#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
2_4                  -            133 Seryl_tRNA_N         PF02403.17   108   8.4e-05   12.8   4.5   1   2     0.006     0.084    3.1   0.0    86   107    33    54     3    55 0.83 # 2672 # 3070 # -1 # ID=2_4;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.361
2_4                  -            133 Seryl_tRNA_N         PF02403.17   108   8.4e-05   12.8   4.5   2   2     5e-05   0.00069    9.8   2.3    34    89    69   130    56   132 0.68 # 2672 # 3070 # -1 # ID=2_4;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.361
1_1                  -            225 AAA_17               PF13207.1    121   1.3e-06   19.4   1.3   1   1   1.4e-07   1.9e-06   18.9   1.3    23   113    24   122    20   206 0.85 # 57 # 731 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345
3_2                  -            289 AsnA                 PF03590.10   244   1.5e-05   14.6   0.7   1   1   2.3e-06   3.2e-05   13.5   0.7    80   141   189   250   101   262 0.76 # 1965 # 2831 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.258
3_1                  -            335 Ribosomal_L11        PF00298.14    69   0.00012   12.4   2.0   1   1   2.1e-05   0.00029   11.2   0.1    16    43    23    51    16    62 0.91 # 756 # 1760 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/722d5f38-a137-41f1-aa67-000f02c436e3
# Target file:     checkm_output/bins/pGCA_000009585.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000009585.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/722d5f38-a137-41f1-aa67-000f02c436e3 checkm_output/bins/pGCA_000009585.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:38:34 2020
# [ok]