# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_35 - 598 IstB_IS21 PF01695.12 178 2.4e-06 19.0 0.0 1 2 1.1e-06 5.4e-05 14.6 0.0 46 85 32 71 27 92 0.86 # 29073 # 30866 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_35 - 598 IstB_IS21 PF01695.12 178 2.4e-06 19.0 0.0 2 2 0.013 0.65 1.3 0.0 98 140 110 160 98 187 0.71 # 29073 # 30866 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_9 - 640 AIG1 PF04548.11 212 0.00013 13.0 0.0 1 1 6.6e-06 0.00033 11.7 0.0 32 62 51 81 43 108 0.84 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_27 - 142 SSB PF00436.20 104 2.7e-28 89.9 0.2 1 1 7.1e-30 3.5e-28 89.5 0.2 1 102 1 102 1 104 0.98 # 22709 # 23134 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.329 1_19 - 331 DUF87 PF01935.12 229 5.5e-05 15.0 0.1 1 1 4.5e-06 0.00011 14.0 0.1 28 48 165 185 157 193 0.84 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_30 - 923 DUF87 PF01935.12 229 6.6e-05 14.7 3.0 1 2 0.00015 0.0036 9.0 0.0 26 49 548 571 539 584 0.84 # 24397 # 27165 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.295 1_30 - 923 DUF87 PF01935.12 229 6.6e-05 14.7 3.0 2 2 0.011 0.29 2.8 0.2 101 165 639 700 631 732 0.75 # 24397 # 27165 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.295 1_19 - 331 Septin PF00735.13 281 3.7e-05 14.7 0.0 1 1 2.3e-06 5.9e-05 14.1 0.0 6 29 162 185 158 209 0.80 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_9 - 640 Septin PF00735.13 281 0.00014 12.9 0.1 1 1 9.7e-06 0.00024 12.0 0.1 7 77 6 82 3 91 0.68 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_19 - 331 AAA_22 PF13401.1 131 9.5e-06 17.7 0.0 1 1 3.9e-07 1.9e-05 16.7 0.0 4 41 160 208 156 256 0.70 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 ATP_bind_1 PF03029.12 238 0.00011 13.6 0.0 1 1 3.7e-06 0.00018 13.0 0.0 1 23 165 187 165 193 0.87 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 PRK PF00485.13 194 0.0003 12.3 0.0 1 1 1.2e-05 0.00058 11.4 0.0 2 24 163 185 162 221 0.83 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 AAA_17 PF13207.1 121 4.5e-06 19.5 0.1 1 1 2.2e-07 1.1e-05 18.2 0.1 2 49 163 207 162 303 0.82 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 2_3 - 94 AAA_21 PF13304.1 303 0.0024 9.7 10.7 1 1 5.6e-05 0.0028 9.5 10.7 80 162 6 88 2 92 0.93 # 1507 # 1788 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.202 1_9 - 640 Miro PF08477.8 119 8.7e-06 18.2 0.0 1 1 4.4e-07 2.2e-05 16.9 0.0 9 119 13 131 5 131 0.75 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_19 - 331 MobB PF03205.9 140 3e-05 15.7 0.6 1 2 2.2e-06 0.00011 13.8 0.0 3 27 163 187 161 199 0.81 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 MobB PF03205.9 140 3e-05 15.7 0.6 2 2 0.074 3.7 -0.8 0.1 20 44 296 320 294 321 0.80 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 2_7 - 1932 Helicase_C PF00271.26 78 1.2e-07 23.5 0.3 1 2 0.055 2.8 -0.1 0.0 14 40 1078 1104 1064 1106 0.84 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 2_7 - 1932 Helicase_C PF00271.26 78 1.2e-07 23.5 0.3 2 2 4.2e-08 2.1e-06 19.5 0.0 12 78 1515 1583 1508 1583 0.86 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_19 - 331 T2SE PF00437.15 272 1.6e-63 206.0 0.0 1 1 3.8e-65 1.9e-63 205.8 0.0 5 269 13 312 9 315 0.94 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 Zeta_toxin PF06414.7 201 6.2e-05 14.1 0.0 1 1 2e-06 0.0001 13.4 0.0 17 49 161 194 146 218 0.85 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 Arch_ATPase PF01637.13 234 0.00013 13.6 0.0 1 1 4.1e-06 0.00021 13.0 0.0 23 81 163 225 151 273 0.83 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 AAA_16 PF13191.1 185 2.4e-05 16.3 0.0 1 1 6.4e-07 3.2e-05 15.9 0.0 24 81 160 234 144 305 0.76 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 AAA_23 PF13476.1 202 0.0019 10.4 6.5 1 2 0.09 4.5 -0.6 0.3 106 106 110 110 7 158 0.50 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 AAA_23 PF13476.1 202 0.0019 10.4 6.5 2 2 8.7e-06 0.00044 12.5 1.5 22 37 163 178 160 184 0.89 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 AAA_18 PF13238.1 129 0.00015 14.1 1.3 1 1 4.9e-06 0.00025 13.3 0.0 1 18 163 180 163 227 0.76 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 2_9 - 187 CbiA PF01656.18 195 5.9e-08 24.2 0.1 1 2 1.4e-06 7.1e-05 14.2 0.0 1 24 3 26 3 30 0.92 # 11198 # 11758 # -1 # ID=2_9;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.241 2_9 - 187 CbiA PF01656.18 195 5.9e-08 24.2 0.1 2 2 8.1e-05 0.0041 8.4 0.0 95 181 54 134 29 151 0.69 # 11198 # 11758 # -1 # ID=2_9;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.241 1_35 - 598 KaiC PF06745.8 227 2e-05 15.7 0.0 1 2 1.9e-06 9.5e-05 13.5 0.0 16 71 30 84 23 214 0.85 # 29073 # 30866 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_35 - 598 KaiC PF06745.8 227 2e-05 15.7 0.0 2 2 0.086 4.3 -1.7 0.0 133 156 329 352 322 358 0.85 # 29073 # 30866 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_19 - 331 AAA_14 PF13173.1 128 2.4e-05 16.2 0.1 1 1 2.2e-06 0.00011 14.0 0.0 2 54 160 211 159 254 0.75 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 GvpD PF07088.6 484 0.00024 11.4 0.0 1 1 6.1e-06 0.00031 11.0 0.0 8 42 158 192 150 258 0.83 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_9 - 640 TIGR03594 TIGR03594 432 2.8e-08 24.7 0.3 1 3 0.044 2.2 -1.3 0.0 176 211 4 42 2 50 0.74 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_9 - 640 TIGR03594 TIGR03594 432 2.8e-08 24.7 0.3 2 3 2e-08 1e-06 19.6 0.1 31 123 51 135 47 154 0.87 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_9 - 640 TIGR03594 TIGR03594 432 2.8e-08 24.7 0.3 3 3 0.006 0.3 1.5 0.0 304 347 196 239 187 265 0.79 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_19 - 331 AAA_29 PF13555.1 62 2.3e-05 15.8 0.0 1 1 1.1e-06 5.5e-05 14.6 0.0 22 40 159 177 142 184 0.85 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_35 - 598 AAA PF00004.24 132 5.3e-05 15.4 0.2 1 2 2.5e-05 0.0013 10.9 0.0 2 105 37 166 36 177 0.66 # 29073 # 30866 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_35 - 598 AAA PF00004.24 132 5.3e-05 15.4 0.2 2 2 0.025 1.3 1.2 0.0 47 74 411 434 377 459 0.70 # 29073 # 30866 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_19 - 331 Sigma54_activat PF00158.21 168 5e-05 14.8 0.0 1 1 2.1e-06 0.00011 13.7 0.0 11 43 149 181 142 198 0.84 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_9 - 640 MMR_HSR1 PF01926.18 116 2.2e-08 26.1 0.1 1 1 8.6e-10 4.3e-08 25.1 0.1 4 116 8 129 5 129 0.68 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_18 - 604 TraG-D_C PF12696.2 128 1.5e-28 91.2 0.0 1 2 1.9e-29 9.3e-28 88.6 0.0 2 127 406 528 405 529 0.89 # 14771 # 16582 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_18 - 604 TraG-D_C PF12696.2 128 1.5e-28 91.2 0.0 2 2 0.069 3.4 -0.5 0.0 52 70 580 601 560 603 0.74 # 14771 # 16582 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_19 - 331 NTPase_1 PF03266.10 168 0.00035 12.2 0.1 1 1 1.3e-05 0.00066 11.3 0.1 1 23 162 184 162 192 0.88 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_35 - 598 DnaB_C PF03796.10 259 2.6e-06 18.4 0.0 1 2 2.1e-07 1.1e-05 16.3 0.0 13 117 27 136 23 156 0.79 # 29073 # 30866 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_35 - 598 DnaB_C PF03796.10 259 2.6e-06 18.4 0.0 2 2 0.011 0.56 0.9 0.0 129 185 119 177 101 179 0.77 # 29073 # 30866 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 2_7 - 1932 Methyltransf_26 PF13659.1 117 2.9e-13 41.9 0.0 1 1 1.8e-14 8.8e-13 40.3 0.0 3 116 311 421 309 422 0.84 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_19 - 331 FtsK_SpoIIIE PF01580.13 205 8e-08 23.9 0.0 1 1 5.4e-09 1.3e-07 23.1 0.0 39 59 157 181 132 187 0.81 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_30 - 923 FtsK_SpoIIIE PF01580.13 205 5.2e-05 14.7 0.0 1 1 4.3e-06 0.00011 13.7 0.0 39 63 539 570 514 576 0.74 # 24397 # 27165 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.295 2_7 - 1932 MTS PF05175.9 170 2.6e-05 15.5 0.0 1 1 1.5e-06 7.4e-05 14.1 0.0 31 142 308 422 301 442 0.75 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_19 - 331 ABC_tran PF00005.22 137 1.7e-07 23.6 0.0 1 1 6.9e-09 3.4e-07 22.6 0.0 4 50 153 200 151 226 0.84 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 2_7 - 1932 Eco57I PF07669.6 106 6.5e-08 24.9 0.3 1 1 1.3e-09 6.5e-08 24.9 0.3 3 104 371 472 369 474 0.83 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_30 - 923 AAA_10 PF12846.2 304 3e-39 127.1 1.2 1 1 5.8e-40 9.6e-39 125.4 0.3 2 297 546 839 545 845 0.83 # 24397 # 27165 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.295 1_19 - 331 AAA_10 PF12846.2 304 2.8e-06 18.8 0.0 1 1 2e-07 3.4e-06 18.6 0.0 2 37 161 196 160 323 0.79 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_18 - 604 AAA_10 PF12846.2 304 3.2e-05 15.3 0.0 1 1 3e-06 5e-05 14.7 0.0 25 302 147 490 126 491 0.70 # 14771 # 16582 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 2_7 - 1932 ResIII PF04851.10 184 2.5e-10 32.4 9.7 1 1 1e-11 2.5e-10 32.4 9.7 2 161 999 1195 998 1242 0.57 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_19 - 331 ResIII PF04851.10 184 3.7e-05 15.5 0.0 1 1 2.9e-06 7.3e-05 14.6 0.0 3 64 145 201 140 237 0.70 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_9 - 640 GTP_EFTU_D2 PF03144.20 74 1.7e-09 29.7 0.0 1 1 7e-11 3.5e-09 28.7 0.0 3 60 265 316 263 320 0.90 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 2_7 - 1932 DEAD PF00270.24 169 1e-08 26.8 0.6 1 2 6.2e-08 1.5e-06 19.7 0.1 2 107 1003 1109 1002 1244 0.78 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 2_7 - 1932 DEAD PF00270.24 169 1e-08 26.8 0.6 2 2 0.073 1.8 -0.1 0.0 120 150 1885 1917 1844 1924 0.73 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_19 - 331 DEAD PF00270.24 169 4.6e-06 18.1 0.0 1 1 3.4e-07 8.6e-06 17.2 0.0 3 69 149 212 147 243 0.69 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_18 - 604 TrwB_AAD_bind PF10412.4 386 8.6e-20 62.5 0.0 1 2 3.8e-05 0.00095 9.7 0.0 42 125 150 245 121 290 0.72 # 14771 # 16582 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_18 - 604 TrwB_AAD_bind PF10412.4 386 8.6e-20 62.5 0.0 2 2 1.2e-17 3e-16 50.8 0.0 185 380 345 542 307 544 0.84 # 14771 # 16582 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_19 - 331 TrwB_AAD_bind PF10412.4 386 0.0001 12.9 0.0 1 1 5.8e-06 0.00015 12.4 0.0 16 42 161 187 153 217 0.85 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_18 - 604 T4SS-DNA_transf PF02534.9 469 2.9e-107 351.0 0.1 1 1 8.5e-109 4.3e-107 350.4 0.1 2 461 93 565 82 571 0.84 # 14771 # 16582 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_9 - 640 GTP_EFTU PF00009.22 188 1.1e-59 193.0 0.4 1 1 3.2e-61 1.6e-59 192.4 0.4 2 185 2 237 1 240 0.92 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_19 - 331 RNA_helicase PF00910.17 107 0.0001 14.4 0.0 1 1 5.8e-06 0.00029 13.0 0.0 1 23 163 185 163 224 0.79 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 UPF0079 PF02367.12 123 1.4e-05 16.7 0.0 1 1 5.3e-07 2.6e-05 15.8 0.0 8 42 153 187 147 205 0.85 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_9 - 640 EFG_IV PF03764.13 120 6.4e-26 82.3 0.0 1 1 3.5e-27 1.7e-25 80.8 0.0 1 120 416 532 416 532 0.98 # 5629 # 7548 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.403 1_19 - 331 AAA_24 PF13479.1 213 0.00013 13.5 0.0 1 1 4.9e-06 0.00024 12.6 0.0 5 33 162 188 159 217 0.84 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_19 - 331 NACHT PF05729.7 166 1.7e-05 16.4 0.0 1 1 5.9e-07 3e-05 15.7 0.0 3 22 163 182 161 188 0.89 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_35 - 598 AAA_25 PF13481.1 194 6e-22 69.9 0.0 1 1 4.5e-23 1.1e-21 69.0 0.0 30 193 30 175 20 176 0.90 # 29073 # 30866 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_19 - 331 AAA_25 PF13481.1 194 0.00013 13.3 0.0 1 1 7.7e-06 0.00019 12.8 0.0 26 56 154 183 128 200 0.76 # 16583 # 17575 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 2_7 - 1932 SNF2_N PF00176.18 299 3.4e-21 67.1 4.2 1 3 1.7e-22 8.6e-21 65.8 0.4 24 204 1014 1274 954 1335 0.76 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 2_7 - 1932 SNF2_N PF00176.18 299 3.4e-21 67.1 4.2 2 3 0.0096 0.48 1.0 0.1 194 286 1461 1557 1444 1566 0.73 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 2_7 - 1932 SNF2_N PF00176.18 299 3.4e-21 67.1 4.2 3 3 0.084 4.2 -2.1 0.0 123 150 1872 1900 1837 1909 0.75 # 5087 # 10882 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/75a51d85-408a-4782-b698-08d96da90c5b # Target file: checkm_output/bins/pCP017418.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pCP017418.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/75a51d85-408a-4782-b698-08d96da90c5b checkm_output/bins/pCP017418.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:37:32 2020 # [ok]