 TrwB_AAD_bind PF10412.4 386 2.8e-07 21.1 0.1 1 2 3.2e-05 0.00067 9.9 0.0 12 56 267 311 257 317 0.74 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_27 - 673 TrwB_AAD_bind PF10412.4 386 2.8e-07 21.1 0.1 2 2 8.3e-05 0.0017 8.6 0.0 237 311 493 574 478 663 0.84 # 24093 # 26111 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.412 1_8 - 577 ParA PF10609.4 81 0.00062 11.4 3.9 1 2 9.2e-05 0.0039 8.8 0.0 21 63 192 240 181 257 0.68 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 ParA PF10609.4 81 0.00062 11.4 3.9 2 2 0.022 0.9 1.2 0.0 13 45 470 508 468 539 0.72 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_22 - 504 T4SS-DNA_transf PF02534.9 469 3.7e-133 436.1 4.7 1 2 8.7e-135 3.7e-133 436.1 4.7 45 455 24 439 5 467 0.94 # 18556 # 20067 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_22 - 504 T4SS-DNA_transf PF02534.9 469 3.7e-133 436.1 4.7 2 2 0.029 1.2 -0.8 0.2 160 206 451 499 432 502 0.72 # 18556 # 20067 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_8 - 577 ArgK PF03308.11 267 2.7e-09 27.8 0.1 1 2 2.7e-08 1.1e-06 19.2 0.0 29 71 12 54 3 56 0.91 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 ArgK PF03308.11 267 2.7e-09 27.8 0.1 2 2 0.00029 0.012 6.0 0.0 31 68 327 364 307 368 0.85 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 PIF1 PF05970.9 364 6.1e-08 23.6 0.1 1 2 0.00041 0.017 5.6 0.0 19 56 9 46 4 57 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 PIF1 PF05970.9 364 6.1e-08 23.6 0.1 2 2 4.4e-07 1.8e-05 15.4 0.0 10 56 313 358 308 405 0.87 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 RNA_helicase PF00910.17 107 3.3e-05 15.8 0.0 1 2 0.0018 0.076 5.0 0.0 2 24 16 38 15 61 0.78 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 RNA_helicase PF00910.17 107 3.3e-05 15.8 0.0 2 2 0.00017 0.0073 8.2 0.0 1 27 328 354 328 404 0.74 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_12 - 467 TrkA_N PF02254.13 116 9.9e-06 17.3 0.5 1 1 1.8e-06 7.5e-05 14.4 0.2 1 50 163 212 163 228 0.89 # 10272 # 11672 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.408 1_8 - 577 AAA_24 PF13479.1 213 0.0001 13.6 6.5 1 3 0.0017 0.073 4.3 0.1 9 22 18 31 12 57 0.87 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_24 PF13479.1 213 0.0001 13.6 6.5 2 3 0.0079 0.33 2.1 0.0 41 77 113 148 103 159 0.84 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_24 PF13479.1 213 0.0001 13.6 6.5 3 3 0.00052 0.022 6.0 2.8 7 77 329 446 323 496 0.56 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 NACHT PF05729.7 166 0.00086 10.7 6.3 1 3 0.0027 0.11 3.8 0.1 2 25 14 37 13 47 0.79 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 NACHT PF05729.7 166 0.00086 10.7 6.3 2 3 0.00035 0.015 6.6 0.7 3 28 328 353 326 361 0.84 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 NACHT PF05729.7 166 0.00086 10.7 6.3 3 3 0.035 1.5 0.2 0.0 53 97 410 465 380 506 0.64 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_25 PF13481.1 194 7.9e-12 36.6 1.2 1 2 6e-06 0.00025 12.1 0.1 36 63 15 43 9 68 0.80 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 AAA_25 PF13481.1 194 7.9e-12 36.6 1.2 2 2 3.3e-09 1.4e-07 22.8 0.1 16 153 307 448 298 491 0.71 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_36 - 196 AAA_5 PF07728.9 139 0.00012 13.6 0.1 1 1 3.9e-06 0.00016 13.1 0.1 58 123 47 116 14 133 0.79 # 31870 # 32457 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.434 1_8 - 577 APS_kinase PF01583.15 157 1.3e-07 23.1 1.4 1 2 2e-05 0.00082 10.7 0.1 4 39 14 49 12 65 0.90 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 1_8 - 577 APS_kinase PF01583.15 157 1.3e-07 23.1 1.4 2 2 2.1e-05 0.00088 10.6 0.1 4 35 327 358 324 366 0.86 # 6496 # 8226 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/671cec9f-45be-4f26-8846-8cbb55a11460 # Target file: checkm_output/bins/pGCA_000203855.3.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000203855.3.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/671cec9f-45be-4f26-8846-8cbb55a11460 checkm_output/bins/pGCA_000203855.3.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:40:09 2020 # [ok]