#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_6                  -             93 Seryl_tRNA_N         PF02403.17   108   0.00039    9.9  10.0   1   1   0.00014    0.0012    8.3  10.0    29    79    13    62     3    91 0.66 # 4671 # 4949 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=14bp;gc_cont=0.269
1_1                  -            351 Shikimate_DH         PF01488.15   135   1.4e-05   14.5   0.0   1   1   3.8e-06     3e-05   13.5   0.0     7    84   107   187   101   219 0.77 # 303 # 1355 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.306
1_1                  -            351 ApbA                 PF02558.11   151   3.9e-05   12.5   0.0   1   1   7.6e-06     6e-05   11.9   0.0     2    88   116   199   115   212 0.66 # 303 # 1355 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.306
1_1                  -            351 ThiF                 PF00899.16   136   1.7e-30   95.0   0.0   1   1   8.4e-31   6.7e-30   93.0   0.0     4   126   114   239   111   249 0.92 # 303 # 1355 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.306
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/4cf89dcb-1c8f-4ee2-b439-a528b7af1934
# Target file:     checkm_output/bins/pGCA_000093185.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000093185.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4cf89dcb-1c8f-4ee2-b439-a528b7af1934 checkm_output/bins/pGCA_000093185.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:39:33 2020
# [ok]