# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 307 RNA_pol_Rpb2_7 PF04560.15 82 2.7e-05 13.4 0.1 1 1 1.4e-05 8.6e-05 11.8 0.1 33 75 213 255 190 261 0.86 # 1455 # 2375 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.307 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/7c681f1d-9fd0-43ca-8648-408e55bd0e06 # Target file: checkm_output/bins/pGCA_000019285.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000019285.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7c681f1d-9fd0-43ca-8648-408e55bd0e06 checkm_output/bins/pGCA_000019285.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:39:01 2020 # [ok]