# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_18 - 577 Mg_chelatase PF01078.16 207 0.00034 12.2 0.0 1 2 0.002 0.14 3.7 0.0 25 62 23 60 20 84 0.77 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 Mg_chelatase PF01078.16 207 0.00034 12.2 0.0 2 2 0.00054 0.039 5.5 0.0 25 57 335 367 322 387 0.83 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_4 - 373 Saccharop_dh PF03435.13 386 0.00014 13.3 0.1 1 1 3e-06 0.00021 12.7 0.1 1 38 6 41 6 60 0.84 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_18 - 577 Thymidylate_kin PF02223.12 186 8.2e-07 21.0 0.2 1 2 0.0002 0.015 7.1 0.0 3 33 27 58 25 79 0.81 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 Thymidylate_kin PF02223.12 186 8.2e-07 21.0 0.2 2 2 1.2e-05 0.00088 11.1 0.0 5 34 341 371 339 425 0.77 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 IstB_IS21 PF01695.12 178 1.6e-10 33.1 0.0 1 2 4e-07 2.9e-05 16.0 0.0 40 85 13 58 1 146 0.72 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 IstB_IS21 PF01695.12 178 1.6e-10 33.1 0.0 2 2 1.6e-06 0.00011 14.0 0.0 50 84 335 369 321 391 0.89 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 MipZ PF09140.6 261 2.8e-15 48.5 5.4 1 3 9.7e-07 3.5e-05 15.4 0.1 8 39 27 58 22 84 0.84 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 MipZ PF09140.6 261 2.8e-15 48.5 5.4 2 3 0.00045 0.016 6.6 0.0 78 130 125 181 99 185 0.66 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 MipZ PF09140.6 261 2.8e-15 48.5 5.4 3 3 5e-10 1.8e-08 26.2 0.4 6 111 337 457 332 468 0.63 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_26 - 273 MipZ PF09140.6 261 3.5e-06 18.6 0.1 1 1 6.4e-07 2.3e-05 16.0 0.1 2 45 11 54 10 162 0.86 # 21257 # 22075 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 1_26 - 273 YhjQ PF06564.7 244 5.8e-11 34.6 0.0 1 1 2.4e-12 8.6e-11 34.0 0.0 4 152 12 167 9 173 0.81 # 21257 # 22075 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 1_18 - 577 YhjQ PF06564.7 244 9.7e-09 27.3 0.6 1 2 1.5e-05 0.00053 11.8 0.0 10 55 28 73 22 197 0.74 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 YhjQ PF06564.7 244 9.7e-09 27.3 0.6 2 2 1.5e-05 0.00053 11.8 0.0 10 41 340 371 335 389 0.88 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_4 - 373 3HCDH_N PF02737.13 180 3.3e-05 16.0 0.0 1 1 1.5e-06 5.5e-05 15.3 0.0 2 38 6 42 5 79 0.83 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_18 - 577 3HCDH_N PF02737.13 180 0.00016 13.8 0.1 1 2 0.0049 0.17 3.9 0.0 5 34 31 60 29 99 0.83 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 3HCDH_N PF02737.13 180 0.00016 13.8 0.1 2 2 0.00084 0.03 6.4 0.0 5 75 343 412 341 439 0.74 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_17 - 555 Pyr_redox_2 PF07992.9 201 1e-36 119.1 0.7 1 1 5.5e-38 2e-36 118.2 0.7 1 199 3 287 3 289 0.91 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 4_4 - 373 Pyr_redox_2 PF07992.9 201 8e-07 21.5 1.1 1 1 2.3e-07 8.5e-06 18.2 1.0 1 38 5 45 5 236 0.84 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_18 - 577 NB-ARC PF00931.17 287 1.7e-09 29.3 0.5 1 2 1.3e-06 9.3e-05 13.8 0.0 9 40 9 41 2 76 0.84 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 NB-ARC PF00931.17 287 1.7e-09 29.3 0.5 2 2 2.1e-06 0.00015 13.1 0.1 16 40 329 353 319 369 0.78 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_22 PF13401.1 131 5.3e-06 19.1 4.1 1 2 0.00038 0.027 7.1 0.0 7 56 23 67 18 77 0.79 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_22 PF13401.1 131 5.3e-06 19.1 4.1 2 2 5.7e-05 0.0041 9.7 2.0 10 122 338 500 333 505 0.56 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 DUF1611 PF07755.6 301 6.7e-05 14.0 1.4 1 2 0.0022 0.16 3.0 0.0 124 156 31 63 22 68 0.92 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 DUF1611 PF07755.6 301 6.7e-05 14.0 1.4 2 2 3.1e-05 0.0023 9.0 0.1 101 152 321 371 311 385 0.86 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 ATP_bind_1 PF03029.12 238 3.5e-07 22.4 8.6 1 2 8.2e-06 0.00059 11.8 1.1 2 37 26 61 25 157 0.96 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 ATP_bind_1 PF03029.12 238 3.5e-07 22.4 8.6 2 2 6.1e-06 0.00044 12.2 0.4 2 98 338 451 337 489 0.76 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 SRP54 PF00448.17 196 4.9e-13 41.4 11.3 1 4 4.7e-08 3.4e-06 19.0 0.2 3 38 22 57 20 96 0.90 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 SRP54 PF00448.17 196 4.9e-13 41.4 11.3 2 4 0.0092 0.66 1.8 0.0 76 92 140 156 90 165 0.76 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 SRP54 PF00448.17 196 4.9e-13 41.4 11.3 3 4 2e-08 1.4e-06 20.3 1.3 4 41 335 372 332 420 0.80 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 SRP54 PF00448.17 196 4.9e-13 41.4 11.3 4 4 0.002 0.14 4.0 0.1 79 108 439 474 425 493 0.64 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_7 - 334 NAD_binding_7 PF13241.1 103 9.5e-05 15.1 0.1 1 1 3.9e-06 0.00028 13.6 0.0 4 45 21 90 19 157 0.57 # 4735 # 5736 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.341 1_18 - 577 AAA_17 PF13207.1 121 1.9e-09 30.9 0.4 1 2 9.6e-05 0.0035 10.7 0.0 3 32 24 58 23 253 0.78 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_17 PF13207.1 121 1.9e-09 30.9 0.4 2 2 7.1e-07 2.5e-05 17.5 0.0 6 81 339 424 335 556 0.61 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 3_2 - 225 AAA_17 PF13207.1 121 8.8e-06 19.0 1.5 1 1 3.8e-07 1.4e-05 18.4 1.4 23 113 24 122 20 182 0.83 # 1366 # 2040 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_18 - 577 MobB PF03205.9 140 1.7e-10 33.2 0.6 1 2 7.4e-07 5.3e-05 15.4 0.1 3 38 23 57 21 62 0.90 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 MobB PF03205.9 140 1.7e-10 33.2 0.6 2 2 6.8e-07 4.9e-05 15.5 0.1 6 47 338 377 334 417 0.80 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 LpxK PF02606.9 326 5.5e-05 14.6 1.2 1 2 0.00037 0.027 5.8 0.0 46 72 29 55 27 68 0.94 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 LpxK PF02606.9 326 5.5e-05 14.6 1.2 2 2 0.00015 0.011 7.1 0.3 46 69 341 364 337 384 0.94 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 CTP_synth_N PF06418.9 276 1.9e-05 16.3 5.5 1 3 9.6e-06 0.00069 11.1 0.0 1 45 20 62 20 69 0.91 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 CTP_synth_N PF06418.9 276 1.9e-05 16.3 5.5 2 3 0.094 6.7 -1.9 0.2 192 264 228 301 211 309 0.59 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 CTP_synth_N PF06418.9 276 1.9e-05 16.3 5.5 3 3 0.00027 0.02 6.4 0.0 3 47 334 376 332 384 0.80 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 ArsA_ATPase PF02374.10 305 1.6e-107 351.5 20.9 1 3 4e-71 1.4e-69 226.8 1.4 1 300 20 301 20 305 0.95 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 ArsA_ATPase PF02374.10 305 1.6e-107 351.5 20.9 2 3 7.5e-33 2.7e-31 101.1 6.8 2 157 333 474 332 486 0.90 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 ArsA_ATPase PF02374.10 305 1.6e-107 351.5 20.9 3 3 7.5e-12 2.7e-10 32.1 0.8 182 274 469 561 463 569 0.89 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_26 - 273 ArsA_ATPase PF02374.10 305 1.9e-10 32.7 0.3 1 1 1.6e-11 5.9e-10 31.0 0.1 4 137 12 142 9 146 0.66 # 21257 # 22075 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 1_18 - 577 PhoH PF02562.11 205 3.1e-10 32.0 0.0 1 2 2.9e-06 0.00021 13.0 0.0 14 62 15 63 6 156 0.87 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 PhoH PF02562.11 205 3.1e-10 32.0 0.0 2 2 3e-07 2.1e-05 16.2 0.1 12 102 323 419 313 425 0.84 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 T2SE PF00437.15 272 1.5e-07 23.0 1.9 1 2 0.0001 0.0074 7.6 0.0 125 166 17 58 4 80 0.75 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 T2SE PF00437.15 272 1.5e-07 23.0 1.9 2 2 1e-06 7.4e-05 14.1 0.7 22 176 209 382 197 402 0.76 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_26 PF13500.1 199 4.7e-05 15.5 1.6 1 3 0.0027 0.2 3.7 0.0 11 33 30 52 21 121 0.79 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_26 PF13500.1 199 4.7e-05 15.5 1.6 2 3 0.033 2.4 0.1 0.0 131 172 212 253 202 292 0.74 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_26 PF13500.1 199 4.7e-05 15.5 1.6 3 3 0.00022 0.016 7.2 0.9 11 32 342 363 334 520 0.73 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_7 - 334 Shikimate_DH PF01488.15 135 0.00016 14.2 0.1 1 1 4.3e-06 0.00031 13.3 0.1 9 56 21 68 15 124 0.73 # 4735 # 5736 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.341 1_17 - 555 NAD_binding_8 PF13450.1 68 2.6e-06 19.9 0.0 1 2 6.9e-06 0.00025 13.6 0.0 1 32 6 39 6 43 0.92 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 NAD_binding_8 PF13450.1 68 2.6e-06 19.9 0.0 2 2 0.01 0.37 3.4 0.0 1 21 157 177 157 180 0.85 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 4_4 - 373 NAD_binding_8 PF13450.1 68 0.00014 14.3 0.1 1 1 8.2e-06 0.0003 13.3 0.1 1 29 8 36 8 66 0.82 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_4 - 373 F420_oxidored PF03807.12 96 0.00067 12.6 0.1 1 1 1.7e-05 0.0013 11.7 0.1 3 38 7 38 5 79 0.78 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_4 - 373 FAD_binding_3 PF01494.14 356 7.7e-05 14.2 0.3 1 1 4.4e-06 0.00016 13.2 0.3 2 43 4 46 3 50 0.85 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_7 - 334 FAD_binding_3 PF01494.14 356 0.00077 10.9 0.4 1 1 3.3e-05 0.0012 10.4 0.4 1 30 24 53 24 63 0.87 # 4735 # 5736 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.341 1_18 - 577 VirC1 PF07015.6 231 1.7e-08 26.2 0.0 1 2 1.1e-05 0.00038 12.0 0.0 9 44 27 62 20 96 0.89 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 VirC1 PF07015.6 231 1.7e-08 26.2 0.0 2 2 1.3e-05 0.00047 11.7 0.0 9 42 339 372 334 419 0.90 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_26 - 273 VirC1 PF07015.6 231 6.4e-05 14.5 0.0 1 2 1.2e-05 0.00044 11.8 0.0 2 39 10 48 9 61 0.74 # 21257 # 22075 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 1_26 - 273 VirC1 PF07015.6 231 6.4e-05 14.5 0.0 2 2 0.028 1 0.8 0.0 82 111 130 160 85 255 0.79 # 21257 # 22075 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 1_18 - 577 Fer4_NifH PF00142.13 273 2.1e-13 42.5 1.2 1 2 4.3e-08 1.6e-06 19.9 0.0 5 41 25 61 21 75 0.89 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 Fer4_NifH PF00142.13 273 2.1e-13 42.5 1.2 2 2 6.4e-08 2.3e-06 19.4 0.0 6 42 338 374 333 408 0.80 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_26 - 273 Fer4_NifH PF00142.13 273 2.3e-05 16.1 0.8 1 1 1.1e-06 3.9e-05 15.4 0.0 8 47 18 58 11 84 0.87 # 21257 # 22075 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 1_18 - 577 Arch_ATPase PF01637.13 234 9.1e-08 24.5 1.0 1 2 0.0011 0.08 5.0 0.0 21 81 21 77 6 160 0.70 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 Arch_ATPase PF01637.13 234 9.1e-08 24.5 1.0 2 2 2.8e-07 2e-05 16.8 0.4 9 125 321 450 318 501 0.74 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_16 PF13191.1 185 2.1e-08 26.8 0.0 1 2 2.5e-05 0.0018 10.7 0.0 26 142 22 139 16 166 0.69 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_16 PF13191.1 185 2.1e-08 26.8 0.0 2 2 3.2e-06 0.00023 13.6 0.0 20 76 328 387 317 478 0.79 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_18 PF13238.1 129 1.7e-07 24.1 8.0 1 3 3.3e-05 0.0024 10.6 0.0 2 23 24 59 23 107 0.70 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_18 PF13238.1 129 1.7e-07 24.1 8.0 2 3 0.0094 0.68 2.7 1.1 35 89 273 325 232 333 0.79 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_18 PF13238.1 129 1.7e-07 24.1 8.0 3 3 1.1e-05 0.00082 12.2 0.2 5 59 339 400 336 456 0.56 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 CbiA PF01656.18 195 7e-39 125.6 1.5 1 2 5.8e-22 2.1e-20 65.4 0.1 4 179 25 269 22 288 0.73 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 CbiA PF01656.18 195 7e-39 125.6 1.5 2 2 5.2e-20 1.9e-18 59.0 0.2 3 147 336 524 334 571 0.69 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_26 - 273 CbiA PF01656.18 195 2.9e-30 97.5 0.1 1 1 9.9e-32 3.6e-30 97.3 0.1 1 193 12 233 12 235 0.81 # 21257 # 22075 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 1_18 - 577 KaiC PF06745.8 227 8.1e-09 27.3 1.3 1 2 1.5e-05 0.0011 10.5 0.0 21 60 22 60 5 113 0.83 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 KaiC PF06745.8 227 8.1e-09 27.3 1.3 2 2 1.5e-06 0.00011 13.8 1.3 25 162 338 504 321 517 0.77 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_14 PF13173.1 128 0.00013 14.4 5.8 1 2 0.001 0.072 5.5 0.0 4 44 22 63 20 100 0.71 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_14 PF13173.1 128 0.00013 14.4 5.8 2 2 5.9e-05 0.0042 9.4 0.3 11 85 341 405 332 501 0.77 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_4 - 373 HI0933_like PF03486.9 409 9.5e-08 23.2 0.3 1 2 5.4e-05 0.002 9.0 0.1 1 60 4 62 4 78 0.77 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_4 - 373 HI0933_like PF03486.9 409 9.5e-08 23.2 0.3 2 2 4.7e-06 0.00017 12.5 0.0 89 165 134 209 91 214 0.74 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_17 - 555 HI0933_like PF03486.9 409 0.00013 13.0 0.1 1 2 0.00092 0.033 5.0 0.0 2 34 3 37 2 42 0.81 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 HI0933_like PF03486.9 409 0.00013 13.0 0.1 2 2 0.0012 0.042 4.7 0.0 122 165 71 116 65 131 0.72 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 208 Ribosomal_S20p PF01649.13 84 0.0013 11.6 4.2 1 2 0.0001 0.0074 9.2 0.1 10 55 71 116 67 124 0.84 # 24264 # 24887 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.308 1_28 - 208 Ribosomal_S20p PF01649.13 84 0.0013 11.6 4.2 2 2 0.0083 0.6 3.1 0.1 54 80 174 200 162 205 0.77 # 24264 # 24887 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.308 3_3 - 67 CSD PF00313.17 66 3e-32 102.7 2.8 1 1 4.5e-34 3.2e-32 102.6 2.8 2 65 3 65 2 66 0.97 # 2102 # 2302 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 1_18 - 577 AAA_29 PF13555.1 62 0.00018 13.5 1.0 1 2 0.00016 0.011 7.7 0.1 24 44 21 41 10 53 0.78 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_29 PF13555.1 62 0.00018 13.5 1.0 2 2 0.0028 0.2 3.7 0.1 26 47 334 356 319 366 0.69 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_4 - 373 FAD_binding_2 PF00890.19 417 6.3e-06 17.6 0.9 1 1 1.4e-07 1e-05 17.0 0.9 1 49 5 52 5 194 0.82 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_18 - 577 AAA PF00004.24 132 8.3e-07 21.7 7.7 1 2 7.7e-05 0.0055 9.4 0.0 2 32 24 59 23 145 0.76 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA PF00004.24 132 8.3e-07 21.7 7.7 2 2 8.9e-05 0.0064 9.2 4.4 4 109 338 503 335 523 0.59 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_4 - 373 Thi4 PF01946.12 230 6.6e-05 14.5 0.3 1 1 2.4e-06 0.00017 13.1 0.2 18 51 4 37 1 61 0.81 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_4 - 373 Strep_67kDa_ant PF06100.6 500 0.0003 11.6 0.1 1 1 6.1e-06 0.00044 11.1 0.1 207 281 69 145 54 181 0.86 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_5 - 67 ThiS PF02597.15 77 1.5e-11 37.1 0.1 1 1 2.4e-13 1.7e-11 36.9 0.1 15 77 9 66 3 66 0.90 # 3769 # 3969 # 1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.294 4_4 - 373 Pyr_redox_3 PF13738.1 203 1.6e-09 30.5 1.7 1 1 4.1e-09 1.5e-07 24.1 1.7 1 137 7 210 7 220 0.75 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_17 - 555 Pyr_redox_3 PF13738.1 203 4.1e-07 22.7 0.1 1 1 8e-08 2.9e-06 19.9 0.0 81 188 56 173 44 183 0.72 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_18 - 577 DUF258 PF03193.11 161 1.8e-06 19.6 1.1 1 2 0.00012 0.0089 7.7 0.1 35 61 20 46 3 61 0.77 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 DUF258 PF03193.11 161 1.8e-06 19.6 1.1 2 2 3.3e-05 0.0024 9.5 0.1 22 62 316 359 308 385 0.77 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_4 - 373 NAD_binding_2 PF03446.10 163 2.9e-05 16.4 0.1 1 1 6.6e-07 4.8e-05 15.7 0.1 3 44 5 46 3 110 0.78 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_26 - 273 AAA_31 PF13614.1 157 2.5e-15 49.2 0.7 1 1 1.8e-16 6.6e-15 47.8 0.7 2 150 11 164 10 171 0.82 # 21257 # 22075 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 1_18 - 577 AAA_31 PF13614.1 157 6.1e-14 44.7 3.3 1 2 1.1e-09 3.8e-08 25.9 0.1 5 134 24 164 21 183 0.77 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_31 PF13614.1 157 6.1e-14 44.7 3.3 2 2 9.2e-07 3.3e-05 16.3 0.3 9 129 340 455 333 465 0.68 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 NTPase_1 PF03266.10 168 4.6e-08 25.4 4.0 1 3 2.4e-06 0.00017 13.7 0.1 2 31 23 52 22 60 0.90 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 NTPase_1 PF03266.10 168 4.6e-08 25.4 4.0 2 3 4.8e-05 0.0034 9.5 0.7 4 30 337 363 334 405 0.81 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 NTPase_1 PF03266.10 168 4.6e-08 25.4 4.0 3 3 0.033 2.4 0.3 0.0 41 99 440 499 433 544 0.75 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_33 PF13671.1 143 3.2e-05 16.3 0.0 1 2 0.0021 0.15 4.4 0.0 3 34 24 60 23 96 0.73 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_33 PF13671.1 143 3.2e-05 16.3 0.0 2 2 9.3e-05 0.0067 8.8 0.0 3 31 336 368 335 413 0.70 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 KTI12 PF08433.5 270 3e-07 22.3 1.8 1 2 2.6e-05 0.0019 9.8 0.0 5 47 24 66 22 78 0.83 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 KTI12 PF08433.5 270 3e-07 22.3 1.8 2 2 1.8e-05 0.0013 10.4 0.2 8 42 339 376 335 416 0.67 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_7 - 334 2-Hacid_dh_C PF02826.14 178 3.6e-06 18.7 0.1 1 1 8e-08 5.7e-06 18.0 0.1 11 69 2 58 1 103 0.77 # 4735 # 5736 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.341 1_18 - 577 AAA_30 PF13604.1 196 4.3e-09 28.6 1.0 1 3 0.00013 0.0093 8.0 0.0 21 54 23 56 17 69 0.87 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_30 PF13604.1 196 4.3e-09 28.6 1.0 2 3 2.2e-07 1.6e-05 17.0 0.1 13 74 327 388 319 410 0.81 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_30 PF13604.1 196 4.3e-09 28.6 1.0 3 3 0.034 2.4 0.1 0.0 45 85 454 494 431 522 0.81 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 3_3 - 67 OB_RNB PF08206.6 58 3.8e-05 15.6 0.6 1 1 7.9e-07 5.7e-05 15.1 0.6 7 25 12 29 4 65 0.86 # 2102 # 2302 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 1_18 - 577 FtsK_SpoIIIE PF01580.13 205 8.6e-05 14.5 0.2 1 2 0.00011 0.0078 8.1 0.0 44 81 26 61 9 71 0.86 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 FtsK_SpoIIIE PF01580.13 205 8.6e-05 14.5 0.2 2 2 0.0028 0.2 3.5 0.0 37 79 331 371 308 387 0.80 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_4 - 373 Lycopene_cycl PF05834.7 374 0.00032 12.1 0.4 1 2 1.3e-05 0.00094 10.5 0.1 1 33 5 35 5 43 0.84 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_4 - 373 Lycopene_cycl PF05834.7 374 0.00032 12.1 0.4 2 2 0.047 3.4 -1.2 0.0 90 127 159 197 141 274 0.57 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_7 - 334 ELFV_dehydrog PF00208.16 244 8.1e-05 14.7 0.1 1 1 2.2e-06 0.00016 13.7 0.1 26 106 18 94 9 123 0.75 # 4735 # 5736 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.341 1_18 - 577 ABC_tran PF00005.22 137 3.4e-05 16.6 10.9 1 2 0.00018 0.013 8.2 2.2 8 80 17 94 9 300 0.83 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 ABC_tran PF00005.22 137 3.4e-05 16.6 10.9 2 2 1.4e-05 0.001 11.8 1.6 13 80 334 408 321 562 0.76 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_17 - 555 K_oxygenase PF13434.1 341 2.8e-08 25.4 0.4 1 2 0.026 1.9 -0.3 0.0 191 223 2 34 1 40 0.80 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 K_oxygenase PF13434.1 341 2.8e-08 25.4 0.4 2 2 2.6e-09 1.9e-07 22.7 0.0 102 231 65 189 63 239 0.77 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_18 - 577 RuvB_N PF05496.7 234 6.3e-06 17.8 0.1 1 2 0.00018 0.013 6.9 0.0 51 81 21 51 12 72 0.80 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 RuvB_N PF05496.7 234 6.3e-06 17.8 0.1 2 2 6.7e-05 0.0048 8.3 0.0 49 128 331 408 323 431 0.74 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_19 PF13245.1 76 1.4e-06 20.5 0.7 1 2 0.00011 0.0082 8.4 0.0 14 50 25 56 18 66 0.87 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_19 PF13245.1 76 1.4e-06 20.5 0.7 2 2 4.6e-05 0.0033 9.7 0.3 17 50 339 368 333 379 0.88 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 Helicase_RecD PF05127.9 177 6.9e-06 18.2 0.6 1 3 0.0022 0.16 4.0 0.0 3 46 26 69 24 154 0.87 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 Helicase_RecD PF05127.9 177 6.9e-06 18.2 0.6 2 3 0.016 1.2 1.2 0.1 18 59 202 263 195 298 0.59 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 Helicase_RecD PF05127.9 177 6.9e-06 18.2 0.6 3 3 4.8e-05 0.0035 9.4 0.1 5 101 340 454 337 483 0.64 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_10 PF12846.2 304 5.4e-08 25.0 0.1 1 2 4.8e-07 3.5e-05 15.8 0.2 3 70 22 95 20 304 0.85 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_10 PF12846.2 304 5.4e-08 25.0 0.1 2 2 0.00025 0.018 6.9 0.0 4 40 335 373 333 422 0.88 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 adh_short_C2 PF13561.1 241 3.7e-06 19.3 0.7 1 2 0.00011 0.0077 8.4 0.0 5 86 33 160 29 189 0.67 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 adh_short_C2 PF13561.1 241 3.7e-06 19.3 0.7 2 2 8e-05 0.0058 8.8 0.1 5 126 345 493 341 515 0.63 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_4 - 373 DAO PF01266.19 358 7.2e-63 205.0 0.0 1 1 2.3e-64 8.1e-63 204.8 0.0 1 358 5 349 5 349 0.94 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_17 - 555 DAO PF01266.19 358 8.2e-07 20.6 0.0 1 4 0.0021 0.075 4.3 0.0 1 33 3 38 3 42 0.93 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 DAO PF01266.19 358 8.2e-07 20.6 0.0 2 4 0.00028 0.01 7.1 0.0 145 210 55 124 41 153 0.78 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 DAO PF01266.19 358 8.2e-07 20.6 0.0 3 4 0.0088 0.32 2.2 0.0 2 25 155 178 154 180 0.79 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 DAO PF01266.19 358 8.2e-07 20.6 0.0 4 4 0.014 0.51 1.5 0.0 153 214 195 259 192 282 0.82 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 4_7 - 334 ThiF PF00899.16 136 3.9e-45 145.5 0.1 1 1 9.2e-47 6.6e-45 144.7 0.1 2 132 24 158 23 161 0.97 # 4735 # 5736 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.341 1_18 - 577 ResIII PF04851.10 184 0.00029 13.2 12.2 1 2 0.00034 0.025 6.8 0.5 29 59 24 56 7 156 0.58 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 ResIII PF04851.10 184 0.00029 13.2 12.2 2 2 1.9e-05 0.0014 10.9 2.4 13 91 321 398 260 452 0.72 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 DUF2075 PF09848.4 352 0.00014 13.3 14.0 1 4 2.4e-05 0.0017 9.7 0.0 3 57 22 76 20 95 0.82 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 DUF2075 PF09848.4 352 0.00014 13.3 14.0 2 4 0.022 1.5 0.0 1.2 64 92 129 156 109 280 0.50 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 DUF2075 PF09848.4 352 0.00014 13.3 14.0 3 4 0.026 1.9 -0.3 0.0 23 55 299 331 293 336 0.82 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 DUF2075 PF09848.4 352 0.00014 13.3 14.0 4 4 6.4e-05 0.0046 8.3 1.7 4 92 335 452 332 505 0.60 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_17 - 555 NAD_binding_9 PF13454.1 156 1.9e-06 20.2 0.3 1 3 0.0011 0.038 6.2 0.0 1 34 5 35 5 44 0.88 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 NAD_binding_9 PF13454.1 156 1.9e-06 20.2 0.3 2 3 0.0037 0.13 4.4 0.0 113 155 69 115 61 116 0.75 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 NAD_binding_9 PF13454.1 156 1.9e-06 20.2 0.3 3 3 0.0028 0.1 4.8 0.1 2 19 157 174 156 184 0.87 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 4_4 - 373 NAD_binding_9 PF13454.1 156 3.9e-06 19.2 0.5 1 2 2e-05 0.00073 11.8 0.1 1 43 7 44 7 61 0.91 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_4 - 373 NAD_binding_9 PF13454.1 156 3.9e-06 19.2 0.5 2 2 0.0019 0.068 5.4 0.1 104 145 159 200 97 208 0.80 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_17 - 555 Pyr_redox PF00070.22 80 1e-12 40.8 0.4 1 3 0.03 1.1 2.3 0.0 1 27 3 29 3 39 0.80 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 Pyr_redox PF00070.22 80 1e-12 40.8 0.4 2 3 0.0038 0.14 5.2 0.0 50 78 67 94 57 100 0.78 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 Pyr_redox PF00070.22 80 1e-12 40.8 0.4 3 3 1.3e-10 4.6e-09 29.1 0.0 2 77 155 228 154 232 0.85 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 4_4 - 373 Pyr_redox PF00070.22 80 4.4e-05 16.3 0.8 1 2 0.00051 0.018 7.9 0.1 2 31 6 35 5 42 0.90 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 4_4 - 373 Pyr_redox PF00070.22 80 4.4e-05 16.3 0.8 2 2 0.0016 0.057 6.4 0.0 44 78 160 194 151 196 0.84 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_18 - 577 ArgK PF03308.11 267 6.6e-13 40.4 0.0 1 2 1.1e-09 7.7e-08 23.8 0.0 30 71 21 62 3 65 0.89 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 ArgK PF03308.11 267 6.6e-13 40.4 0.0 2 2 9.4e-07 6.7e-05 14.2 0.0 32 70 335 373 306 377 0.83 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 PIF1 PF05970.9 364 2.3e-09 29.0 4.0 1 3 5.6e-06 0.0004 11.8 0.0 20 57 18 55 7 64 0.87 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 PIF1 PF05970.9 364 2.3e-09 29.0 4.0 2 3 0.0064 0.46 1.7 0.1 191 235 257 301 243 319 0.79 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 PIF1 PF05970.9 364 2.3e-09 29.0 4.0 3 3 6e-07 4.3e-05 15.0 0.1 10 55 320 365 312 369 0.90 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 RNA_helicase PF00910.17 107 5.4e-08 25.5 0.6 1 2 0.00014 0.01 8.5 0.0 2 33 24 52 23 78 0.77 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 RNA_helicase PF00910.17 107 5.4e-08 25.5 0.6 2 2 3.3e-06 0.00024 13.7 0.0 3 62 337 412 335 441 0.71 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 4_4 - 373 TrkA_N PF02254.13 116 1.6e-06 20.6 0.1 1 1 2.9e-07 7e-06 18.5 0.0 1 32 6 37 6 71 0.81 # 2661 # 3779 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.355 1_17 - 555 TrkA_N PF02254.13 116 0.00011 14.6 0.1 1 2 0.0017 0.041 6.4 0.0 1 52 4 56 4 65 0.72 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 555 TrkA_N PF02254.13 116 0.00011 14.6 0.1 2 2 0.0043 0.1 5.1 0.0 1 29 155 181 155 219 0.87 # 15224 # 16888 # -1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 4_7 - 334 TrkA_N PF02254.13 116 0.00043 12.8 0.2 1 1 5.3e-05 0.0013 11.2 0.2 1 39 27 66 27 124 0.84 # 4735 # 5736 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.341 3_3 - 67 S1 PF00575.18 74 4.3e-05 16.1 0.0 1 1 7e-07 5.1e-05 15.8 0.0 14 64 10 56 3 62 0.86 # 2102 # 2302 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 1_18 - 577 AAA_24 PF13479.1 213 8e-06 18.0 9.9 1 3 0.0015 0.11 4.5 0.0 9 70 26 78 20 105 0.73 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_24 PF13479.1 213 8e-06 18.0 9.9 2 3 0.0025 0.18 3.8 0.1 41 78 121 157 115 291 0.80 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_24 PF13479.1 213 8e-06 18.0 9.9 3 3 3e-05 0.0022 10.0 4.7 9 98 338 473 331 507 0.72 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 NACHT PF05729.7 166 1.6e-05 17.0 5.7 1 2 6.3e-05 0.0045 9.1 0.0 2 28 22 48 21 80 0.87 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 NACHT PF05729.7 166 1.6e-05 17.0 5.7 2 2 0.00033 0.024 6.7 2.6 2 27 334 359 333 506 0.88 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_25 PF13481.1 194 3.3e-14 45.1 0.0 1 2 1.4e-06 0.0001 14.2 0.0 36 65 23 53 7 89 0.81 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_25 PF13481.1 194 3.3e-14 45.1 0.0 2 2 1.2e-10 8.7e-09 27.5 0.0 38 153 337 454 324 479 0.76 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_28 PF13521.1 163 0.0024 10.3 3.5 1 2 0.0059 0.43 3.0 0.0 4 23 25 48 23 73 0.75 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_28 PF13521.1 163 0.0024 10.3 3.5 2 2 0.0014 0.1 5.0 1.8 9 34 342 374 337 486 0.68 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_5 PF07728.9 139 1.7e-06 20.3 1.7 1 3 0.00037 0.027 6.7 0.0 2 54 23 77 22 97 0.76 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_5 PF07728.9 139 1.7e-06 20.3 1.7 2 3 0.075 5.4 -0.8 0.0 81 115 293 332 288 341 0.69 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 AAA_5 PF07728.9 139 1.7e-06 20.3 1.7 3 3 1.7e-05 0.0013 11.0 0.2 5 35 338 369 334 403 0.72 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 APS_kinase PF01583.15 157 2.9e-08 25.9 0.4 1 2 3.3e-06 0.00024 13.2 0.0 5 39 23 57 20 73 0.90 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 577 APS_kinase PF01583.15 157 2.9e-08 25.9 0.4 2 2 2.6e-05 0.0019 10.3 0.1 5 36 335 366 331 395 0.84 # 16885 # 18615 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/92905482-c45c-4609-9bfd-a527b6747549 # Target file: checkm_output/bins/pGCA_000010125.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000010125.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/92905482-c45c-4609-9bfd-a527b6747549 checkm_output/bins/pGCA_000010125.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:38:41 2020 # [ok]