#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_7                  -            152 AAA_22               PF13401.1    131   1.7e-07   21.0   0.3   1   1   2.9e-08   2.6e-07   20.4   0.3     3   113    35   143    31   150 0.74 # 3217 # 3672 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AAAAA;rbs_spacer=8bp;gc_cont=0.279
1_7                  -            152 AAA_18               PF13238.1    129   8.2e-06   15.7   0.7   1   1   1.5e-06   1.3e-05   15.0   0.7     1    83    39   129    39   141 0.71 # 3217 # 3672 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AAAAA;rbs_spacer=8bp;gc_cont=0.279
1_7                  -            152 AAA_14               PF13173.1    128   7.4e-06   15.4   0.6   1   1   1.8e-06   1.6e-05   14.4   0.6     3    75    37   132    35   148 0.63 # 3217 # 3672 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AAAAA;rbs_spacer=8bp;gc_cont=0.279
1_7                  -            152 AAA_29               PF13555.1     62     5e-05   12.4   0.0   1   1   1.2e-05    0.0001   11.4   0.0    12    37    25    50    23    62 0.90 # 3217 # 3672 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AAAAA;rbs_spacer=8bp;gc_cont=0.279
1_7                  -            152 Sigma54_activat      PF00158.21   168   2.5e-05   13.3   0.1   1   1   2.1e-05   0.00019   10.5   0.1    17   107    31   132    19   144 0.71 # 3217 # 3672 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AAAAA;rbs_spacer=8bp;gc_cont=0.279
1_7                  -            152 Sigma54_activ_2      PF14532.1    138   6.4e-05   12.6   0.0   1   1   1.3e-05   0.00011   11.8   0.0    36    93    76   142    30   149 0.82 # 3217 # 3672 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AAAAA;rbs_spacer=8bp;gc_cont=0.279
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/9bd3087f-a5b3-49c1-b704-1d9bc8e15dd7
# Target file:     checkm_output/bins/pCP018790.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pCP018790.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9bd3087f-a5b3-49c1-b704-1d9bc8e15dd7 checkm_output/bins/pCP018790.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:37:41 2020
# [ok]