# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 102 Mg_chelatase PF01078.16 207 2.4e-05 17.6 0.0 1 1 2.4e-07 2.6e-05 17.5 0.0 2 51 16 71 15 89 0.73 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_81 - 227 Mg_chelatase PF01078.16 207 0.0014 11.8 0.2 1 1 5e-05 0.0054 9.9 0.0 15 60 24 69 20 85 0.77 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_4 - 102 Torsin PF06309.6 127 0.0012 12.7 0.0 1 1 8.3e-06 0.0018 12.2 0.0 25 75 17 61 2 71 0.79 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_89 - 80 Ribosomal_S17 PF00366.15 69 0.00055 14.0 0.1 1 1 3.2e-06 0.0007 13.7 0.1 4 25 30 51 28 66 0.90 # 82574 # 82813 # -1 # ID=2_89;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 1_4 - 102 Rad17 PF03215.10 519 1.4e-05 17.9 0.0 1 1 6.3e-08 1.4e-05 17.9 0.0 10 68 8 62 2 82 0.80 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_4 - 102 IstB_IS21 PF01695.12 178 0.0022 11.4 0.0 1 1 1.2e-05 0.0026 11.2 0.0 32 68 26 60 10 64 0.78 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_19 - 223 MipZ PF09140.6 261 1.7e-10 34.4 0.0 1 1 1.5e-12 3.2e-10 33.5 0.0 4 125 51 184 48 190 0.65 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 1_58 - 470 3HCDH_N PF02737.13 180 7.6e-09 29.4 0.0 1 1 7.4e-11 1.6e-08 28.4 0.0 1 42 5 46 5 74 0.88 # 55228 # 56637 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 1_34 - 410 GIDA PF01134.17 392 0.00043 13.2 0.4 1 2 1.7e-05 0.0037 10.1 0.0 1 29 6 42 6 64 0.81 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_34 - 410 GIDA PF01134.17 392 0.00043 13.2 0.4 2 2 0.013 2.8 0.6 0.0 100 142 109 152 96 176 0.73 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 2_43 - 447 Pyr_redox_2 PF07992.9 201 5.4e-06 20.4 0.0 1 1 1.7e-07 1.8e-05 18.7 0.0 2 128 5 189 4 380 0.80 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 1_34 - 410 Pyr_redox_2 PF07992.9 201 0.0003 14.7 0.1 1 1 6.9e-06 0.00075 13.4 0.1 1 90 6 137 6 179 0.59 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_51 - 686 DUF87 PF01935.12 229 3e-09 31.0 0.5 1 1 1.1e-10 1.2e-08 29.1 0.4 25 82 309 367 303 618 0.92 # 46704 # 48761 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 1_19 - 389 DUF87 PF01935.12 229 3.3e-06 21.0 0.9 1 1 8.2e-08 8.8e-06 19.6 0.1 23 49 144 170 137 181 0.88 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 2_81 - 227 NB-ARC PF00931.17 287 0.0016 11.3 0.1 1 1 1.2e-05 0.0026 10.6 0.1 20 39 32 51 21 67 0.84 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_19 - 389 AAA_22 PF13401.1 131 1.1e-06 22.8 0.0 1 1 3.8e-08 2e-06 22.0 0.0 5 112 145 273 140 293 0.75 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_6 - 152 AAA_22 PF13401.1 131 8.9e-06 19.9 0.3 1 2 2.7e-06 0.00014 16.0 0.0 77 124 5 55 2 62 0.82 # 5755 # 6210 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.346 1_6 - 152 AAA_22 PF13401.1 131 8.9e-06 19.9 0.3 2 2 0.03 1.6 2.9 0.2 76 113 80 122 47 139 0.65 # 5755 # 6210 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.346 2_81 - 227 AAA_22 PF13401.1 131 7e-05 17.0 0.3 1 1 8.1e-06 0.00044 14.4 0.3 3 23 30 50 28 206 0.77 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_4 - 102 AAA_22 PF13401.1 131 0.00064 13.9 0.0 1 1 1.3e-05 0.00071 13.7 0.0 5 24 40 59 26 92 0.88 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_81 - 174 tRNA_anti-like PF12869.2 144 0.0013 12.2 0.4 1 1 1.6e-05 0.0035 10.8 0.4 2 66 2 118 1 124 0.64 # 87526 # 88047 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.262 1_34 - 410 Trp_halogenase PF04820.9 454 5.6e-09 29.0 0.2 1 3 0.00038 0.041 6.4 0.0 1 77 6 78 6 84 0.76 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_34 - 410 Trp_halogenase PF04820.9 454 5.6e-09 29.0 0.2 2 3 0.00034 0.037 6.6 0.2 149 213 99 168 93 178 0.81 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_34 - 410 Trp_halogenase PF04820.9 454 5.6e-09 29.0 0.2 3 3 5.8e-06 0.00062 12.4 0.0 314 373 287 346 259 378 0.84 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 2_43 - 447 Trp_halogenase PF04820.9 454 2.8e-07 23.4 0.1 1 3 0.077 8.3 -1.2 0.0 3 32 6 32 4 35 0.82 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 Trp_halogenase PF04820.9 454 2.8e-07 23.4 0.1 2 3 4.4e-05 0.0048 9.5 0.0 160 213 125 179 112 188 0.77 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 Trp_halogenase PF04820.9 454 2.8e-07 23.4 0.1 3 3 2.1e-05 0.0022 10.6 0.0 316 370 307 362 296 373 0.80 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_19 - 223 SRP54 PF00448.17 196 5.4e-06 20.0 0.1 1 2 7.7e-07 0.00017 15.1 0.0 10 39 57 86 49 104 0.91 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 2_19 - 223 SRP54 PF00448.17 196 5.4e-06 20.0 0.1 2 2 0.0059 1.3 2.4 0.0 76 92 149 165 128 208 0.78 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 1_6 - 152 DNA_pol3_delta2 PF13177.1 162 5e-29 95.0 0.1 1 1 7.6e-31 8.2e-29 94.3 0.1 85 161 2 78 1 79 0.97 # 5755 # 6210 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.346 1_4 - 102 DNA_pol3_delta2 PF13177.1 162 1.4e-12 41.6 0.0 1 1 1.5e-14 1.6e-12 41.4 0.0 1 68 21 90 21 95 0.94 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_4 - 102 AAA_17 PF13207.1 121 3.3e-05 18.7 0.3 1 1 4.3e-07 4.7e-05 18.2 0.0 3 22 43 62 42 94 0.85 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_81 - 227 AAA_17 PF13207.1 121 0.00031 15.6 0.2 1 1 5.3e-06 0.00057 14.7 0.3 2 19 34 51 33 124 0.88 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_81 - 227 AAA_21 PF13304.1 303 3.3e-13 44.2 0.0 1 1 7.7e-12 1.7e-09 32.0 0.0 3 299 35 201 33 205 0.62 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_81 - 227 MobB PF03205.9 140 0.0014 12.3 0.1 1 1 2.3e-05 0.005 10.5 0.0 3 19 34 50 32 54 0.89 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_19 - 223 ArsA_ATPase PF02374.10 305 2.6e-06 20.6 0.0 1 2 9.8e-06 0.0021 11.1 0.0 10 38 57 85 48 99 0.90 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 2_19 - 223 ArsA_ATPase PF02374.10 305 2.6e-06 20.6 0.0 2 2 0.00016 0.034 7.1 0.0 115 136 143 166 128 169 0.80 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 1_4 - 102 T2SE PF00437.15 272 3.5e-05 16.8 0.0 1 1 4e-07 4.3e-05 16.5 0.0 103 149 15 60 4 67 0.86 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_19 - 389 T2SE PF00437.15 272 0.00058 12.8 0.0 1 1 1.1e-05 0.0012 11.7 0.0 129 153 145 169 93 178 0.85 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 2_19 - 223 AAA_26 PF13500.1 199 1.9e-06 21.6 0.2 1 2 0.00032 0.07 6.7 0.0 1 34 48 81 48 94 0.93 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 2_19 - 223 AAA_26 PF13500.1 199 1.9e-06 21.6 0.2 2 2 3.6e-06 0.00079 13.0 0.1 131 170 182 221 165 222 0.89 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 1_19 - 389 Zeta_toxin PF06414.7 201 0.0012 11.9 0.0 1 1 9.3e-06 0.002 11.2 0.0 19 94 147 223 140 241 0.74 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_34 - 410 NAD_binding_8 PF13450.1 68 4.8e-05 17.4 0.0 1 1 6.6e-07 0.00014 15.9 0.0 2 29 10 37 9 51 0.92 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 2_43 - 447 GMC_oxred_N PF00732.14 296 9.2e-06 18.9 0.2 1 2 0.053 11 -1.1 0.0 3 41 5 43 4 60 0.66 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 GMC_oxred_N PF00732.14 296 9.2e-06 18.9 0.2 2 2 1.6e-07 3.5e-05 17.0 0.1 205 255 125 174 108 201 0.81 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 1_58 - 470 F420_oxidored PF03807.12 96 1.3e-05 19.5 0.1 1 1 1.8e-07 3.8e-05 18.1 0.1 1 92 5 99 5 103 0.80 # 55228 # 56637 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 1_34 - 410 FAD_binding_3 PF01494.14 356 8.8e-21 68.3 0.0 1 1 4.4e-22 4.8e-20 65.8 0.0 2 258 5 249 4 343 0.68 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 2_43 - 447 FAD_binding_3 PF01494.14 356 4.9e-08 26.3 0.0 1 2 4.5e-05 0.0048 9.9 0.0 5 39 6 40 3 50 0.86 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 FAD_binding_3 PF01494.14 356 4.9e-08 26.3 0.0 2 2 2.3e-06 0.00024 14.2 0.0 116 325 117 341 105 346 0.58 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_81 - 227 SMC_N PF02463.14 220 1.3e-08 28.3 0.5 1 2 1.9e-05 0.004 10.4 0.4 25 44 32 51 25 59 0.88 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_81 - 227 SMC_N PF02463.14 220 1.3e-08 28.3 0.5 2 2 2.6e-07 5.6e-05 16.4 0.0 134 205 139 207 56 219 0.74 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_19 - 223 Fer4_NifH PF00142.13 273 3.1e-05 17.2 0.1 1 1 3.9e-07 8.4e-05 15.8 0.1 9 58 57 106 51 167 0.82 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 1_19 - 389 Arch_ATPase PF01637.13 234 2.1e-07 24.8 0.2 1 1 1.6e-09 3.5e-07 24.1 0.2 20 131 144 260 137 273 0.76 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_19 - 389 AAA_16 PF13191.1 185 7e-05 16.8 0.0 1 1 1.8e-06 0.00013 16.0 0.0 20 48 140 168 125 194 0.83 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 2_81 - 227 AAA_16 PF13191.1 185 0.00016 15.7 0.2 1 1 2.7e-06 0.00019 15.4 0.2 21 42 28 49 20 167 0.91 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_4 - 102 AAA_16 PF13191.1 185 0.00019 15.5 0.0 1 1 2.6e-06 0.00019 15.5 0.0 24 42 39 57 18 85 0.77 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_19 - 389 AAA_23 PF13476.1 202 0.0013 13.1 0.4 1 1 3.6e-05 0.0026 12.1 0.4 15 39 140 164 131 375 0.82 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 2_81 - 227 AAA_23 PF13476.1 202 0.0024 12.2 0.5 1 1 6e-05 0.0043 11.3 0.5 23 39 35 51 21 54 0.86 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_4 - 102 AAA_23 PF13476.1 202 0.0086 10.4 3.5 1 2 0.036 2.6 2.3 0.3 32 41 26 35 26 35 0.93 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_4 - 102 AAA_23 PF13476.1 202 0.0086 10.4 3.5 2 2 0.00028 0.02 9.2 0.2 23 39 43 59 40 72 0.91 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_4 - 102 AAA_18 PF13238.1 129 0.00023 15.5 0.0 1 1 4.3e-06 0.00031 15.1 0.0 2 21 43 62 43 91 0.73 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_81 - 227 AAA_18 PF13238.1 129 0.00033 15.0 0.0 1 2 4.4e-05 0.0031 11.8 0.0 1 18 34 51 34 124 0.81 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_81 - 227 AAA_18 PF13238.1 129 0.00033 15.0 0.0 2 2 0.071 5.1 1.4 0.0 48 97 169 212 125 222 0.77 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_8 - 911 AAA_18 PF13238.1 129 0.017 9.4 6.1 1 1 0.00012 0.0085 10.4 1.1 30 92 148 208 123 231 0.87 # 7107 # 9839 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.311 1_47 - 199 AAA_13 PF13166.1 712 0.00038 13.0 5.0 1 1 1.9e-06 0.00041 12.8 5.0 87 192 22 125 15 170 0.65 # 41996 # 42592 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.327 2_19 - 223 CbiA PF01656.18 195 7.6e-21 68.4 0.3 1 1 5.8e-23 1.3e-20 67.6 0.3 2 159 51 220 50 222 0.76 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 1_4 - 102 AAA_14 PF13173.1 128 0.00022 15.1 0.0 1 1 1.8e-06 0.00038 14.4 0.0 4 26 41 63 39 96 0.69 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_43 - 447 SE PF08491.5 276 4.1e-05 16.5 0.0 1 2 0.069 15 -1.8 0.0 59 114 186 242 181 251 0.78 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 SE PF08491.5 276 4.1e-05 16.5 0.0 2 2 6.3e-07 0.00014 14.8 0.0 76 176 253 353 244 365 0.81 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 HI0933_like PF03486.9 409 0.00087 11.8 0.8 1 3 5.4e-05 0.012 8.0 0.0 2 38 4 40 3 43 0.90 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 HI0933_like PF03486.9 409 0.00087 11.8 0.8 2 3 0.0068 1.5 1.1 0.4 108 163 110 174 106 195 0.63 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 HI0933_like PF03486.9 409 0.00087 11.8 0.8 3 3 0.078 17 -2.3 0.0 82 98 179 195 176 210 0.72 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 1_4 - 102 AAA_6 PF12774.2 231 0.0018 11.8 0.1 1 1 9.8e-06 0.0021 11.6 0.1 37 77 44 84 18 88 0.83 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_81 - 227 AAA_29 PF13555.1 62 4e-06 20.3 0.1 1 1 9.9e-08 7.1e-06 19.5 0.1 19 40 28 48 20 59 0.81 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_19 - 389 AAA_29 PF13555.1 62 9.2e-05 16.0 0.0 1 1 2.6e-06 0.00019 15.0 0.0 19 40 140 161 132 171 0.84 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_4 - 102 AAA_29 PF13555.1 62 0.00059 13.4 0.1 1 1 2.2e-05 0.0016 12.0 0.1 21 39 37 55 26 57 0.81 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_43 - 447 FAD_binding_2 PF00890.19 417 2.6e-08 27.0 0.0 1 2 0.00018 0.019 7.7 0.0 2 34 5 37 4 45 0.90 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 FAD_binding_2 PF00890.19 417 2.6e-08 27.0 0.0 2 2 2.4e-07 2.6e-05 17.2 0.0 143 210 113 186 64 195 0.79 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 1_34 - 410 FAD_binding_2 PF00890.19 417 1.7e-05 17.8 0.0 1 2 0.0001 0.011 8.5 0.0 1 32 6 37 6 49 0.93 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_34 - 410 FAD_binding_2 PF00890.19 417 1.7e-05 17.8 0.0 2 2 0.00027 0.03 7.1 0.1 145 200 108 163 102 184 0.83 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_6 - 152 AAA PF00004.24 132 1e-07 26.2 0.0 1 1 1.6e-09 1.7e-07 25.5 0.0 44 127 5 73 1 77 0.83 # 5755 # 6210 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.346 1_4 - 102 AAA PF00004.24 132 3e-06 21.5 0.0 1 1 3.9e-08 4.2e-06 21.0 0.0 2 22 43 63 42 89 0.82 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_34 - 410 Thi4 PF01946.12 230 6.1e-05 16.2 0.0 1 2 3.3e-06 0.00071 12.7 0.0 18 48 5 35 2 45 0.93 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_34 - 410 Thi4 PF01946.12 230 6.1e-05 16.2 0.0 2 2 0.015 3.2 0.7 0.0 107 133 116 141 94 144 0.81 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 2_8 - 99 PAPS_reduct PF01507.14 174 0.0013 12.6 0.9 1 1 7e-06 0.0015 12.3 0.9 34 99 20 86 11 92 0.79 # 6512 # 6808 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.323 1_4 - 102 Sigma54_activat PF00158.21 168 7.5e-05 16.2 0.0 1 1 3.9e-07 8.5e-05 16.1 0.0 6 44 23 61 19 89 0.73 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_81 - 227 MMR_HSR1 PF01926.18 116 0.0014 12.6 0.4 1 1 9.5e-06 0.0021 12.1 0.4 2 19 34 51 33 213 0.90 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_58 - 470 NAD_binding_11 PF14833.1 122 0.00019 15.5 0.0 1 1 4.8e-06 0.001 13.1 0.0 1 41 176 217 176 234 0.87 # 55228 # 56637 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 1_80 - 179 Prenylcys_lyase PF07156.9 368 0.00087 12.2 0.4 1 1 4.8e-06 0.001 11.9 0.4 160 242 48 128 31 148 0.72 # 86702 # 87238 # -1 # ID=1_80;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.304 2_81 - 227 DUF258 PF03193.11 161 3.6e-05 17.0 0.0 1 1 3.1e-07 6.6e-05 16.1 0.0 35 55 30 51 17 66 0.85 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_8 - 99 FTHFS PF01268.14 557 0.00076 11.5 0.1 1 1 4.6e-06 0.00099 11.1 0.1 4 51 40 88 37 96 0.82 # 6512 # 6808 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.323 1_67 - 1025 TraG-D_C PF12696.2 128 3.3e-13 43.6 0.0 1 1 6.1e-15 1.3e-12 41.7 0.0 5 123 608 728 606 732 0.81 # 66120 # 69194 # -1 # ID=1_67;partial=00;start_type=TTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.353 1_58 - 470 NAD_binding_2 PF03446.10 163 6.6e-52 169.6 0.1 1 1 4.4e-54 9.6e-52 169.1 0.1 3 162 5 173 3 174 0.96 # 55228 # 56637 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 2_19 - 223 AAA_31 PF13614.1 157 3.3e-30 99.1 0.1 1 1 1.9e-32 4.2e-30 98.7 0.1 2 155 49 194 48 196 0.94 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 2_81 - 227 AAA_33 PF13671.1 143 0.00033 14.5 0.5 1 1 8e-06 0.0017 12.2 0.5 2 19 34 51 33 220 0.53 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_58 - 470 NAD_Gly3P_dh_N PF01210.18 157 3e-06 21.0 0.0 1 1 5.6e-08 1.2e-05 19.1 0.0 1 50 5 53 5 119 0.85 # 55228 # 56637 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 1_58 - 470 2-Hacid_dh_C PF02826.14 178 6.5e-05 16.1 0.1 1 1 6.6e-07 0.00014 15.0 0.1 36 77 3 46 1 128 0.76 # 55228 # 56637 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 2_81 - 227 AAA_30 PF13604.1 196 0.00013 15.6 0.3 1 2 8.3e-05 0.006 10.1 0.0 14 38 27 51 23 61 0.85 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_81 - 227 AAA_30 PF13604.1 196 0.00013 15.6 0.3 2 2 0.0084 0.6 3.6 0.1 71 128 133 198 113 207 0.70 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_6 - 152 AAA_30 PF13604.1 196 0.00026 14.6 0.0 1 1 7e-06 0.0005 13.7 0.0 91 127 17 53 2 61 0.83 # 5755 # 6210 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.346 1_4 - 102 AAA_30 PF13604.1 196 0.0028 11.2 0.4 1 1 6.4e-05 0.0046 10.5 0.3 20 39 41 60 30 65 0.82 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_58 - 470 ApbA PF02558.11 151 0.00044 13.7 0.0 1 1 4.6e-06 0.00099 12.6 0.0 1 94 6 94 6 105 0.73 # 55228 # 56637 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 1_6 - 152 DNA_pol3_delta PF06144.8 172 6.7e-06 19.7 0.1 1 1 3.6e-08 7.8e-06 19.5 0.1 56 168 18 122 2 126 0.84 # 5755 # 6210 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.346 1_19 - 389 FtsK_SpoIIIE PF01580.13 205 1e-26 87.7 0.1 1 1 1.4e-28 1.5e-26 87.1 0.1 17 204 121 291 116 292 0.90 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_51 - 686 FtsK_SpoIIIE PF01580.13 205 0.00012 15.6 0.2 1 1 5.5e-06 0.0006 13.3 0.1 31 92 299 357 289 366 0.81 # 46704 # 48761 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 2_81 - 227 ABC_tran PF00005.22 137 7.8e-34 110.9 0.0 1 1 9.8e-36 1.1e-33 110.5 0.0 1 136 21 169 21 170 0.91 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_19 - 389 ABC_tran PF00005.22 137 0.00064 14.0 0.0 1 1 1.2e-05 0.0013 13.1 0.0 13 45 146 180 142 296 0.70 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_58 - 470 UDPG_MGDP_dh_N PF03721.9 185 4.8e-06 20.0 0.1 1 1 5.5e-08 1.2e-05 18.8 0.1 2 41 5 44 4 71 0.87 # 55228 # 56637 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 1_4 - 102 RuvB_N PF05496.7 234 7.5e-10 32.2 0.0 1 1 3.7e-12 8.1e-10 32.1 0.0 16 83 9 72 2 88 0.78 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_4 - 102 AAA_19 PF13245.1 76 1.3e-05 18.9 0.1 1 1 2.6e-07 1.8e-05 18.4 0.1 11 33 40 61 26 76 0.82 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 2_19 - 223 AAA_19 PF13245.1 76 0.00054 13.7 0.0 1 1 1.3e-05 0.00092 13.0 0.0 18 54 56 89 42 113 0.75 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 1_51 - 686 AAA_19 PF13245.1 76 0.0016 12.2 1.0 1 1 4.7e-05 0.0034 11.2 1.0 13 53 310 346 295 349 0.82 # 46704 # 48761 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 2_25 - 236 Ribosomal_S6 PF01250.12 92 0.00068 13.5 0.7 1 2 2.9e-05 0.0062 10.4 0.1 1 47 101 147 101 159 0.90 # 21470 # 22177 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 2_25 - 236 Ribosomal_S6 PF01250.12 92 0.00068 13.5 0.7 2 2 0.076 16 -0.5 0.0 35 54 191 210 181 214 0.71 # 21470 # 22177 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_51 - 686 AAA_10 PF12846.2 304 3.1e-45 148.8 0.2 1 1 9.6e-47 5.2e-45 148.1 0.2 3 303 309 606 307 607 0.91 # 46704 # 48761 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 1_19 - 389 AAA_10 PF12846.2 304 4.1e-08 26.9 0.1 1 2 3.9e-05 0.0021 11.5 0.0 1 25 144 168 144 193 0.87 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_19 - 389 AAA_10 PF12846.2 304 4.1e-08 26.9 0.1 2 2 8.5e-06 0.00046 13.6 0.0 204 289 215 313 194 321 0.75 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 2_81 - 227 AAA_10 PF12846.2 304 2.8e-05 17.6 0.1 1 1 2.8e-06 0.00015 15.2 0.0 6 22 36 52 33 73 0.83 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_67 - 1025 AAA_10 PF12846.2 304 3.7e-05 17.2 0.0 1 1 3.8e-06 0.00021 14.8 0.0 3 294 286 675 284 685 0.63 # 66120 # 69194 # -1 # ID=1_67;partial=00;start_type=TTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.353 2_81 - 227 SbcCD_C PF13558.1 90 0.00054 13.9 0.1 1 1 4.4e-05 0.0047 10.9 0.1 61 89 157 185 118 186 0.79 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_51 - 686 SbcCD_C PF13558.1 90 0.0015 12.5 0.0 1 1 4.7e-05 0.0051 10.8 0.0 41 76 503 539 500 552 0.83 # 46704 # 48761 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 2_43 - 447 FAD_oxidored PF12831.2 428 4.5e-08 26.5 0.0 1 1 6.1e-10 6.6e-08 25.9 0.0 3 149 6 176 5 178 0.82 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 1_34 - 410 FAD_oxidored PF12831.2 428 1e-05 18.7 0.5 1 1 5.3e-07 5.8e-05 16.3 0.5 1 146 6 162 6 170 0.72 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_34 - 410 DAO PF01266.19 358 2.8e-09 30.3 0.0 1 2 7.2e-07 7.8e-05 15.6 0.0 1 34 6 39 6 52 0.93 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_34 - 410 DAO PF01266.19 358 2.8e-09 30.3 0.0 2 2 5.7e-06 0.00061 12.7 0.0 153 216 110 178 93 260 0.79 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 2_43 - 447 DAO PF01266.19 358 0.00029 13.8 0.0 1 2 0.0057 0.62 2.8 0.0 2 39 5 43 4 84 0.78 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 DAO PF01266.19 358 0.00029 13.8 0.0 2 2 8.8e-05 0.0095 8.8 0.0 161 207 127 181 112 235 0.79 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 1_80 - 179 Methyltransf_31 PF13847.1 152 0.0003 14.4 0.1 1 1 1.8e-06 0.00039 14.0 0.1 53 97 43 86 36 129 0.87 # 86702 # 87238 # -1 # ID=1_80;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.304 1_19 - 389 Viral_helicase1 PF01443.13 234 0.001 12.6 0.1 1 1 1.3e-05 0.0028 11.2 0.0 2 66 148 211 147 212 0.88 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_4 - 102 TIP49 PF06068.8 398 3.1e-06 20.1 0.0 1 1 3e-08 3.3e-06 20.0 0.0 25 81 18 70 9 90 0.83 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_6 - 152 TIP49 PF06068.8 398 7e-06 18.9 0.5 1 1 3.6e-07 3.8e-05 16.5 0.5 281 389 22 118 16 127 0.68 # 5755 # 6210 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.346 2_81 - 227 DEAD PF00270.24 169 0.00027 14.4 0.0 1 1 2.2e-06 0.00048 13.6 0.0 9 150 25 190 18 203 0.71 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_4 - 102 DUF815 PF05673.8 250 2.7e-05 17.2 0.0 1 1 2.9e-07 3.1e-05 17.0 0.0 22 74 11 60 2 67 0.82 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_19 - 389 DUF815 PF05673.8 250 0.00014 14.8 0.5 1 1 2.4e-06 0.00026 13.9 0.0 52 79 143 170 134 208 0.77 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_34 - 410 Pyr_redox PF00070.22 80 0.00022 15.6 0.2 1 3 0.00023 0.049 8.1 0.0 2 55 7 61 6 77 0.77 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_34 - 410 Pyr_redox PF00070.22 80 0.00022 15.6 0.2 2 3 0.028 6 1.4 0.0 45 73 109 138 103 146 0.77 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_34 - 410 Pyr_redox PF00070.22 80 0.00022 15.6 0.2 3 3 0.019 4.2 1.9 0.0 40 67 334 362 326 375 0.82 # 28781 # 30010 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.401 1_67 - 1025 TrwB_AAD_bind PF10412.4 386 4e-08 26.2 0.0 1 2 0.003 0.22 4.0 0.0 13 32 282 301 273 314 0.86 # 66120 # 69194 # -1 # ID=1_67;partial=00;start_type=TTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.353 1_67 - 1025 TrwB_AAD_bind PF10412.4 386 4e-08 26.2 0.0 2 2 5.9e-08 4.3e-06 19.5 0.0 259 337 618 696 556 745 0.76 # 66120 # 69194 # -1 # ID=1_67;partial=00;start_type=TTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.353 1_19 - 389 TrwB_AAD_bind PF10412.4 386 0.00026 13.7 0.0 1 2 8e-05 0.0057 9.2 0.0 13 39 142 168 135 173 0.86 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_19 - 389 TrwB_AAD_bind PF10412.4 386 0.00026 13.7 0.0 2 2 0.013 0.92 2.0 0.0 238 281 241 289 232 292 0.78 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_51 - 686 TrwB_AAD_bind PF10412.4 386 0.00094 11.8 0.3 1 1 2.7e-05 0.0019 10.8 0.1 12 54 304 346 296 349 0.90 # 46704 # 48761 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364 2_19 - 223 ParA PF10609.4 81 3.6e-05 17.6 1.3 1 1 3.7e-07 8.1e-05 16.5 0.5 2 62 158 217 157 221 0.87 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 1_67 - 1025 T4SS-DNA_transf PF02534.9 469 4.1e-11 36.0 0.1 1 1 4.8e-13 1e-10 34.7 0.0 240 407 541 710 339 730 0.67 # 66120 # 69194 # -1 # ID=1_67;partial=00;start_type=TTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.353 1_47 - 199 AAA_32 PF13654.1 509 2.4e-05 17.1 1.3 1 1 1.2e-07 2.7e-05 16.9 1.3 177 272 26 122 21 180 0.72 # 41996 # 42592 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.327 2_43 - 447 Amino_oxidase PF01593.19 450 0.002 11.1 0.1 1 2 0.0024 0.51 3.2 0.0 1 24 12 35 12 37 0.95 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 2_43 - 447 Amino_oxidase PF01593.19 450 0.002 11.1 0.1 2 2 0.00037 0.079 5.9 0.0 152 260 58 172 41 179 0.75 # 41227 # 42567 # 1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.328 1_19 - 389 Pox_A32 PF04665.7 241 0.00014 15.2 0.1 1 1 1.2e-06 0.00025 14.4 0.1 10 89 141 224 133 288 0.85 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_19 - 389 Gtr1_RagA PF04670.7 232 0.00064 12.9 0.1 1 1 6.6e-06 0.0014 11.7 0.1 2 24 147 169 146 212 0.76 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_19 - 389 RNA_helicase PF00910.17 107 0.001 13.3 0.0 1 1 2.3e-05 0.0025 12.0 0.0 2 56 148 204 147 220 0.74 # 19769 # 20935 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 2_77 - 238 RNA_helicase PF00910.17 107 0.0022 12.2 0.0 1 1 7.5e-05 0.0081 10.4 0.0 19 94 14 88 11 91 0.87 # 73651 # 74364 # -1 # ID=2_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.349 1_4 - 102 UPF0079 PF02367.12 123 0.00077 13.1 0.2 1 1 6.5e-06 0.0014 12.3 0.2 14 40 38 64 23 70 0.82 # 4067 # 4372 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_58 - 470 TrkA_N PF02254.13 116 0.00054 14.0 0.1 1 1 5.1e-06 0.0011 13.0 0.1 2 41 7 46 6 83 0.83 # 55228 # 56637 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 1_43 - 290 S1 PF00575.18 74 2.4e-09 31.2 5.7 1 2 3e-06 0.00065 13.8 0.0 20 73 138 192 119 193 0.80 # 37524 # 38393 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.362 1_43 - 290 S1 PF00575.18 74 2.4e-09 31.2 5.7 2 2 1.1e-07 2.3e-05 18.5 0.3 2 32 206 239 205 243 0.82 # 37524 # 38393 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.362 2_81 - 227 AAA_24 PF13479.1 213 0.00041 14.0 0.1 1 2 0.00048 0.1 6.1 0.0 7 20 35 48 33 57 0.87 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_81 - 227 AAA_24 PF13479.1 213 0.00041 14.0 0.1 2 2 0.00055 0.12 5.9 0.0 81 141 148 205 143 218 0.72 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 2_19 - 223 AAA_25 PF13481.1 194 8.6e-05 16.0 0.0 1 1 1.3e-06 0.00014 15.3 0.0 41 150 56 164 46 178 0.78 # 16264 # 16932 # 1 # ID=2_19;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.338 2_81 - 227 AAA_25 PF13481.1 194 0.00027 14.4 0.0 1 1 1e-05 0.0011 12.4 0.0 30 50 28 48 19 77 0.86 # 76349 # 77029 # -1 # ID=2_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.426 1_6 - 152 AAA_5 PF07728.9 139 0.00022 15.0 0.0 1 1 1.5e-06 0.00032 14.4 0.0 65 95 19 49 2 75 0.83 # 5755 # 6210 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.346 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/8b3b6725-a82e-475e-aa8a-e75a1e08bf3a # Target file: checkm_output/bins/pDQ889679.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pDQ889679.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8b3b6725-a82e-475e-aa8a-e75a1e08bf3a checkm_output/bins/pDQ889679.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:38:16 2020 # [ok]