# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_22 - 524 ABC_ATPase PF09818.4 448 2.3e-05 14.2 0.2 1 2 0.00053 0.016 4.9 0.2 220 264 314 364 299 371 0.86 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 ABC_ATPase PF09818.4 448 2.3e-05 14.2 0.2 2 2 0.00012 0.0036 7.0 0.0 299 352 427 481 418 483 0.90 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_1 - 258 MipZ PF09140.6 261 3.9e-07 20.6 0.1 1 2 1.3e-05 0.00039 10.7 0.1 10 56 1 47 1 87 0.81 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_1 - 258 MipZ PF09140.6 261 3.9e-07 20.6 0.1 2 2 8.6e-05 0.0026 8.0 0.0 84 125 102 143 68 154 0.78 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_1 - 258 YhjQ PF06564.7 244 5.3e-10 30.2 0.1 1 1 2.5e-11 7.5e-10 29.7 0.1 11 151 1 150 1 170 0.85 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_28 - 48 Eno-Rase_FAD_bd PF07055.7 65 8.2e-06 17.0 0.1 1 1 3.6e-07 1.1e-05 16.6 0.1 45 65 7 27 4 27 0.93 # 25215 # 25358 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.312 1_19 - 110 SSB PF00436.20 104 1e-25 80.9 0.0 1 1 3.9e-27 1.2e-25 80.7 0.0 1 104 1 99 1 99 0.97 # 17060 # 17389 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.355 1_23 - 529 AAA_22 PF13401.1 131 5e-06 17.9 2.3 1 1 1.7e-06 2.6e-05 15.6 0.4 7 120 348 504 342 516 0.63 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 AAA_22 PF13401.1 131 4.9e-05 14.7 1.4 1 1 2.9e-05 0.00044 11.6 1.4 7 37 347 391 341 509 0.54 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_1 - 258 SRP54 PF00448.17 196 5.7e-05 13.8 1.1 1 2 6.1e-06 0.00018 12.2 0.4 11 54 2 45 1 79 0.79 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_1 - 258 SRP54 PF00448.17 196 5.7e-05 13.8 1.1 2 2 0.046 1.4 -0.5 0.0 67 90 101 123 73 125 0.71 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_25 - 339 NAD_binding_7 PF13241.1 103 6.5e-05 14.4 0.0 1 1 5.2e-06 0.00016 13.2 0.0 4 50 117 161 114 221 0.69 # 22456 # 23472 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.304 1_22 - 524 AAA_17 PF13207.1 121 5.9e-05 15.1 0.5 1 1 6.5e-06 0.0002 13.4 0.5 1 33 346 375 346 497 0.68 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 AAA_21 PF13304.1 303 6.2e-08 24.1 5.0 1 2 0.083 2.5 -0.9 0.3 121 147 86 112 18 169 0.56 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 AAA_21 PF13304.1 303 6.2e-08 24.1 5.0 2 2 2.1e-09 6.2e-08 24.1 5.0 3 298 348 507 347 510 0.90 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 MobB PF03205.9 140 0.00019 12.4 0.1 1 1 1.6e-05 0.00049 11.0 0.1 3 36 348 380 347 386 0.84 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_1 - 258 ArsA_ATPase PF02374.10 305 1.9e-13 41.2 0.1 1 1 9.9e-15 3e-13 40.6 0.1 10 137 1 127 1 169 0.88 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_22 - 524 T2SE PF00437.15 272 9e-07 19.2 0.2 1 1 1.4e-07 2e-06 18.0 0.2 115 155 331 371 279 377 0.82 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 T2SE PF00437.15 272 3.1e-05 14.1 0.3 1 1 5.5e-06 8.3e-05 12.7 0.0 126 160 343 377 324 392 0.89 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 G-alpha PF00503.15 389 0.00017 11.5 1.2 1 1 1.2e-05 0.00035 10.5 1.1 55 77 341 363 321 519 0.89 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_25 - 339 Shikimate_DH PF01488.15 135 1.9e-07 22.5 0.0 1 1 1.4e-08 4.2e-07 21.4 0.0 6 56 114 164 109 211 0.85 # 22456 # 23472 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.304 1_23 - 529 Zeta_toxin PF06414.7 201 1.4e-05 15.5 0.0 1 1 2e-06 3e-05 14.4 0.0 19 62 348 392 342 401 0.87 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 Zeta_toxin PF06414.7 201 0.00015 12.1 0.1 1 1 1.9e-05 0.00029 11.2 0.1 19 49 347 378 340 381 0.92 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_25 - 339 FAD_binding_3 PF01494.14 356 8.6e-06 16.1 0.3 1 1 4.2e-07 1.3e-05 15.6 0.3 3 30 122 149 120 158 0.90 # 22456 # 23472 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.304 1_23 - 529 SMC_N PF02463.14 220 2.3e-05 14.9 5.5 1 1 6e-07 1.8e-05 15.2 3.0 28 198 349 508 326 523 0.70 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_1 - 258 Fer4_NifH PF00142.13 273 8e-08 22.9 0.9 1 2 6.1e-09 1.8e-07 21.7 0.1 9 54 1 46 1 76 0.88 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_1 - 258 Fer4_NifH PF00142.13 273 8e-08 22.9 0.9 2 2 0.1 3 -1.9 0.0 163 199 211 247 204 254 0.67 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_23 - 529 Arch_ATPase PF01637.13 234 2.4e-05 15.3 0.9 1 1 5.2e-06 0.00016 12.6 0.9 23 144 348 495 341 508 0.58 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_23 - 529 AAA_16 PF13191.1 185 4.7e-06 17.9 0.0 1 1 8.5e-07 1.3e-05 16.5 0.0 25 55 346 376 335 393 0.85 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 AAA_16 PF13191.1 185 8.9e-06 17.0 0.0 1 1 1.5e-06 2.3e-05 15.6 0.0 25 54 345 374 338 400 0.82 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 AAA_23 PF13476.1 202 0.045 5.2 11.6 1 1 0.00089 0.027 6.0 9.1 21 39 346 364 318 496 0.66 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 AAA_18 PF13238.1 129 1.2e-06 20.1 0.2 1 1 2.1e-07 3.2e-06 18.7 0.1 1 92 347 436 347 477 0.73 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 AAA_18 PF13238.1 129 5e-05 14.9 2.0 1 1 6.2e-06 9.3e-05 14.0 0.7 1 35 348 386 348 523 0.76 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_1 - 258 CbiA PF01656.18 195 2e-30 96.8 0.1 1 1 8.7e-32 2.6e-30 96.5 0.1 8 193 1 220 1 222 0.78 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_9 - 292 Ribosomal_S13 PF00416.17 107 4.1e-05 15.3 0.4 1 1 1.1e-05 0.00034 12.3 0.0 35 89 73 126 60 133 0.86 # 7528 # 8403 # 1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.304 1_22 - 524 AAA_14 PF13173.1 128 0.001 10.2 3.2 1 2 8.2e-05 0.0024 9.0 0.2 3 45 345 385 343 430 0.72 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 AAA_14 PF13173.1 128 0.001 10.2 3.2 2 2 0.031 0.94 0.6 0.1 52 94 459 503 423 514 0.67 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 SRPRB PF09439.5 181 2.9e-05 14.5 0.0 1 1 2.5e-06 7.6e-05 13.2 0.0 4 45 345 387 342 399 0.82 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 AAA_29 PF13555.1 62 9.7e-08 22.7 0.1 1 1 1.7e-08 2.5e-07 21.4 0.1 15 51 338 373 326 381 0.74 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 AAA_29 PF13555.1 62 6.3e-07 20.2 0.5 1 1 1.1e-07 1.6e-06 18.8 0.5 19 40 341 361 330 369 0.85 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 AAA PF00004.24 132 1.8e-05 16.2 2.0 1 1 5.8e-06 8.8e-05 14.0 0.6 1 30 348 382 348 519 0.60 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 AAA PF00004.24 132 0.00015 13.2 1.5 1 1 5.1e-05 0.00077 10.9 1.5 1 32 347 378 347 514 0.79 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 DUF258 PF03193.11 161 3.3e-07 20.8 0.0 1 1 4.9e-08 7.3e-07 19.7 0.0 11 78 320 388 311 432 0.77 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 DUF258 PF03193.11 161 9.6e-07 19.3 0.2 1 1 1.7e-07 2.6e-06 17.9 0.2 32 73 340 382 313 387 0.79 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_1 - 258 AAA_31 PF13614.1 157 6.7e-14 43.3 1.0 1 1 5.5e-15 1.6e-13 42.0 0.8 10 149 1 147 1 154 0.78 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_23 - 529 NTPase_1 PF03266.10 168 4.6e-05 14.4 0.4 1 1 1.3e-05 0.0002 12.3 0.1 1 27 347 373 347 383 0.89 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 NTPase_1 PF03266.10 168 0.00013 12.9 1.7 1 1 9.9e-06 0.00015 12.7 0.5 1 24 346 369 346 378 0.87 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 AAA_33 PF13671.1 143 9.6e-05 13.5 0.0 1 1 7.2e-06 0.00021 12.4 0.0 2 39 348 388 348 517 0.86 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_25 - 339 2-Hacid_dh_C PF02826.14 178 6.1e-06 16.7 0.0 1 1 3.6e-07 1.1e-05 15.9 0.0 14 67 101 152 94 170 0.76 # 22456 # 23472 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.304 1_23 - 529 AAA_30 PF13604.1 196 0.00038 11.2 0.0 1 2 8.6e-05 0.0026 8.5 0.0 18 50 345 377 337 384 0.81 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_23 - 529 AAA_30 PF13604.1 196 0.00038 11.2 0.0 2 2 0.041 1.2 -0.2 0.0 87 127 464 505 436 508 0.73 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 ABC_tran PF00005.22 137 3.1e-27 86.7 0.1 1 1 5.2e-28 7.8e-27 85.5 0.1 5 136 338 479 322 480 0.88 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 ABC_tran PF00005.22 137 2.7e-26 83.7 0.1 1 1 5.1e-27 7.6e-26 82.3 0.1 6 137 340 481 336 481 0.83 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_23 - 529 SbcCD_C PF13558.1 90 6.2e-05 14.1 0.1 1 1 0.00016 0.0024 9.1 0.1 20 86 440 493 428 497 0.72 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 SbcCD_C PF13558.1 90 0.00017 12.7 0.1 1 1 0.00014 0.0021 9.3 0.1 2 84 420 490 419 496 0.79 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_25 - 339 ThiF PF00899.16 136 1.7e-26 83.9 0.2 1 1 1.6e-27 4.8e-26 82.4 0.1 2 96 120 216 119 222 0.92 # 22456 # 23472 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.304 1_23 - 529 DUF2075 PF09848.4 352 9.4e-06 15.9 0.9 1 2 0.032 0.95 -0.5 0.1 25 75 162 215 141 232 0.76 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_23 - 529 DUF2075 PF09848.4 352 9.4e-06 15.9 0.9 2 2 1.4e-06 4.1e-05 13.8 0.1 4 123 348 504 346 507 0.74 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 PduV-EutP PF10662.4 143 2.5e-05 15.0 0.1 1 1 2.3e-06 6.8e-05 13.6 0.1 2 37 345 378 344 384 0.77 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 DUF815 PF05673.8 250 2.9e-06 17.5 0.1 1 1 2.8e-07 8.4e-06 16.0 0.0 49 81 341 373 297 382 0.79 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_1 - 258 ParA PF10609.4 81 0.00019 12.6 0.5 1 1 1.3e-05 0.00039 11.5 0.1 2 51 118 165 117 171 0.79 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_19 - 110 tRNA_anti_2 PF13742.1 99 0.00014 13.0 0.0 1 1 6e-06 0.00018 12.6 0.0 41 85 26 76 5 87 0.77 # 17060 # 17389 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.355 1_1 - 258 ArgK PF03308.11 267 0.00019 11.5 0.1 1 2 0.00012 0.0035 7.3 0.0 39 72 2 35 1 49 0.92 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_1 - 258 ArgK PF03308.11 267 0.00019 11.5 0.1 2 2 0.0044 0.13 2.1 0.0 232 265 223 256 195 257 0.75 # 1 # 774 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_23 - 529 RNA_helicase PF00910.17 107 8.5e-05 14.0 0.6 1 1 1.6e-05 0.00048 11.6 0.0 1 25 348 372 348 398 0.74 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 UPF0079 PF02367.12 123 1.5e-05 15.8 0.2 1 1 2.4e-06 3.6e-05 14.6 0.2 12 40 341 369 335 376 0.85 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 UPF0079 PF02367.12 123 3.7e-05 14.6 0.0 1 1 7.3e-06 0.00011 13.1 0.0 12 43 342 373 337 378 0.86 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 1_22 - 524 AAA_24 PF13479.1 213 3e-05 14.8 0.9 1 3 0.014 0.42 1.3 0.0 76 121 203 250 203 295 0.76 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 AAA_24 PF13479.1 213 3e-05 14.8 0.9 2 3 3.1e-05 0.00093 10.0 0.4 4 24 345 366 342 397 0.87 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 AAA_24 PF13479.1 213 3e-05 14.8 0.9 3 3 0.071 2.1 -1.0 0.0 116 136 488 507 455 518 0.83 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 NACHT PF05729.7 166 0.00018 12.4 0.6 1 1 1.2e-05 0.00035 11.5 0.6 3 25 347 369 345 375 0.85 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 AAA_5 PF07728.9 139 0.00016 12.6 0.2 1 2 9.5e-05 0.0014 9.6 0.1 2 31 347 376 346 384 0.81 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 524 AAA_5 PF07728.9 139 0.00016 12.6 0.2 2 2 0.067 1 0.3 0.0 53 90 456 496 441 502 0.70 # 18406 # 19977 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.316 1_23 - 529 AAA_5 PF07728.9 139 0.00017 12.5 0.0 1 1 2.7e-05 0.00041 11.3 0.0 2 24 348 371 347 382 0.84 # 19984 # 21570 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/61800b99-ff47-40c4-a1ea-2d182921e7b2 # Target file: checkm_output/bins/pGCA_000091405.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000091405.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/61800b99-ff47-40c4-a1ea-2d182921e7b2 checkm_output/bins/pGCA_000091405.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:39:29 2020 # [ok]