# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_7 - 541 UPF0020 PF01170.13 180 9.1e-07 21.0 0.0 1 1 2.6e-08 1.8e-06 20.0 0.0 25 118 228 319 217 328 0.86 # 7990 # 9612 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.427 6_2 - 450 Saccharop_dh PF03435.13 386 0.00041 11.8 0.0 1 2 2.7e-05 0.0019 9.6 0.0 2 33 7 36 7 39 0.90 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 Saccharop_dh PF03435.13 386 0.00041 11.8 0.0 2 2 0.033 2.3 -0.6 0.0 2 38 163 197 162 213 0.82 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 3_1 - 270 MipZ PF09140.6 261 1.1e-09 30.1 0.1 1 2 3.2e-08 2.3e-06 19.3 0.0 3 46 5 47 3 82 0.80 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 270 MipZ PF09140.6 261 1.1e-09 30.1 0.1 2 2 6e-05 0.0042 8.5 0.0 79 125 108 154 95 159 0.84 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 270 YhjQ PF06564.7 244 3e-15 48.6 0.0 1 1 5.6e-17 3.9e-15 48.2 0.0 2 150 3 160 1 188 0.84 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 6_2 - 450 3HCDH_N PF02737.13 180 2.6e-08 26.1 0.0 1 2 0.00031 0.022 6.8 0.0 4 34 8 38 5 46 0.93 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 3HCDH_N PF02737.13 180 2.6e-08 26.1 0.0 2 2 2.2e-07 1.5e-05 17.1 0.0 2 49 162 209 161 250 0.83 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 GIDA PF01134.17 392 2.6e-06 18.9 0.1 1 3 4e-06 0.00028 12.2 0.0 3 48 7 58 5 88 0.84 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 GIDA PF01134.17 392 2.6e-06 18.9 0.1 2 3 0.0022 0.15 3.2 0.0 3 33 163 193 161 206 0.90 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 GIDA PF01134.17 392 2.6e-06 18.9 0.1 3 3 0.074 5.2 -1.9 0.0 343 366 278 300 215 302 0.60 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 Pyr_redox_2 PF07992.9 201 2e-38 124.6 1.6 1 1 1.6e-38 1.1e-36 119.0 1.6 3 200 7 302 5 303 0.94 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 NAD_binding_7 PF13241.1 103 4.1e-06 19.5 0.0 1 2 0.001 0.072 5.8 0.0 6 39 2 35 1 116 0.82 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 NAD_binding_7 PF13241.1 103 4.1e-06 19.5 0.0 2 2 2.2e-05 0.0016 11.2 0.0 7 45 159 222 153 274 0.64 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 3_1 - 270 ArsA_ATPase PF02374.10 305 2e-11 35.8 0.1 1 2 1e-12 7.2e-11 34.0 0.0 9 137 11 138 5 142 0.80 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 270 ArsA_ATPase PF02374.10 305 2e-11 35.8 0.1 2 2 0.053 3.7 -1.2 0.0 94 235 152 178 140 227 0.65 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 6_2 - 450 NAD_binding_8 PF13450.1 68 5.4e-08 25.2 0.3 1 2 2.8e-05 0.002 10.6 0.0 1 30 8 37 8 46 0.87 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 NAD_binding_8 PF13450.1 68 5.4e-08 25.2 0.3 2 2 1.1e-05 0.00077 11.9 0.0 1 31 164 194 164 195 0.97 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 F420_oxidored PF03807.12 96 1.1e-05 18.2 0.1 1 2 1.5e-05 0.0011 11.9 0.0 4 36 8 36 5 42 0.88 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 F420_oxidored PF03807.12 96 1.1e-05 18.2 0.1 2 2 0.0068 0.47 3.4 0.0 1 30 161 187 161 236 0.79 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 FAD_binding_3 PF01494.14 356 1.4e-05 16.7 0.2 1 3 0.00037 0.026 5.9 0.0 5 35 7 37 3 42 0.89 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 FAD_binding_3 PF01494.14 356 1.4e-05 16.7 0.2 2 3 0.00052 0.036 5.4 0.0 5 35 163 193 161 205 0.92 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 FAD_binding_3 PF01494.14 356 1.4e-05 16.7 0.2 3 3 0.008 0.56 1.5 0.1 118 162 207 251 199 256 0.84 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 3_1 - 270 VirC1 PF07015.6 231 0.0003 12.3 0.6 1 1 7e-06 0.00049 11.6 0.1 3 45 4 46 2 70 0.86 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 270 Fer4_NifH PF00142.13 273 5.4e-09 27.9 0.6 1 2 1.2e-09 8.2e-08 24.1 0.1 8 59 11 63 7 78 0.87 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 270 Fer4_NifH PF00142.13 273 5.4e-09 27.9 0.6 2 2 0.0051 0.36 2.3 0.1 142 247 150 263 119 268 0.72 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 270 CbiA PF01656.18 195 8.8e-31 99.2 0.1 1 1 1.6e-32 1.1e-30 98.9 0.1 2 184 6 221 5 234 0.77 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 6_2 - 450 HI0933_like PF03486.9 409 6e-08 23.8 0.1 1 3 6e-05 0.0042 7.9 0.0 2 35 5 38 4 42 0.93 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 HI0933_like PF03486.9 409 6e-08 23.8 0.1 2 3 0.00042 0.03 5.1 0.0 2 36 161 195 160 197 0.91 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 HI0933_like PF03486.9 409 6e-08 23.8 0.1 3 3 8.9e-05 0.0062 7.3 0.0 111 164 202 257 196 284 0.79 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 1_10 - 77 PGK PF00162.14 384 0.00039 11.4 0.1 1 1 5.5e-06 0.00038 11.4 0.1 72 127 20 74 3 76 0.82 # 10190 # 10420 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 6_2 - 450 Thi4 PF01946.12 230 2.3e-05 16.0 0.0 1 2 2.3e-06 0.00016 13.2 0.0 21 57 7 43 3 63 0.88 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 Thi4 PF01946.12 230 2.3e-05 16.0 0.0 2 2 0.045 3.1 -0.8 0.0 20 49 162 191 146 194 0.85 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 4_3 - 54 rRNA_methylase PF06962.7 140 9.8e-18 56.6 0.0 1 1 1.5e-19 1.1e-17 56.5 0.0 91 140 1 50 1 50 0.99 # 1551 # 1712 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.389 6_2 - 450 Pyr_redox_3 PF13738.1 203 1.5e-12 40.4 0.0 1 2 7.2e-11 5.1e-09 28.9 0.0 1 198 7 190 7 195 0.75 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 Pyr_redox_3 PF13738.1 203 1.5e-12 40.4 0.0 2 2 0.00022 0.015 7.7 0.0 90 157 209 282 198 301 0.76 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 2_6 - 1056 Ribosomal_L10 PF00466.15 100 0.00019 13.8 1.4 1 2 0.00021 0.015 7.7 0.4 34 82 344 398 338 414 0.81 # 4809 # 7976 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.449 2_6 - 1056 Ribosomal_L10 PF00466.15 100 0.00019 13.8 1.4 2 2 0.0042 0.3 3.5 0.0 50 67 478 495 456 520 0.83 # 4809 # 7976 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.449 2_7 - 541 N6_Mtase PF02384.11 311 1.9e-117 384.1 0.0 1 1 4.3e-119 3e-117 383.5 0.0 2 308 181 489 180 492 0.96 # 7990 # 9612 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.427 6_2 - 450 NAD_binding_2 PF03446.10 163 2e-05 16.9 0.2 1 2 0.00026 0.018 7.2 0.0 6 35 8 37 5 44 0.93 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 NAD_binding_2 PF03446.10 163 2e-05 16.9 0.2 2 2 0.00034 0.024 6.9 0.1 3 38 161 196 159 283 0.71 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 3_1 - 270 AAA_31 PF13614.1 157 1.3e-11 37.0 0.0 1 1 4.5e-13 3.1e-11 35.8 0.0 9 151 11 160 4 165 0.77 # 123 # 932 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 2_7 - 541 Methyltransf_26 PF13659.1 117 4.8e-12 38.4 0.0 1 1 2.3e-13 1.6e-11 36.7 0.0 3 116 234 368 232 369 0.78 # 7990 # 9612 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.427 6_2 - 450 NAD_Gly3P_dh_N PF01210.18 157 3.4e-07 22.5 0.0 1 2 6.3e-06 0.00044 12.4 0.0 4 33 8 37 5 83 0.89 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 NAD_Gly3P_dh_N PF01210.18 157 3.4e-07 22.5 0.0 2 2 0.00017 0.012 7.8 0.0 2 36 162 196 161 225 0.90 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 2-Hacid_dh_C PF02826.14 178 6.9e-10 30.7 0.1 1 2 8.3e-05 0.0058 8.2 0.1 41 70 8 37 3 47 0.92 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 2-Hacid_dh_C PF02826.14 178 6.9e-10 30.7 0.1 2 2 3e-08 2.1e-06 19.4 0.0 27 73 150 196 142 213 0.80 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 XdhC_C PF13478.1 136 4.3e-06 19.5 0.0 1 2 0.0045 0.31 3.7 0.0 2 35 7 40 7 75 0.85 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 XdhC_C PF13478.1 136 4.3e-06 19.5 0.0 2 2 4.8e-06 0.00034 13.4 0.0 1 58 162 221 162 232 0.83 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 ApbA PF02558.11 151 8.6e-07 20.9 0.5 1 2 2.3e-05 0.0016 10.3 0.0 3 31 8 36 7 45 0.93 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 ApbA PF02558.11 151 8.6e-07 20.9 0.5 2 2 0.00013 0.0093 7.8 0.1 2 75 163 255 162 261 0.75 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 K_oxygenase PF13434.1 341 9e-10 30.3 0.0 1 3 0.058 4.1 -1.5 0.0 6 37 7 37 3 39 0.77 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 K_oxygenase PF13434.1 341 9e-10 30.3 0.0 2 3 2.6e-08 1.8e-06 19.4 0.0 130 205 105 174 94 209 0.81 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 K_oxygenase PF13434.1 341 9e-10 30.3 0.0 3 3 0.00011 0.0076 7.5 0.1 292 338 213 256 203 259 0.81 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 2_7 - 541 Eco57I PF07669.6 106 1.8e-09 30.3 0.0 1 1 1.7e-10 1.2e-08 27.8 0.0 3 104 308 418 306 420 0.87 # 7990 # 9612 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.427 6_2 - 450 UDPG_MGDP_dh_N PF03721.9 185 3.1e-09 28.8 0.9 1 2 0.016 1.1 1.0 0.0 5 33 8 36 5 39 0.90 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 UDPG_MGDP_dh_N PF03721.9 185 3.1e-09 28.8 0.9 2 2 2.5e-09 1.7e-07 23.1 0.9 2 85 161 256 160 290 0.66 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 5_2 - 293 RA PF00788.18 93 0.00041 13.3 0.1 1 2 0.0017 0.12 5.4 0.0 17 42 63 88 49 100 0.86 # 807 # 1685 # 1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.424 5_2 - 293 RA PF00788.18 93 0.00041 13.3 0.1 2 2 0.0026 0.18 4.8 0.0 24 49 176 203 159 205 0.82 # 807 # 1685 # 1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.424 6_2 - 450 NAD_binding_10 PF13460.1 183 0.00053 12.4 0.4 1 3 0.00056 0.039 6.3 0.0 3 34 8 38 7 45 0.89 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 NAD_binding_10 PF13460.1 183 0.00053 12.4 0.4 2 3 0.065 4.5 -0.4 0.1 2 35 163 195 162 214 0.72 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 NAD_binding_10 PF13460.1 183 0.00053 12.4 0.4 3 3 0.0077 0.54 2.6 0.1 11 74 203 267 200 296 0.66 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 DAO PF01266.19 358 9.1e-07 20.4 1.2 1 3 3.8e-05 0.0027 9.0 0.0 3 32 7 37 5 93 0.89 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 DAO PF01266.19 358 9.1e-07 20.4 1.2 2 3 0.00068 0.047 4.9 0.2 2 31 162 191 161 196 0.85 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 DAO PF01266.19 358 9.1e-07 20.4 1.2 3 3 0.0012 0.082 4.1 0.1 150 201 203 257 198 401 0.76 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 2_6 - 1056 ResIII PF04851.10 184 7.1e-34 109.6 0.8 1 1 1e-35 7.1e-34 109.6 0.8 4 183 261 431 258 432 0.90 # 4809 # 7976 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.449 6_2 - 450 NAD_binding_9 PF13454.1 156 7.6e-05 14.9 2.4 1 3 0.00062 0.043 6.0 0.0 1 39 7 41 7 60 0.79 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 NAD_binding_9 PF13454.1 156 7.6e-05 14.9 2.4 2 3 0.039 2.7 0.1 0.1 1 34 163 191 163 197 0.71 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 NAD_binding_9 PF13454.1 156 7.6e-05 14.9 2.4 3 3 0.00032 0.022 6.9 0.1 112 155 212 257 201 258 0.71 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 2_6 - 1056 DEAD PF00270.24 169 8.8e-11 34.0 5.1 1 3 2.9e-12 2.1e-10 32.8 0.1 3 142 264 416 262 437 0.69 # 4809 # 7976 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.449 2_6 - 1056 DEAD PF00270.24 169 8.8e-11 34.0 5.1 2 3 0.0096 0.67 1.8 0.1 45 93 523 621 458 637 0.68 # 4809 # 7976 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.449 2_6 - 1056 DEAD PF00270.24 169 8.8e-11 34.0 5.1 3 3 0.084 5.9 -1.3 0.3 36 104 913 980 906 1023 0.71 # 4809 # 7976 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.449 6_2 - 450 Pyr_redox PF00070.22 80 1e-24 79.2 0.1 1 2 0.00054 0.038 6.9 0.0 3 34 7 38 5 43 0.92 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 Pyr_redox PF00070.22 80 1e-24 79.2 0.1 2 2 1.4e-23 9.5e-22 69.7 0.0 1 77 161 235 161 241 0.96 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 TrkA_N PF02254.13 116 2.1e-09 29.8 0.1 1 2 3e-07 2.1e-05 17.0 0.0 2 31 7 36 6 39 0.89 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 TrkA_N PF02254.13 116 2.1e-09 29.8 0.1 2 2 6.4e-05 0.0045 9.4 0.0 2 52 163 213 162 215 0.90 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 6_2 - 450 AlaDh_PNT_C PF01262.16 168 1.6e-05 17.0 0.0 1 1 4.6e-07 3.2e-05 15.9 0.0 17 60 156 199 144 239 0.87 # 663 # 2012 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.420 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/a4a16608-b540-415e-b896-b79c4e7c8849 # Target file: checkm_output/bins/pGCA_000026525.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000026525.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a4a16608-b540-415e-b896-b79c4e7c8849 checkm_output/bins/pGCA_000026525.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:39:25 2020 # [ok]