# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_13 - 206 Seryl_tRNA_N PF02403.17 108 0.00036 13.4 4.8 1 1 7.9e-06 0.00075 12.4 4.8 37 90 29 82 24 97 0.77 # 10934 # 11551 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.416 5_1 - 450 Saccharop_dh PF03435.13 386 0.00055 11.7 0.0 1 2 2.7e-05 0.0026 9.6 0.0 2 33 7 36 7 39 0.90 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 Saccharop_dh PF03435.13 386 0.00055 11.7 0.0 2 2 0.033 3.2 -0.6 0.0 2 38 163 197 162 213 0.82 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_16 - 253 IstB_IS21 PF01695.12 178 2.1e-49 160.1 0.5 1 1 5.9e-51 2.8e-49 159.7 0.1 2 177 54 232 53 233 0.95 # 14190 # 14948 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.491 2_16 - 672 IstB_IS21 PF01695.12 178 0.00054 12.2 0.1 1 1 0.00019 0.009 8.3 0.0 33 61 251 283 219 304 0.67 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 1_1 - 270 MipZ PF09140.6 261 1.5e-09 30.1 0.1 1 2 3.2e-08 3.1e-06 19.3 0.0 3 46 5 47 3 82 0.80 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_1 - 270 MipZ PF09140.6 261 1.5e-09 30.1 0.1 2 2 6e-05 0.0057 8.5 0.0 79 125 108 154 95 159 0.84 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_1 - 270 YhjQ PF06564.7 244 4.1e-15 48.6 0.0 1 1 5.6e-17 5.3e-15 48.2 0.0 2 150 3 160 1 188 0.84 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 5_1 - 450 3HCDH_N PF02737.13 180 3.5e-08 26.1 0.0 1 2 0.00031 0.029 6.8 0.0 4 34 8 38 5 46 0.93 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 3HCDH_N PF02737.13 180 3.5e-08 26.1 0.0 2 2 2.2e-07 2e-05 17.1 0.0 2 49 162 209 161 250 0.83 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 GIDA PF01134.17 392 3.5e-06 18.8 0.1 1 3 4e-06 0.00038 12.2 0.0 3 48 7 58 5 88 0.84 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 GIDA PF01134.17 392 3.5e-06 18.8 0.1 2 3 0.0022 0.21 3.2 0.0 3 33 163 193 161 206 0.90 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 GIDA PF01134.17 392 3.5e-06 18.8 0.1 3 3 0.074 7.1 -1.9 0.0 343 366 278 300 215 302 0.60 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 Pyr_redox_2 PF07992.9 201 2.8e-38 124.6 1.6 1 1 1.6e-38 1.5e-36 119.0 1.6 3 200 7 302 5 303 0.94 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_16 - 672 DUF87 PF01935.12 229 3.1e-09 29.8 2.6 1 2 0.032 3 0.4 0.4 128 198 114 180 79 198 0.51 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_16 - 672 DUF87 PF01935.12 229 3.1e-09 29.8 2.6 2 2 3.3e-11 3.1e-09 29.8 2.6 16 224 262 481 254 506 0.75 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 1_31 - 313 NB-ARC PF00931.17 287 0.00017 13.3 0.1 1 1 3.2e-06 0.00031 12.5 0.1 6 41 16 51 11 59 0.87 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 AAA_22 PF13401.1 131 2.1e-06 20.8 0.0 1 1 2.2e-07 1e-05 18.5 0.0 4 123 29 195 25 202 0.73 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_16 - 672 AAA_22 PF13401.1 131 6.3e-06 19.2 0.2 1 2 1.2e-05 0.00057 12.9 0.1 8 104 273 368 267 388 0.70 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_16 - 672 AAA_22 PF13401.1 131 6.3e-06 19.2 0.2 2 2 0.013 0.6 3.1 0.0 71 108 484 520 453 549 0.69 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 1_31 - 313 AAA_15 PF13175.1 415 1.6e-06 20.2 0.0 1 2 0.0002 0.019 6.8 0.0 25 43 25 50 3 74 0.69 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 AAA_15 PF13175.1 415 1.6e-06 20.2 0.0 2 2 7.2e-06 0.00069 11.5 0.0 371 411 157 197 146 199 0.91 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_1 - 450 NAD_binding_7 PF13241.1 103 5.5e-06 19.5 0.0 1 2 0.001 0.098 5.8 0.0 6 39 2 35 1 116 0.82 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 NAD_binding_7 PF13241.1 103 5.5e-06 19.5 0.0 2 2 2.2e-05 0.0021 11.2 0.0 7 45 159 222 153 274 0.64 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_31 - 313 AAA_17 PF13207.1 121 0.00026 14.7 0.0 1 1 1.1e-05 0.00054 13.6 0.0 3 20 33 50 31 99 0.85 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_16 - 672 AAA_17 PF13207.1 121 0.0045 10.7 5.8 1 2 0.00035 0.017 8.8 1.2 3 15 273 285 273 304 0.93 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_16 - 672 AAA_17 PF13207.1 121 0.0045 10.7 5.8 2 2 0.047 2.3 2.0 0.1 27 97 389 466 377 534 0.64 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 1_31 - 313 AAA_21 PF13304.1 303 5.2e-14 45.6 0.0 1 2 1.4e-05 0.00068 12.4 0.0 2 24 32 54 31 81 0.79 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 AAA_21 PF13304.1 303 5.2e-14 45.6 0.0 2 2 2.7e-11 1.3e-09 31.2 0.0 234 298 135 197 113 203 0.91 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_25 - 227 AAA_21 PF13304.1 303 0.00018 14.4 0.2 1 1 6.2e-06 0.00029 13.6 0.0 3 77 9 83 7 118 0.85 # 21378 # 22058 # -1 # ID=2_25;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_31 - 313 MobB PF03205.9 140 0.00032 13.2 0.1 1 1 6.4e-06 0.0006 12.4 0.1 3 25 32 53 30 65 0.83 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_1 - 270 ArsA_ATPase PF02374.10 305 2.8e-11 35.8 0.1 1 2 1e-12 9.8e-11 34.0 0.0 9 137 11 138 5 142 0.80 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_1 - 270 ArsA_ATPase PF02374.10 305 2.8e-11 35.8 0.1 2 2 0.053 5 -1.2 0.0 94 235 152 178 140 227 0.65 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_16 - 253 PhoH PF02562.11 205 0.00011 14.3 0.3 1 1 3.5e-06 0.00033 12.7 0.0 15 46 96 127 88 142 0.85 # 14190 # 14948 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.491 1_31 - 313 T2SE PF00437.15 272 8.5e-05 14.3 0.0 1 1 1.8e-06 0.00017 13.4 0.0 117 154 18 55 3 66 0.78 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 G-alpha PF00503.15 389 5.2e-05 14.8 0.0 1 1 7.7e-07 7.3e-05 14.3 0.0 62 86 33 57 22 86 0.90 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_25 - 227 Zeta_toxin PF06414.7 201 1.9e-16 52.6 0.3 1 1 3.3e-17 1.6e-15 49.6 0.3 15 192 4 164 2 174 0.85 # 21378 # 22058 # -1 # ID=2_25;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_31 - 313 Zeta_toxin PF06414.7 201 8.9e-05 14.5 0.0 1 1 3.3e-06 0.00016 13.6 0.0 17 46 30 60 20 66 0.84 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_1 - 450 NAD_binding_8 PF13450.1 68 7.4e-08 25.2 0.3 1 2 2.8e-05 0.0027 10.6 0.0 1 30 8 37 8 46 0.87 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 NAD_binding_8 PF13450.1 68 7.4e-08 25.2 0.3 2 2 1.1e-05 0.001 11.9 0.0 1 31 164 194 164 195 0.97 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 F420_oxidored PF03807.12 96 1.5e-05 18.2 0.1 1 2 1.5e-05 0.0014 11.9 0.0 4 36 8 36 5 42 0.88 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 F420_oxidored PF03807.12 96 1.5e-05 18.2 0.1 2 2 0.0068 0.64 3.4 0.0 1 30 161 187 161 236 0.79 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 FAD_binding_3 PF01494.14 356 1.9e-05 16.7 0.2 1 3 0.00037 0.035 5.9 0.0 5 35 7 37 3 42 0.89 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 FAD_binding_3 PF01494.14 356 1.9e-05 16.7 0.2 2 3 0.00052 0.05 5.4 0.0 5 35 163 193 161 205 0.92 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 FAD_binding_3 PF01494.14 356 1.9e-05 16.7 0.2 3 3 0.008 0.76 1.5 0.1 118 162 207 251 199 256 0.84 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_31 - 313 SMC_N PF02463.14 220 2.9e-05 16.2 0.0 1 2 0.0024 0.22 3.5 0.0 25 42 30 47 5 54 0.76 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 SMC_N PF02463.14 220 2.9e-05 16.2 0.0 2 2 1.5e-05 0.0014 10.7 0.0 136 206 137 203 78 215 0.80 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_1 - 270 VirC1 PF07015.6 231 0.0004 12.3 0.6 1 1 7e-06 0.00067 11.6 0.1 3 45 4 46 2 70 0.86 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_1 - 270 Fer4_NifH PF00142.13 273 7.4e-09 27.9 0.6 1 2 1.2e-09 1.1e-07 24.1 0.1 8 59 11 63 7 78 0.87 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_1 - 270 Fer4_NifH PF00142.13 273 7.4e-09 27.9 0.6 2 2 0.0051 0.48 2.3 0.1 142 247 150 263 119 268 0.72 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 2_16 - 672 Arch_ATPase PF01637.13 234 0.00015 14.3 7.7 1 1 5.9e-07 5.6e-05 15.7 3.0 20 135 269 391 262 500 0.81 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 1_31 - 313 AAA_16 PF13191.1 185 2.9e-08 26.7 0.7 1 1 2e-09 9.6e-08 25.0 0.1 23 179 28 189 20 194 0.73 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_16 - 672 AAA_16 PF13191.1 185 0.00025 13.9 0.1 1 2 0.00055 0.026 7.3 0.0 25 51 270 297 258 384 0.77 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_16 - 672 AAA_16 PF13191.1 185 0.00025 13.9 0.1 2 2 0.006 0.29 3.9 0.0 115 162 466 510 400 529 0.76 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_25 - 227 AAA_23 PF13476.1 202 0.00015 15.0 3.2 1 1 6.3e-06 0.0003 14.0 3.2 21 132 7 187 3 222 0.57 # 21378 # 22058 # -1 # ID=2_25;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_31 - 313 AAA_23 PF13476.1 202 0.00033 13.8 0.0 1 1 1.2e-05 0.00055 13.1 0.0 20 39 30 49 16 53 0.81 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 AAA_18 PF13238.1 129 8.4e-05 15.7 0.0 1 1 1.9e-06 0.00018 14.6 0.0 3 39 34 85 33 120 0.81 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_38 - 144 adh_short PF00106.20 167 4.5e-05 16.3 0.4 1 1 5.8e-07 5.5e-05 15.9 0.4 11 115 22 128 16 134 0.87 # 37673 # 38104 # -1 # ID=1_38;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_1 - 270 CbiA PF01656.18 195 1.2e-30 99.2 0.1 1 1 1.6e-32 1.5e-30 98.9 0.1 2 184 6 221 5 234 0.77 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 2_16 - 672 AAA_14 PF13173.1 128 1.3e-05 18.0 6.7 1 3 5.6e-07 5.4e-05 16.0 0.4 3 82 270 371 268 382 0.71 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_16 - 672 AAA_14 PF13173.1 128 1.3e-05 18.0 6.7 2 3 0.032 3.1 0.6 0.0 92 123 441 471 406 477 0.78 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_16 - 672 AAA_14 PF13173.1 128 1.3e-05 18.0 6.7 3 3 0.004 0.38 3.5 0.1 31 89 461 526 442 563 0.57 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 5_1 - 450 HI0933_like PF03486.9 409 8.2e-08 23.8 0.1 1 3 0.00012 0.0057 7.9 0.0 2 35 5 38 4 42 0.93 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 HI0933_like PF03486.9 409 8.2e-08 23.8 0.1 2 3 0.00084 0.04 5.1 0.0 2 36 161 195 160 197 0.91 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 HI0933_like PF03486.9 409 8.2e-08 23.8 0.1 3 3 0.00018 0.0085 7.3 0.0 111 164 202 257 196 284 0.79 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_30 - 228 HI0933_like PF03486.9 409 0.00059 11.1 0.0 1 1 2.1e-05 0.00098 10.4 0.0 287 363 125 199 86 211 0.74 # 30219 # 30902 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_31 - 313 AAA_29 PF13555.1 62 1.5e-05 17.4 0.1 1 1 7.5e-07 3.5e-05 16.1 0.1 17 51 24 57 18 64 0.77 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_25 - 227 AAA_29 PF13555.1 62 2.4e-05 16.7 0.0 1 1 1.1e-06 5.2e-05 15.6 0.0 26 47 8 29 2 38 0.80 # 21378 # 22058 # -1 # ID=2_25;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_31 - 313 AAA PF00004.24 132 0.00095 12.2 0.3 1 1 8.5e-05 0.0081 9.2 0.3 2 23 33 54 32 204 0.65 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_16 - 253 Bac_DnaA PF00308.13 219 1.5e-06 20.8 0.0 1 1 2.9e-08 2.7e-06 20.0 0.0 32 121 98 186 79 211 0.73 # 14190 # 14948 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.491 2_16 - 672 TK PF00265.13 176 0.00021 13.7 3.2 1 3 0.073 7 -1.0 0.2 35 77 96 139 86 185 0.70 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_16 - 672 TK PF00265.13 176 0.00021 13.7 3.2 2 3 4.8e-06 0.00046 12.6 0.0 4 42 272 310 269 368 0.79 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_16 - 672 TK PF00265.13 176 0.00021 13.7 3.2 3 3 0.041 3.9 -0.2 0.1 57 89 479 511 465 523 0.61 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 5_1 - 450 Thi4 PF01946.12 230 3.1e-05 16.0 0.0 1 2 2.3e-06 0.00022 13.2 0.0 21 57 7 43 3 63 0.88 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 Thi4 PF01946.12 230 3.1e-05 16.0 0.0 2 2 0.045 4.2 -0.8 0.0 20 49 162 191 146 194 0.85 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 Pyr_redox_3 PF13738.1 203 2.1e-12 40.3 0.0 1 2 7.2e-11 6.9e-09 28.9 0.0 1 198 7 190 7 195 0.75 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 Pyr_redox_3 PF13738.1 203 2.1e-12 40.3 0.0 2 2 0.00022 0.021 7.7 0.0 90 157 209 282 198 301 0.76 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_31 - 313 DUF258 PF03193.11 161 0.00024 13.2 0.0 1 1 8.4e-06 0.0004 12.4 0.0 24 57 17 51 3 73 0.78 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_16 - 672 DUF258 PF03193.11 161 0.00073 11.6 0.0 1 1 4.1e-05 0.002 10.2 0.0 34 51 268 285 249 303 0.78 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_10 - 514 TraG-D_C PF12696.2 128 1.1e-42 137.7 0.0 1 1 2.4e-44 1.1e-42 137.7 0.0 2 128 282 405 281 405 0.91 # 8148 # 9689 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.429 2_16 - 672 TraG-D_C PF12696.2 128 5e-05 16.0 0.3 1 1 6.6e-06 0.00031 13.5 0.3 15 100 517 626 501 661 0.62 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 5_1 - 450 NAD_binding_2 PF03446.10 163 2.7e-05 16.9 0.2 1 2 0.00026 0.025 7.2 0.0 6 35 8 37 5 44 0.93 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 NAD_binding_2 PF03446.10 163 2.7e-05 16.9 0.2 2 2 0.00034 0.033 6.9 0.1 3 38 161 196 159 283 0.71 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_1 - 270 AAA_31 PF13614.1 157 1.8e-11 37.0 0.0 1 1 4.5e-13 4.3e-11 35.8 0.0 9 151 11 160 4 165 0.77 # 471 # 1280 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 2_25 - 227 AAA_33 PF13671.1 143 3.1e-11 36.2 0.0 1 1 9.6e-13 4.6e-11 35.6 0.0 2 137 8 139 7 146 0.81 # 21378 # 22058 # -1 # ID=2_25;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_31 - 313 AAA_33 PF13671.1 143 0.00051 12.8 0.6 1 1 1.9e-05 0.0009 12.0 0.6 1 19 31 49 31 198 0.87 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_1 - 450 NAD_Gly3P_dh_N PF01210.18 157 4.7e-07 22.5 0.0 1 2 6.3e-06 0.0006 12.4 0.0 4 33 8 37 5 83 0.89 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 NAD_Gly3P_dh_N PF01210.18 157 4.7e-07 22.5 0.0 2 2 0.00017 0.016 7.8 0.0 2 36 162 196 161 225 0.90 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 2-Hacid_dh_C PF02826.14 178 9.5e-10 30.7 0.1 1 2 8.3e-05 0.0079 8.2 0.1 41 70 8 37 3 47 0.92 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 2-Hacid_dh_C PF02826.14 178 9.5e-10 30.7 0.1 2 2 3e-08 2.8e-06 19.4 0.0 27 73 150 196 142 213 0.80 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 XdhC_C PF13478.1 136 5.9e-06 19.5 0.0 1 2 0.0045 0.43 3.7 0.0 2 35 7 40 7 75 0.85 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 XdhC_C PF13478.1 136 5.9e-06 19.5 0.0 2 2 4.8e-06 0.00046 13.4 0.0 1 58 162 221 162 232 0.83 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_31 - 313 AAA_30 PF13604.1 196 6e-05 15.5 0.0 1 1 2.8e-06 0.00013 14.4 0.0 17 45 28 56 23 118 0.83 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_34 - 109 AAA_30 PF13604.1 196 0.00019 13.8 0.0 1 1 4.4e-06 0.00021 13.7 0.0 47 91 11 59 4 99 0.74 # 34162 # 34488 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.440 5_1 - 450 ApbA PF02558.11 151 1.1e-06 20.9 0.5 1 2 2.3e-05 0.0022 10.3 0.0 3 31 8 36 7 45 0.93 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 ApbA PF02558.11 151 1.1e-06 20.9 0.5 2 2 0.00013 0.013 7.8 0.1 2 75 163 255 162 261 0.75 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_16 - 672 FtsK_SpoIIIE PF01580.13 205 0.0002 13.7 0.0 1 1 5.6e-06 0.00054 12.3 0.0 40 80 271 307 250 321 0.78 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 1_31 - 313 ABC_tran PF00005.22 137 2.5e-34 111.3 0.0 1 1 7.7e-36 3.7e-34 110.8 0.0 2 136 20 165 19 166 0.91 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_25 - 227 ABC_tran PF00005.22 137 2.2e-05 17.6 0.5 1 1 1.1e-06 5.1e-05 16.4 0.5 12 80 6 118 2 221 0.72 # 21378 # 22058 # -1 # ID=2_25;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 5_1 - 450 K_oxygenase PF13434.1 341 1.2e-09 30.3 0.0 1 3 0.058 5.5 -1.5 0.0 6 37 7 37 3 39 0.77 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 K_oxygenase PF13434.1 341 1.2e-09 30.3 0.0 2 3 2.6e-08 2.5e-06 19.4 0.0 130 205 105 174 94 209 0.81 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 K_oxygenase PF13434.1 341 1.2e-09 30.3 0.0 3 3 0.00011 0.01 7.5 0.1 292 338 213 256 203 259 0.81 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 UDPG_MGDP_dh_N PF03721.9 185 4.2e-09 28.8 0.9 1 2 0.016 1.5 1.0 0.0 5 33 8 36 5 39 0.90 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 UDPG_MGDP_dh_N PF03721.9 185 4.2e-09 28.8 0.9 2 2 2.5e-09 2.4e-07 23.1 0.9 2 85 161 256 160 290 0.66 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_31 - 313 AAA_19 PF13245.1 76 1.8e-05 17.3 0.0 1 1 5.4e-07 5.1e-05 15.9 0.0 10 36 29 54 22 68 0.84 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_1 - 450 NAD_binding_10 PF13460.1 183 0.00072 12.4 0.4 1 3 0.00056 0.054 6.3 0.0 3 34 8 38 7 45 0.89 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 NAD_binding_10 PF13460.1 183 0.00072 12.4 0.4 2 3 0.065 6.2 -0.4 0.1 2 35 163 195 162 214 0.72 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 NAD_binding_10 PF13460.1 183 0.00072 12.4 0.4 3 3 0.0077 0.73 2.6 0.1 11 74 203 267 200 296 0.66 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_16 - 672 AAA_10 PF12846.2 304 7.6e-56 182.5 0.7 1 1 4.7e-57 1.5e-55 181.6 0.7 1 294 269 578 269 587 0.87 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_10 - 514 AAA_10 PF12846.2 304 1.9e-15 49.9 0.1 1 1 7.8e-17 2.5e-15 49.5 0.1 1 302 23 362 23 364 0.74 # 8148 # 9689 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.429 1_31 - 313 AAA_10 PF12846.2 304 1.6e-06 20.5 1.1 1 2 2e-05 0.00064 12.0 0.7 4 22 32 50 29 54 0.88 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 AAA_10 PF12846.2 304 1.6e-06 20.5 1.1 2 2 0.00079 0.025 6.8 0.0 178 268 64 203 52 219 0.74 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 SbcCD_C PF13558.1 90 8.1e-05 15.4 0.1 1 1 1.2e-05 0.0012 11.7 0.1 54 87 152 179 112 182 0.74 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_1 - 450 DAO PF01266.19 358 1.2e-06 20.4 1.2 1 3 3.8e-05 0.0036 9.0 0.0 3 32 7 37 5 93 0.89 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 DAO PF01266.19 358 1.2e-06 20.4 1.2 2 3 0.00068 0.064 4.9 0.2 2 31 162 191 161 196 0.85 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 DAO PF01266.19 358 1.2e-06 20.4 1.2 3 3 0.0012 0.11 4.1 0.1 150 201 203 257 198 401 0.76 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_14 - 415 Viral_helicase1 PF01443.13 234 5.9e-06 18.7 0.2 1 2 0.0098 0.93 1.7 0.0 157 208 99 151 77 160 0.65 # 11205 # 12449 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.499 1_14 - 415 Viral_helicase1 PF01443.13 234 5.9e-06 18.7 0.2 2 2 4.3e-07 4e-05 16.0 0.0 46 135 142 227 115 242 0.82 # 11205 # 12449 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.499 5_1 - 450 NAD_binding_9 PF13454.1 156 0.0001 14.9 2.4 1 3 0.00062 0.059 6.0 0.0 1 39 7 41 7 60 0.79 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 NAD_binding_9 PF13454.1 156 0.0001 14.9 2.4 2 3 0.039 3.7 0.1 0.1 1 34 163 191 163 197 0.71 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 NAD_binding_9 PF13454.1 156 0.0001 14.9 2.4 3 3 0.00032 0.03 6.9 0.1 112 155 212 257 201 258 0.71 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 Pyr_redox PF00070.22 80 1.4e-24 79.2 0.1 1 2 0.00054 0.051 6.9 0.0 3 34 7 38 5 43 0.92 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 Pyr_redox PF00070.22 80 1.4e-24 79.2 0.1 2 2 1.4e-23 1.3e-21 69.7 0.0 1 77 161 235 161 241 0.96 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 2_10 - 514 TrwB_AAD_bind PF10412.4 386 7.8e-36 116.2 0.0 1 1 2.5e-36 1.2e-34 112.3 0.0 13 381 21 419 14 423 0.74 # 8148 # 9689 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.429 2_16 - 672 TrwB_AAD_bind PF10412.4 386 4.4e-07 21.6 0.1 1 2 2.7e-05 0.0013 10.2 0.0 12 56 266 310 256 317 0.74 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_16 - 672 TrwB_AAD_bind PF10412.4 386 4.4e-07 21.6 0.1 2 2 6.5e-05 0.0031 8.9 0.0 237 312 492 574 478 662 0.85 # 14131 # 16146 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.410 2_10 - 514 T4SS-DNA_transf PF02534.9 469 2.5e-132 434.5 6.4 1 1 3.4e-134 3.2e-132 434.2 6.4 45 450 24 443 5 487 0.93 # 8148 # 9689 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.429 1_31 - 313 UPF0079 PF02367.12 123 0.00036 13.0 0.0 1 1 6.9e-06 0.00065 12.2 0.0 9 39 23 53 16 62 0.82 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_1 - 450 TrkA_N PF02254.13 116 2.9e-09 29.8 0.1 1 2 3e-07 2.8e-05 17.0 0.0 2 31 7 36 6 39 0.89 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 TrkA_N PF02254.13 116 2.9e-09 29.8 0.1 2 2 6.4e-05 0.0061 9.4 0.0 2 52 163 213 162 215 0.90 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_1 - 450 AlaDh_PNT_C PF01262.16 168 2.1e-05 17.0 0.0 1 1 4.6e-07 4.4e-05 15.9 0.0 17 60 156 199 144 239 0.87 # 549 # 1898 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_31 - 313 AAA_24 PF13479.1 213 0.0013 11.2 0.6 1 2 9.2e-05 0.0088 8.4 0.1 6 23 32 49 28 61 0.88 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 AAA_24 PF13479.1 213 0.0013 11.2 0.6 2 2 0.025 2.3 0.5 0.0 114 137 175 198 172 212 0.84 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 NACHT PF05729.7 166 0.00057 12.4 0.1 1 2 2.4e-05 0.0023 10.4 0.0 2 21 31 50 30 55 0.87 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 NACHT PF05729.7 166 0.00057 12.4 0.1 2 2 0.066 6.2 -0.7 0.0 91 127 162 196 109 208 0.80 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 AAA_25 PF13481.1 194 0.00057 12.1 0.1 1 2 0.0001 0.0049 9.1 0.1 30 50 26 46 15 50 0.88 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_31 - 313 AAA_25 PF13481.1 194 0.00057 12.1 0.1 2 2 0.048 2.3 0.4 0.0 166 188 174 196 109 200 0.80 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_16 - 253 AAA_25 PF13481.1 194 0.00061 12.0 0.5 1 1 5.4e-05 0.0025 10.0 0.2 30 58 97 125 71 138 0.86 # 14190 # 14948 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.491 1_31 - 313 AAA_28 PF13521.1 163 0.00031 13.6 0.0 1 1 9.5e-06 0.0009 12.1 0.0 2 22 32 52 31 88 0.82 # 31016 # 31954 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/69ec2b21-a96b-4a56-8c7b-a3c73a3c6c35 # Target file: checkm_output/bins/pGCA_000155515.2.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000155515.2.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/69ec2b21-a96b-4a56-8c7b-a3c73a3c6c35 checkm_output/bins/pGCA_000155515.2.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:39:43 2020 # [ok]