#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_2                  -            351 Shikimate_DH         PF01488.15   135   1.5e-05   14.5   0.0   1   1   4.1e-06   3.3e-05   13.4   0.0     7    96   107   201   101   219 0.76 # 1173 # 2225 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.303
1_2                  -            351 ApbA                 PF02558.11   151   7.6e-05   11.5   0.0   1   1   1.4e-05   0.00012   10.9   0.0     2    86   116   197   115   210 0.62 # 1173 # 2225 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.303
1_2                  -            351 ThiF                 PF00899.16   136   2.8e-29   91.1   0.0   1   1   1.2e-29   9.3e-29   89.3   0.0     4   126   114   239   111   249 0.92 # 1173 # 2225 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.303
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/9b01b653-7bd5-4343-aaef-f88eb35a0a6f
# Target file:     checkm_output/bins/pGCA_000021465.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000021465.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9b01b653-7bd5-4343-aaef-f88eb35a0a6f checkm_output/bins/pGCA_000021465.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:39:12 2020
# [ok]