#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_3                  -            210 AAA_22               PF13401.1    131   3.2e-05   14.0   0.5   1   2    0.0001    0.0012    8.9   0.1     5    30     2    27     1    35 0.83 # 1111 # 1740 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308
1_3                  -            210 AAA_22               PF13401.1    131   3.2e-05   14.0   0.5   2   2     0.012      0.14    2.2   0.0    75   107    44    79    32   102 0.69 # 1111 # 1740 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308
1_3                  -            210 AAA_14               PF13173.1    128   3.8e-06   16.8   0.0   1   1   9.6e-07   1.1e-05   15.2   0.0     5    83     4    80     2   102 0.82 # 1111 # 1740 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308
1_3                  -            210 AAA                  PF00004.24   132   6.4e-07   19.6   0.0   1   1   1.1e-07   1.3e-06   18.6   0.0     3   112     6   105     4   119 0.68 # 1111 # 1740 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308
1_3                  -            210 AAA_10               PF12846.2    304     8e-05   12.0   0.0   1   2     0.001     0.013    4.8   0.0     4    21     4    21     2    34 0.81 # 1111 # 1740 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308
1_3                  -            210 AAA_10               PF12846.2    304     8e-05   12.0   0.0   2   2   0.00084      0.01    5.1   0.0   218   267    56   109    45   116 0.85 # 1111 # 1740 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308
1_3                  -            210 Zot                  PF05707.7    193   3.4e-10   29.6   0.0   1   2   0.00086      0.01    5.2   0.0     2    35     3    36     2    43 0.66 # 1111 # 1740 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308
1_3                  -            210 Zot                  PF05707.7    193   3.4e-10   29.6   0.0   2   2   3.6e-09   4.3e-08   22.7   0.0    66   146    47   125    27   162 0.77 # 1111 # 1740 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.308
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/0c10f9d6-e305-42ce-b5bc-880a559c1cfb
# Target file:     checkm_output/bins/pGCA_000017425.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000017425.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/0c10f9d6-e305-42ce-b5bc-880a559c1cfb checkm_output/bins/pGCA_000017425.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:38:57 2020
# [ok]