# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 563 UPF0079 PF02367.12 123 5.1e-06 12.6 0.2 1 2 0.0091 0.0091 2.1 0.0 70 100 238 268 227 283 0.79 # 78 # 1766 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=TAAAA;rbs_spacer=15bp;gc_cont=0.367 1_1 - 563 UPF0079 PF02367.12 123 5.1e-06 12.6 0.2 2 2 0.00015 0.00015 7.8 0.1 58 101 312 357 304 375 0.78 # 78 # 1766 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=TAAAA;rbs_spacer=15bp;gc_cont=0.367 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/40d53cb6-cf52-48e9-b850-2c2a76356745 # Target file: checkm_output/bins/pGCA_000185205.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000185205.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/40d53cb6-cf52-48e9-b850-2c2a76356745 checkm_output/bins/pGCA_000185205.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:39:50 2020 # [ok]