# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 6_3 - 270 Methyltransf_32 PF13679.1 141 0.00054 13.4 0.0 1 2 0.0028 0.51 3.8 0.0 32 77 11 56 4 97 0.84 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 6_3 - 270 Methyltransf_32 PF13679.1 141 0.00054 13.4 0.0 2 2 0.00021 0.038 7.4 0.0 23 50 169 195 158 228 0.79 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 4_8 - 1561 UPF0020 PF01170.13 180 3.3e-05 17.2 0.0 1 2 0.00012 0.022 8.0 0.0 28 44 887 903 882 951 0.91 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 4_8 - 1561 UPF0020 PF01170.13 180 3.3e-05 17.2 0.0 2 2 0.00076 0.14 5.5 0.0 96 139 991 1037 968 1051 0.71 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 1_23 - 339 cobW PF02492.14 178 0.0011 12.2 0.3 1 1 3.3e-05 0.0058 9.8 0.3 2 121 38 170 37 205 0.61 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 ABC_ATPase PF09818.4 448 0.00014 14.3 1.6 1 2 0.0001 0.0091 8.3 0.0 240 264 31 56 11 61 0.89 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 ABC_ATPase PF09818.4 448 0.00014 14.3 1.6 2 2 0.0016 0.15 4.3 0.4 322 413 156 232 141 257 0.68 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 12_3 - 714 ABC_ATPase PF09818.4 448 0.00032 13.0 0.2 1 2 0.08 7.1 -1.3 0.0 226 262 487 523 461 527 0.82 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 12_3 - 714 ABC_ATPase PF09818.4 448 0.00032 13.0 0.2 2 2 1.2e-05 0.0011 11.3 0.0 304 378 597 672 590 686 0.89 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_23 - 339 IstB_IS21 PF01695.12 178 0.00081 12.6 0.0 1 1 1.1e-05 0.002 11.3 0.0 44 67 33 56 23 61 0.90 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 6_3 - 270 MipZ PF09140.6 261 6.6e-12 38.7 0.0 1 1 1.2e-11 1e-09 31.5 0.0 3 132 4 155 2 177 0.66 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 2_7 - 281 MipZ PF09140.6 261 2.3e-08 27.1 0.0 1 1 2e-08 1.8e-06 20.9 0.0 3 71 28 96 26 178 0.58 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 6_3 - 270 YhjQ PF06564.7 244 9.3e-12 38.5 0.0 1 1 1.6e-13 1.4e-11 37.9 0.0 1 150 1 154 1 201 0.78 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 2_7 - 281 YhjQ PF06564.7 244 1.6e-07 24.6 0.0 1 1 2.6e-09 2.3e-07 24.1 0.0 3 153 27 181 25 185 0.75 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 10_8 - 450 3HCDH_N PF02737.13 180 1.8e-08 27.9 0.0 1 2 0.0048 0.85 2.9 0.1 4 32 10 38 7 108 0.91 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 3HCDH_N PF02737.13 180 1.8e-08 27.9 0.0 2 2 4.1e-09 7.4e-07 22.7 0.0 2 49 165 212 164 233 0.89 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 Pyr_redox_2 PF07992.9 201 3.3e-32 105.7 0.1 1 1 7.6e-34 1.4e-31 103.7 0.1 3 198 9 300 7 303 0.92 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 17_2 - 146 Usp PF00582.21 140 1.3e-24 80.7 0.0 1 1 8.6e-27 1.5e-24 80.5 0.0 2 140 7 145 6 145 0.97 # 2100 # 2537 # 1 # ID=17_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.354 4_2 - 359 DUF87 PF01935.12 229 4.5e-06 20.3 0.2 1 1 1.2e-07 1.1e-05 19.1 0.0 15 60 133 174 128 178 0.87 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 12_3 - 714 DUF87 PF01935.12 229 0.0017 11.9 0.1 1 1 1.9e-05 0.0017 11.9 0.1 26 45 508 527 501 534 0.92 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_23 - 339 NB-ARC PF00931.17 287 0.00017 14.2 0.1 1 1 5.3e-06 0.00048 12.7 0.0 20 40 37 57 24 69 0.86 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_22 - 320 NB-ARC PF00931.17 287 0.0011 11.5 0.0 1 1 2e-05 0.0018 10.9 0.0 19 44 41 66 31 138 0.88 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_23 - 339 AAA_22 PF13401.1 131 8.4e-08 26.2 0.8 1 1 5.5e-08 2.5e-06 21.4 0.8 4 123 36 214 33 220 0.71 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 4_2 - 359 AAA_22 PF13401.1 131 9.7e-07 22.7 0.0 1 1 4.4e-08 2e-06 21.7 0.0 6 124 141 280 137 287 0.69 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 12_3 - 714 AAA_22 PF13401.1 131 4.1e-06 20.7 2.1 1 1 1.4e-06 6e-05 16.9 2.1 7 118 508 666 506 680 0.70 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_22 - 320 AAA_22 PF13401.1 131 0.00021 15.2 1.7 1 1 0.00012 0.0054 10.6 1.7 9 123 46 212 39 221 0.60 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 6_3 - 270 ATP_bind_1 PF03029.12 238 6.2e-05 16.3 0.1 1 1 2.4e-06 0.00043 13.6 0.1 6 99 12 130 10 137 0.67 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 1_22 - 320 PRK PF00485.13 194 0.00013 15.2 0.2 1 1 1.9e-06 0.00033 14.0 0.0 2 81 44 124 43 140 0.80 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 6_3 - 270 SRP54 PF00448.17 196 2.7e-05 17.4 0.7 1 1 9.7e-07 8.7e-05 15.7 0.1 10 40 11 41 1 46 0.84 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 2_7 - 281 SRP54 PF00448.17 196 0.00076 12.7 0.1 1 2 0.00012 0.01 9.0 0.1 11 51 36 76 33 103 0.82 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_7 - 281 SRP54 PF00448.17 196 0.00076 12.7 0.1 2 2 0.028 2.5 1.2 0.0 128 154 190 218 116 221 0.78 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 1_23 - 339 AAA_15 PF13175.1 415 5.4e-09 29.2 0.1 1 2 9.2e-05 0.0082 8.9 0.0 17 56 30 70 14 132 0.75 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 AAA_15 PF13175.1 415 5.4e-09 29.2 0.1 2 2 1.1e-07 9.5e-06 18.5 0.0 361 411 172 216 154 220 0.81 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_22 - 320 AAA_15 PF13175.1 415 1.7e-05 17.7 0.6 1 2 1.1e-05 0.001 11.9 0.9 27 99 46 132 6 141 0.83 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_22 - 320 AAA_15 PF13175.1 415 1.7e-05 17.7 0.6 2 2 0.0046 0.41 3.3 0.0 370 410 173 213 162 218 0.81 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 10_8 - 450 NAD_binding_7 PF13241.1 103 2.8e-05 18.1 0.2 1 2 0.0021 0.37 4.8 0.2 10 39 8 37 3 102 0.82 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 NAD_binding_7 PF13241.1 103 2.8e-05 18.1 0.2 2 2 4.3e-05 0.0078 10.2 0.0 8 54 163 213 156 262 0.74 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 16_1 - 184 N6_N4_Mtase PF01555.13 231 3.9e-16 52.9 1.2 1 2 0.047 8.5 -0.5 0.1 65 88 55 79 9 97 0.54 # 107 # 658 # -1 # ID=16_1;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.286 16_1 - 184 N6_N4_Mtase PF01555.13 231 3.9e-16 52.9 1.2 2 2 4e-18 7.1e-16 52.1 0.1 1 60 114 177 114 182 0.94 # 107 # 658 # -1 # ID=16_1;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.286 12_3 - 714 AAA_17 PF13207.1 121 3.4e-07 24.9 0.1 1 1 2.8e-08 1e-06 23.3 0.1 1 32 507 543 507 613 0.74 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_23 - 339 AAA_17 PF13207.1 121 0.00014 16.4 0.1 1 1 1e-05 0.00036 15.1 0.1 1 20 38 57 38 82 0.90 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 4_2 - 359 AAA_17 PF13207.1 121 0.0011 13.5 0.0 1 1 6.4e-05 0.0023 12.5 0.0 2 100 142 245 141 282 0.57 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 2_7 - 281 AAA_17 PF13207.1 121 0.0014 13.2 0.1 1 1 0.00016 0.0057 11.2 0.1 9 101 36 127 35 205 0.67 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 1_22 - 320 AAA_17 PF13207.1 121 0.016 9.8 3.9 1 1 0.0017 0.06 7.9 3.9 2 19 44 61 43 300 0.79 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_23 - 339 AAA_21 PF13304.1 303 1.2e-15 51.9 0.1 1 2 1.1e-05 0.00064 13.4 0.0 2 25 39 64 38 89 0.76 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 AAA_21 PF13304.1 303 1.2e-15 51.9 0.1 2 2 9e-13 5.4e-11 36.6 0.0 227 300 147 218 88 221 0.84 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_22 - 320 AAA_21 PF13304.1 303 1.6e-12 41.7 2.8 1 1 2.9e-13 1.7e-11 38.3 0.9 3 299 45 215 44 219 0.95 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 12_3 - 714 AAA_21 PF13304.1 303 1.7e-09 31.7 5.6 1 1 2.8e-11 1.7e-09 31.7 5.6 3 300 509 675 507 678 0.84 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_23 - 339 Miro PF08477.8 119 4.8e-05 17.6 0.2 1 1 7.4e-07 0.00013 16.2 0.1 3 51 40 84 39 106 0.80 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 MobB PF03205.9 140 0.00018 14.9 0.0 1 1 4e-06 0.00036 14.0 0.0 2 48 38 83 37 124 0.72 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 12_3 - 714 MobB PF03205.9 140 0.00094 12.6 0.1 1 1 2.6e-05 0.0023 11.4 0.1 3 23 508 528 506 538 0.90 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 4_8 - 1561 Helicase_C PF00271.26 78 8.8e-09 28.9 0.0 1 1 1.6e-10 2.9e-08 27.3 0.0 13 77 522 591 512 592 0.90 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 6_3 - 270 ArsA_ATPase PF02374.10 305 2.4e-14 46.8 0.4 1 1 5.1e-16 4.6e-14 45.8 0.0 5 137 6 132 1 137 0.79 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 2_7 - 281 ArsA_ATPase PF02374.10 305 7.2e-09 28.8 0.3 1 1 4.1e-10 3.7e-08 26.4 0.3 9 137 34 156 27 159 0.72 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 1_23 - 339 PhoH PF02562.11 205 4.3e-05 16.5 0.0 1 2 5.8e-06 0.001 12.0 0.0 16 70 33 91 19 127 0.67 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 PhoH PF02562.11 205 4.3e-05 16.5 0.0 2 2 0.0058 1 2.2 0.0 92 117 297 322 258 326 0.81 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 4_2 - 359 Zeta_toxin PF06414.7 201 0.002 10.9 0.0 1 1 2.2e-05 0.0039 10.0 0.0 17 50 140 174 128 176 0.85 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 10_8 - 450 NAD_binding_8 PF13450.1 68 1.6e-05 18.6 0.9 1 2 0.00056 0.1 6.5 0.2 1 28 10 37 10 45 0.91 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 NAD_binding_8 PF13450.1 68 1.6e-05 18.6 0.9 2 2 3.8e-05 0.0068 10.2 0.0 1 28 167 194 167 197 0.93 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 F420_oxidored PF03807.12 96 0.0026 11.9 1.4 1 2 0.0013 0.24 5.6 0.1 4 32 10 35 7 40 0.86 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 F420_oxidored PF03807.12 96 0.0026 11.9 1.4 2 2 0.0043 0.77 4.0 0.0 2 29 165 189 164 193 0.88 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 FAD_binding_3 PF01494.14 356 1.3e-05 18.1 0.2 1 2 4.6e-05 0.0083 8.9 0.1 3 33 7 37 5 42 0.90 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 FAD_binding_3 PF01494.14 356 1.3e-05 18.1 0.2 2 2 0.00025 0.046 6.4 0.0 5 31 166 192 164 200 0.91 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_23 - 339 SMC_N PF02463.14 220 2.5e-10 33.6 0.1 1 1 1.1e-11 6.3e-10 32.3 0.1 26 213 38 231 27 238 0.83 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_22 - 320 SMC_N PF02463.14 220 1e-07 25.1 0.5 1 1 3.1e-09 1.9e-07 24.3 0.5 26 213 43 229 30 235 0.76 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 12_3 - 714 SMC_N PF02463.14 220 0.00016 14.7 3.4 1 2 0.012 0.71 2.7 0.1 27 41 508 522 477 529 0.84 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 12_3 - 714 SMC_N PF02463.14 220 0.00016 14.7 3.4 2 2 2.1e-05 0.0013 11.7 0.1 136 209 616 684 541 692 0.81 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 2_7 - 281 VirC1 PF07015.6 231 4.3e-06 19.7 0.4 1 2 1.3e-06 0.00012 14.9 0.0 3 47 27 71 25 96 0.77 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_7 - 281 VirC1 PF07015.6 231 4.3e-06 19.7 0.4 2 2 0.0063 0.57 2.9 0.1 82 141 144 204 133 212 0.84 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 6_3 - 270 VirC1 PF07015.6 231 3.4e-05 16.7 0.0 1 1 6.3e-07 5.6e-05 16.0 0.0 1 46 1 46 1 80 0.89 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 2_7 - 281 Fer4_NifH PF00142.13 273 8.7e-06 18.8 0.5 1 1 1.6e-07 1.4e-05 18.1 0.1 8 52 34 78 31 112 0.78 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 6_3 - 270 Fer4_NifH PF00142.13 273 0.00014 14.8 0.4 1 2 0.0012 0.1 5.4 0.0 8 41 10 43 3 58 0.87 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 6_3 - 270 Fer4_NifH PF00142.13 273 0.00014 14.8 0.4 2 2 0.0003 0.026 7.3 0.1 186 240 195 251 182 268 0.79 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 1_23 - 339 AAA_16 PF13191.1 185 3e-05 17.8 0.7 1 1 5.6e-07 5e-05 17.1 0.7 19 45 31 57 23 245 0.92 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 12_3 - 714 AAA_16 PF13191.1 185 0.00041 14.1 0.0 1 1 9e-06 0.0008 13.1 0.0 27 57 508 538 499 659 0.81 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_23 - 339 AAA_23 PF13476.1 202 0.00011 16.2 0.1 1 1 2.7e-06 0.00025 15.1 0.1 15 40 29 57 20 95 0.80 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 9_6 - 161 AAA_23 PF13476.1 202 0.0018 12.3 10.0 1 1 2.5e-05 0.0022 12.0 10.0 90 198 40 154 5 158 0.44 # 3541 # 4023 # 1 # ID=9_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 12_3 - 714 AAA_18 PF13238.1 129 1.4e-05 19.1 0.1 1 1 1.8e-06 6.4e-05 17.0 0.0 1 30 508 542 508 602 0.79 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_22 - 320 AAA_18 PF13238.1 129 2.7e-05 18.2 0.5 1 1 1.7e-06 5.9e-05 17.1 0.1 1 72 44 130 44 150 0.68 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_23 - 339 AAA_18 PF13238.1 129 0.00056 14.0 1.7 1 1 8.3e-05 0.003 11.6 0.1 2 19 40 57 39 90 0.78 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 4_2 - 359 AAA_18 PF13238.1 129 0.0015 12.5 0.0 1 1 7.4e-05 0.0026 11.8 0.0 1 83 142 244 142 266 0.61 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 6_3 - 270 AAA_18 PF13238.1 129 0.0024 11.9 1.1 1 1 0.0003 0.011 9.8 0.3 8 69 12 98 11 158 0.52 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 1_23 - 339 AAA_13 PF13166.1 712 0.00045 12.5 0.1 1 2 0.0052 0.47 2.5 0.0 21 40 41 60 33 90 0.77 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 AAA_13 PF13166.1 712 0.00045 12.5 0.1 2 2 0.00012 0.011 7.9 0.0 527 579 174 225 168 253 0.89 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 12_2 - 457 AAA_13 PF13166.1 712 0.0012 11.0 38.5 1 2 9.6e-05 0.0086 8.2 14.6 339 458 73 192 45 201 0.93 # 399 # 1769 # -1 # ID=12_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 12_2 - 457 AAA_13 PF13166.1 712 0.0012 11.0 38.5 2 2 7.9e-05 0.007 8.5 15.9 343 457 209 318 195 325 0.83 # 399 # 1769 # -1 # ID=12_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_7 - 281 CbiA PF01656.18 195 6.5e-31 100.9 0.1 1 1 1.8e-32 7.8e-31 100.7 0.1 2 193 29 245 28 247 0.83 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 6_3 - 270 CbiA PF01656.18 195 5.9e-28 91.3 0.3 1 2 4.5e-29 2e-27 89.6 0.3 1 178 4 214 4 228 0.72 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 6_3 - 270 CbiA PF01656.18 195 5.9e-28 91.3 0.3 2 2 0.018 0.79 2.8 0.0 132 179 201 245 194 258 0.78 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 1_23 - 339 CbiA PF01656.18 195 0.00016 14.9 1.2 1 2 0.00086 0.039 7.1 0.1 4 21 41 58 38 66 0.84 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 CbiA PF01656.18 195 0.00016 14.9 1.2 2 2 0.0012 0.055 6.6 0.1 111 169 169 226 154 253 0.83 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 4_6 - 256 CbiA PF01656.18 195 0.0013 11.9 0.0 1 1 4.6e-05 0.002 11.2 0.0 112 177 80 142 47 168 0.86 # 3288 # 4055 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.273 6_3 - 270 AAA_14 PF13173.1 128 4.2e-06 20.4 2.0 1 1 1.3e-07 1.1e-05 19.0 0.9 12 109 12 100 6 119 0.65 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 12_3 - 714 AAA_14 PF13173.1 128 0.0014 12.3 3.1 1 1 3.4e-05 0.003 11.2 0.0 5 46 508 550 505 576 0.73 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 18_2 - 67 CSD PF00313.17 66 1.6e-33 108.1 1.5 1 1 1.9e-35 1.7e-33 108.0 1.5 2 65 3 65 2 66 0.98 # 493 # 693 # -1 # ID=18_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.358 18_3 - 67 CSD PF00313.17 66 4.9e-22 71.3 0.2 1 1 5.9e-24 5.3e-22 71.2 0.2 2 65 3 65 2 66 0.97 # 970 # 1170 # -1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.318 1_23 - 339 AAA_29 PF13555.1 62 3.5e-07 23.4 0.1 1 1 1.1e-08 6.6e-07 22.6 0.1 21 51 34 64 20 68 0.77 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_22 - 320 AAA_29 PF13555.1 62 1.5e-05 18.2 0.4 1 1 5.1e-07 3e-05 17.3 0.4 13 39 32 57 29 62 0.84 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 12_3 - 714 AAA_29 PF13555.1 62 0.0001 15.5 0.1 1 1 5.4e-06 0.00032 14.0 0.0 17 39 500 521 495 531 0.85 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_23 - 339 AAA PF00004.24 132 5.7e-06 20.3 0.3 1 2 4.7e-05 0.0042 11.0 0.0 3 44 41 84 39 108 0.78 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 AAA PF00004.24 132 5.7e-06 20.3 0.3 2 2 0.0014 0.12 6.3 0.0 82 117 146 180 131 195 0.85 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 12_3 - 714 AAA PF00004.24 132 0.0012 12.8 0.0 1 1 7.2e-05 0.0065 10.4 0.0 2 38 509 575 508 672 0.66 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 2_16 - 465 Methyltrn_RNA_2 PF04013.7 199 0.00029 14.1 0.7 1 2 7.2e-06 0.0013 12.0 0.2 31 103 50 121 48 126 0.80 # 9997 # 11391 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.335 2_16 - 465 Methyltrn_RNA_2 PF04013.7 199 0.00029 14.1 0.7 2 2 0.048 8.6 -0.5 0.0 103 143 277 317 241 325 0.69 # 9997 # 11391 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.335 10_8 - 450 Thi4 PF01946.12 230 3.7e-05 16.6 1.0 1 2 7.6e-06 0.0014 11.5 0.5 19 57 7 45 1 130 0.75 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 Thi4 PF01946.12 230 3.7e-05 16.6 1.0 2 2 0.0025 0.44 3.3 0.0 9 47 155 192 146 194 0.76 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 3_9 - 175 ThiS PF02597.15 77 0.017 9.3 9.7 1 2 0.0001 0.018 9.3 0.1 20 71 4 50 1 51 0.85 # 5625 # 6149 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.316 3_9 - 175 ThiS PF02597.15 77 0.017 9.3 9.7 2 2 0.081 15 -0.1 6.3 12 40 63 98 52 167 0.82 # 5625 # 6149 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.316 1_22 - 320 Sigma54_activat PF00158.21 168 0.00055 13.2 0.3 1 2 9.1e-05 0.016 8.4 0.1 19 54 38 73 23 88 0.82 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_22 - 320 Sigma54_activat PF00158.21 168 0.00055 13.2 0.3 2 2 0.0047 0.85 2.8 0.0 78 118 155 198 149 230 0.83 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 10_8 - 450 Pyr_redox_3 PF13738.1 203 1.1e-05 19.4 0.0 1 2 1.1e-06 0.0002 15.2 0.0 75 195 72 190 9 195 0.63 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 Pyr_redox_3 PF13738.1 203 1.1e-05 19.4 0.0 2 2 0.021 3.8 1.2 0.0 114 147 233 266 202 301 0.70 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_22 - 320 MMR_HSR1 PF01926.18 116 6.3e-05 16.7 0.2 1 1 1.5e-06 0.00013 15.6 0.1 2 61 44 147 43 208 0.68 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_23 - 339 MMR_HSR1 PF01926.18 116 0.0019 11.9 0.6 1 1 3.6e-05 0.0032 11.2 0.6 2 21 39 58 38 247 0.89 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 4_8 - 1561 N6_Mtase PF02384.11 311 1.1e-11 38.0 0.2 1 1 1.4e-13 2.5e-11 36.9 0.2 4 154 834 1031 831 1096 0.83 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 1_23 - 339 DUF258 PF03193.11 161 1.7e-05 17.8 0.1 1 1 4.7e-07 2.8e-05 17.1 0.1 21 62 21 63 2 90 0.75 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 12_3 - 714 DUF258 PF03193.11 161 0.00012 15.1 0.0 1 1 4.1e-06 0.00024 14.0 0.0 13 59 481 529 471 597 0.81 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_22 - 320 DUF258 PF03193.11 161 0.00034 13.6 0.2 1 1 1e-05 0.00061 12.7 0.2 33 65 38 71 17 93 0.80 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 6_3 - 270 AAA_31 PF13614.1 157 3.7e-17 56.4 0.0 1 1 1.7e-18 1.5e-16 54.4 0.0 2 151 3 154 2 159 0.86 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 2_7 - 281 AAA_31 PF13614.1 157 1.2e-08 28.8 0.6 1 1 5.2e-10 4.6e-08 26.9 0.5 8 152 33 179 27 184 0.77 # 3541 # 4383 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 12_3 - 714 AAA_33 PF13671.1 143 0.00016 15.3 0.1 1 1 3.4e-06 0.0003 14.4 0.1 2 21 508 527 508 541 0.92 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_23 - 339 AAA_33 PF13671.1 143 0.00021 14.9 0.0 1 1 4.5e-06 0.0004 14.0 0.0 1 22 38 59 38 166 0.71 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 6_3 - 270 KTI12 PF08433.5 270 0.00019 14.4 0.0 1 2 3.3e-06 0.0006 12.8 0.0 12 50 13 58 10 85 0.78 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 6_3 - 270 KTI12 PF08433.5 270 0.00019 14.4 0.0 2 2 0.084 15 -1.7 0.0 10 21 178 189 177 208 0.88 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 4_8 - 1561 Methyltransf_26 PF13659.1 117 9.4e-11 35.5 0.0 1 1 2.5e-12 2.2e-10 34.3 0.0 2 116 889 1077 888 1078 0.77 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 16_1 - 184 Methyltransf_26 PF13659.1 117 0.0016 12.2 0.0 1 1 2.3e-05 0.002 11.9 0.0 62 114 105 172 40 175 0.79 # 107 # 658 # -1 # ID=16_1;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.286 10_8 - 450 NAD_Gly3P_dh_N PF01210.18 157 3.7e-05 17.2 0.0 1 2 0.00025 0.045 7.2 0.1 4 29 10 35 7 78 0.93 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 NAD_Gly3P_dh_N PF01210.18 157 3.7e-05 17.2 0.0 2 2 0.00018 0.032 7.7 0.0 2 28 165 191 164 252 0.90 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 2-Hacid_dh_C PF02826.14 178 8.2e-06 18.8 0.0 1 2 0.0018 0.31 3.9 0.1 41 68 10 37 4 41 0.89 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 2-Hacid_dh_C PF02826.14 178 8.2e-06 18.8 0.0 2 2 6e-06 0.0011 11.9 0.0 38 70 164 196 146 214 0.85 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 XdhC_C PF13478.1 136 0.00063 13.8 0.0 1 2 0.011 2.1 2.4 0.0 2 31 9 38 9 97 0.86 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 XdhC_C PF13478.1 136 0.00063 13.8 0.0 2 2 0.0001 0.018 9.1 0.0 1 49 165 214 165 236 0.85 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 9_6 - 161 Ribosomal_S15 PF00312.17 83 0.00048 13.6 3.4 1 1 9.5e-06 0.0017 11.9 3.4 22 66 108 158 92 160 0.76 # 3541 # 4023 # 1 # ID=9_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 18_2 - 67 OB_RNB PF08206.6 58 0.00083 12.6 0.9 1 1 1.1e-05 0.001 12.3 0.9 7 24 12 28 4 58 0.86 # 493 # 693 # -1 # ID=18_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.358 18_3 - 67 OB_RNB PF08206.6 58 0.0012 12.1 1.2 1 1 2.2e-05 0.002 11.4 1.2 7 42 12 51 7 65 0.68 # 970 # 1170 # -1 # ID=18_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.318 4_2 - 359 FtsK_SpoIIIE PF01580.13 205 1.3e-10 34.8 0.0 1 1 5.2e-11 9.2e-09 28.7 0.0 26 204 126 283 119 284 0.79 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 11_3 - 134 eIF-5a PF01287.15 69 0.0039 10.9 4.3 1 2 7.6e-05 0.014 9.2 1.0 21 55 1 35 1 39 0.88 # 1283 # 1684 # 1 # ID=11_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 11_3 - 134 eIF-5a PF01287.15 69 0.0039 10.9 4.3 2 2 0.0097 1.7 2.4 0.1 21 47 102 127 97 131 0.78 # 1283 # 1684 # 1 # ID=11_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 320 ABC_tran PF00005.22 137 5.7e-35 114.3 0.1 1 1 2.3e-36 1e-34 113.5 0.1 2 136 32 182 31 183 0.93 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 12_3 - 714 ABC_tran PF00005.22 137 1.9e-34 112.7 0.0 1 1 8.6e-36 3.9e-34 111.6 0.0 1 137 495 645 495 645 0.87 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 1_23 - 339 ABC_tran PF00005.22 137 2.7e-32 105.7 0.1 1 1 1.3e-33 5.8e-32 104.6 0.0 3 136 28 184 26 185 0.93 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 4_2 - 359 ABC_tran PF00005.22 137 3.3e-06 21.2 0.0 1 1 1.1e-07 5e-06 20.6 0.0 2 78 130 205 129 263 0.70 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 10_8 - 450 K_oxygenase PF13434.1 341 2.7e-05 16.9 0.0 1 2 1.3e-06 0.00023 13.9 0.0 134 212 109 184 89 211 0.77 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 K_oxygenase PF13434.1 341 2.7e-05 16.9 0.0 2 2 0.015 2.7 0.4 0.0 134 160 234 260 223 263 0.79 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 16_1 - 184 Cons_hypoth95 PF03602.10 183 9.8e-06 18.8 0.0 1 2 4.2e-07 7.4e-05 15.9 0.0 108 128 108 127 70 149 0.74 # 107 # 658 # -1 # ID=16_1;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.286 16_1 - 184 Cons_hypoth95 PF03602.10 183 9.8e-06 18.8 0.0 2 2 0.028 5 0.2 0.0 135 157 155 177 135 182 0.81 # 107 # 658 # -1 # ID=16_1;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.286 4_8 - 1561 Eco57I PF07669.6 106 8.2e-06 19.9 0.2 1 1 4.2e-07 7.5e-05 16.8 0.1 5 64 1005 1070 1001 1103 0.74 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 10_8 - 450 UDPG_MGDP_dh_N PF03721.9 185 1.1e-07 25.1 0.2 1 2 0.026 4.7 0.2 0.3 5 32 10 37 7 45 0.86 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 UDPG_MGDP_dh_N PF03721.9 185 1.1e-07 25.1 0.2 2 2 6.6e-09 1.2e-06 21.7 0.0 3 32 165 194 163 215 0.91 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 4_8 - 1561 AAA_19 PF13245.1 76 9.1e-05 15.9 0.0 1 1 1.2e-06 0.00022 14.7 0.0 18 50 195 226 188 239 0.92 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 1_23 - 339 AAA_10 PF12846.2 304 2.5e-06 20.8 0.2 1 2 3.6e-05 0.0016 11.6 0.1 4 21 39 56 37 71 0.85 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 AAA_10 PF12846.2 304 2.5e-06 20.8 0.2 2 2 0.00073 0.033 7.3 0.0 216 268 170 222 131 249 0.74 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 4_2 - 359 AAA_10 PF12846.2 304 2.8e-06 20.6 0.0 1 2 4.3e-06 0.00019 14.6 0.0 3 54 141 192 140 209 0.85 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 4_2 - 359 AAA_10 PF12846.2 304 2.8e-06 20.6 0.0 2 2 0.0086 0.39 3.8 0.0 223 268 236 286 210 303 0.73 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 1_22 - 320 AAA_10 PF12846.2 304 0.00033 13.8 0.5 1 1 4e-05 0.0018 11.4 0.3 6 32 46 73 42 139 0.72 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 12_3 - 714 AAA_10 PF12846.2 304 0.00061 13.0 0.1 1 1 2.9e-05 0.0013 11.9 0.1 5 25 509 529 506 548 0.87 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 10_8 - 450 DAO PF01266.19 358 8.9e-06 18.5 0.1 1 3 0.00098 0.18 4.3 0.0 3 40 9 46 7 107 0.88 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 DAO PF01266.19 358 8.9e-06 18.5 0.1 2 3 0.0001 0.019 7.6 0.0 2 29 165 192 164 195 0.94 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 DAO PF01266.19 358 8.9e-06 18.5 0.1 3 3 0.0022 0.39 3.2 0.0 155 245 211 301 201 346 0.74 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 4_8 - 1561 ResIII PF04851.10 184 5.4e-23 75.5 1.6 1 1 6.5e-25 1.2e-22 74.4 0.3 2 183 167 369 166 370 0.69 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 4_8 - 1561 DEAD PF00270.24 169 1.6e-06 21.4 0.3 1 1 3.5e-07 6.2e-05 16.3 0.0 17 162 190 368 170 372 0.59 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 10_8 - 450 Pyr_redox PF00070.22 80 7.6e-22 71.3 1.6 1 2 0.0028 0.49 4.6 0.3 3 31 9 37 7 44 0.91 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 Pyr_redox PF00070.22 80 7.6e-22 71.3 1.6 2 2 4.5e-22 8.1e-20 64.8 0.0 1 72 164 235 164 249 0.94 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 4_2 - 359 TrwB_AAD_bind PF10412.4 386 0.00057 12.3 0.0 1 1 4.7e-06 0.00083 11.7 0.0 14 77 138 200 129 212 0.83 # 936 # 2012 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.362 4_8 - 1561 AAA_11 PF13086.1 236 0.00059 13.2 3.5 1 3 9.4e-06 0.0017 11.7 0.0 7 63 178 228 168 255 0.80 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 4_8 - 1561 AAA_11 PF13086.1 236 0.00059 13.2 3.5 2 3 0.066 12 -0.9 0.0 173 203 301 333 297 340 0.72 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 4_8 - 1561 AAA_11 PF13086.1 236 0.00059 13.2 3.5 3 3 0.082 15 -1.2 0.2 144 166 706 728 570 834 0.53 # 5225 # 9907 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 1_23 - 339 Sigma54_activ_2 PF14532.1 138 0.0003 14.6 0.0 1 2 8.9e-05 0.016 9.0 0.0 20 50 35 65 21 88 0.79 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 Sigma54_activ_2 PF14532.1 138 0.0003 14.6 0.0 2 2 0.012 2.1 2.1 0.0 73 96 289 312 269 320 0.85 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 9_6 - 161 AAA_32 PF13654.1 509 0.00043 12.7 4.0 1 1 2.7e-06 0.00048 12.6 4.0 128 242 46 157 12 159 0.80 # 3541 # 4023 # 1 # ID=9_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 16_1 - 184 MethyltransfD12 PF02086.10 260 6.1e-06 19.5 3.1 1 1 5.8e-08 1e-05 18.8 3.1 100 214 37 147 5 167 0.66 # 107 # 658 # -1 # ID=16_1;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.286 10_8 - 450 TrkA_N PF02254.13 116 4.2e-06 20.5 0.2 1 2 3.4e-06 0.00061 13.5 0.1 2 30 9 37 8 40 0.90 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 TrkA_N PF02254.13 116 4.2e-06 20.5 0.2 2 2 0.0023 0.42 4.4 0.0 3 35 167 199 165 225 0.75 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 10_8 - 450 AlaDh_PNT_C PF01262.16 168 0.0011 12.3 0.0 1 1 1.4e-05 0.0026 11.1 0.0 19 53 161 195 152 218 0.85 # 3199 # 4548 # 1 # ID=10_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 6_3 - 270 AAA_24 PF13479.1 213 5e-05 16.7 0.1 1 1 7.4e-07 0.00013 15.3 0.1 11 75 10 128 6 129 0.77 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 1_23 - 339 NACHT PF05729.7 166 0.00047 13.6 0.0 1 1 5.1e-06 0.00091 12.6 0.0 2 21 38 57 37 67 0.87 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 AAA_25 PF13481.1 194 2.9e-06 20.5 0.1 1 2 3.8e-07 3.4e-05 17.0 0.0 29 54 32 57 4 60 0.80 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_23 - 339 AAA_25 PF13481.1 194 2.9e-06 20.5 0.1 2 2 0.029 2.6 1.1 0.0 134 188 166 215 126 216 0.66 # 22969 # 23985 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_22 - 320 AAA_25 PF13481.1 194 0.0012 12.0 0.1 1 2 0.00019 0.017 8.2 0.0 30 50 38 58 30 107 0.91 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_22 - 320 AAA_25 PF13481.1 194 0.0012 12.0 0.1 2 2 0.024 2.1 1.4 0.0 165 188 190 213 161 214 0.80 # 22013 # 22972 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 12_3 - 714 AAA_5 PF07728.9 139 0.00081 12.9 0.0 1 1 2.9e-05 0.0052 10.2 0.0 2 24 508 533 507 573 0.80 # 1785 # 3926 # -1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.355 6_3 - 270 APS_kinase PF01583.15 157 0.0012 12.2 0.0 1 2 4.4e-05 0.0078 9.6 0.0 10 41 10 41 2 91 0.73 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 6_3 - 270 APS_kinase PF01583.15 157 0.0012 12.2 0.0 2 2 0.054 9.7 -0.5 0.0 69 89 135 155 132 167 0.86 # 1713 # 2522 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/dd0ae9f5-7dab-47a6-bc81-0bf49d9a040c # Target file: checkm_output/bins/pGCA_000014545.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000014545.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/dd0ae9f5-7dab-47a6-bc81-0bf49d9a040c checkm_output/bins/pGCA_000014545.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:38:53 2020 # [ok]