# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_51 - 438 FeoB_N PF02421.13 156 0.00018 12.7 0.2 1 1 2.4e-05 0.0012 10.1 0.2 31 117 52 132 43 167 0.70 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_25 - 598 IstB_IS21 PF01695.12 178 2.4e-06 19.0 0.0 1 2 1.1e-06 5.5e-05 14.6 0.0 46 85 32 71 27 92 0.86 # 20287 # 22080 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_25 - 598 IstB_IS21 PF01695.12 178 2.4e-06 19.0 0.0 2 2 0.013 0.66 1.3 0.0 98 140 110 160 98 187 0.71 # 20287 # 22080 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_51 - 438 AIG1 PF04548.11 212 6.5e-05 14.0 0.2 1 1 4e-06 0.00021 12.4 0.0 32 62 51 81 43 109 0.84 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_33 - 141 SSB PF00436.20 104 2.2e-28 90.2 0.1 1 1 5.3e-30 2.7e-28 89.9 0.1 1 102 1 102 1 104 0.98 # 27912 # 28334 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.331 1_41 - 336 DUF87 PF01935.12 229 4.8e-05 15.2 0.0 1 1 1.7e-06 8.9e-05 14.3 0.0 27 48 164 185 142 193 0.84 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 Septin PF00735.13 281 3.8e-05 14.7 0.0 1 1 2.4e-06 6.1e-05 14.0 0.0 6 29 162 185 158 209 0.80 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_51 - 438 Septin PF00735.13 281 7.4e-05 13.8 0.1 1 1 5.6e-06 0.00014 12.8 0.1 7 77 6 82 3 91 0.68 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_41 - 336 AAA_22 PF13401.1 131 8.8e-06 17.9 0.0 1 1 3.9e-07 2e-05 16.7 0.0 4 41 160 208 156 259 0.71 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 ATP_bind_1 PF03029.12 238 0.00012 13.6 0.0 1 1 3.8e-06 0.00019 12.9 0.0 1 23 165 187 165 193 0.87 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 AAA_17 PF13207.1 121 4.5e-06 19.5 0.1 1 1 2.3e-07 1.2e-05 18.1 0.1 2 49 163 207 162 302 0.82 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_17 - 94 AAA_21 PF13304.1 303 0.0044 8.9 10.8 1 1 0.0001 0.0052 8.6 10.8 80 162 6 88 2 92 0.93 # 16454 # 16735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.202 1_51 - 438 Miro PF08477.8 119 3.5e-06 19.5 0.0 1 1 2.3e-07 1.1e-05 17.8 0.0 9 119 13 131 5 131 0.75 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_41 - 336 MobB PF03205.9 140 2.1e-05 16.2 0.4 1 2 2.3e-06 0.00012 13.8 0.0 3 27 163 187 161 199 0.81 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 MobB PF03205.9 140 2.1e-05 16.2 0.4 2 2 0.065 3.3 -0.6 0.1 20 44 296 320 293 322 0.81 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_12 - 1933 Helicase_C PF00271.26 78 1.3e-07 23.4 0.3 1 2 0.055 2.8 -0.1 0.0 14 40 1079 1105 1065 1107 0.84 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_12 - 1933 Helicase_C PF00271.26 78 1.3e-07 23.4 0.3 2 2 4.2e-08 2.1e-06 19.5 0.0 12 78 1516 1584 1509 1584 0.86 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_41 - 336 T2SE PF00437.15 272 7.1e-64 207.2 0.0 1 1 1.6e-65 8.2e-64 207.0 0.0 6 269 14 312 9 315 0.95 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 Zeta_toxin PF06414.7 201 6.6e-05 14.0 0.0 1 1 2.1e-06 0.00011 13.3 0.0 17 49 161 194 147 218 0.85 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 AAA_16 PF13191.1 185 2.6e-05 16.2 0.0 1 1 7.2e-07 3.7e-05 15.7 0.0 24 81 160 234 148 306 0.76 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 AAA_23 PF13476.1 202 0.00067 11.9 4.5 1 1 9.1e-06 0.00047 12.5 2.0 22 37 163 178 141 184 0.89 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 AAA_18 PF13238.1 129 8.3e-05 14.9 0.5 1 1 5e-06 0.00026 13.3 0.0 1 18 163 180 163 227 0.76 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_10 - 187 CbiA PF01656.18 195 1.8e-08 25.9 0.1 1 2 6.4e-07 3.3e-05 15.3 0.0 1 24 3 26 3 32 0.92 # 6045 # 6605 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_10 - 187 CbiA PF01656.18 195 1.8e-08 25.9 0.1 2 2 5.1e-05 0.0026 9.1 0.0 95 178 54 131 29 151 0.68 # 6045 # 6605 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_25 - 598 KaiC PF06745.8 227 2e-05 15.7 0.0 1 2 1.9e-06 9.7e-05 13.5 0.0 16 71 30 84 23 214 0.85 # 20287 # 22080 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_25 - 598 KaiC PF06745.8 227 2e-05 15.7 0.0 2 2 0.086 4.4 -1.7 0.0 133 156 329 352 322 358 0.85 # 20287 # 22080 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_41 - 336 AAA_14 PF13173.1 128 2.9e-05 15.9 0.2 1 1 2.3e-06 0.00012 14.0 0.0 2 54 160 211 159 254 0.75 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 GvpD PF07088.6 484 0.00026 11.3 0.0 1 1 6.5e-06 0.00033 10.9 0.0 8 42 158 192 150 258 0.83 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_51 - 438 TIGR03594 TIGR03594 432 2e-09 28.5 0.4 1 3 0.03 1.5 -0.8 0.0 176 211 4 42 2 48 0.74 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_51 - 438 TIGR03594 TIGR03594 432 2e-09 28.5 0.4 2 3 1e-08 5.1e-07 20.6 0.1 30 123 50 135 40 154 0.87 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_51 - 438 TIGR03594 TIGR03594 432 2e-09 28.5 0.4 3 3 0.001 0.052 4.1 0.0 304 348 196 240 186 266 0.82 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_41 - 336 AAA_29 PF13555.1 62 2.1e-05 16.0 0.0 1 1 9.3e-07 4.8e-05 14.9 0.0 22 40 159 177 140 184 0.81 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_25 - 598 AAA PF00004.24 132 5.5e-05 15.4 0.2 1 2 2.5e-05 0.0013 10.9 0.0 2 105 37 166 36 177 0.66 # 20287 # 22080 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_25 - 598 AAA PF00004.24 132 5.5e-05 15.4 0.2 2 2 0.025 1.3 1.2 0.0 47 74 411 434 377 459 0.70 # 20287 # 22080 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_41 - 336 Sigma54_activat PF00158.21 168 7.4e-05 14.2 0.0 1 1 3.2e-06 0.00016 13.1 0.0 14 43 152 181 143 198 0.84 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_51 - 438 MMR_HSR1 PF01926.18 116 9.4e-09 27.3 0.1 1 1 4.5e-10 2.3e-08 26.0 0.1 4 116 8 129 5 129 0.68 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_42 - 604 TraG-D_C PF12696.2 128 1.5e-28 91.2 0.0 1 2 1.9e-29 9.5e-28 88.6 0.0 2 127 406 528 405 529 0.89 # 34477 # 36288 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.297 1_42 - 604 TraG-D_C PF12696.2 128 1.5e-28 91.2 0.0 2 2 0.069 3.5 -0.5 0.0 52 70 580 601 560 603 0.74 # 34477 # 36288 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.297 1_41 - 336 NTPase_1 PF03266.10 168 0.00034 12.3 0.1 1 1 1.4e-05 0.00069 11.3 0.1 1 23 162 184 162 192 0.88 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_25 - 598 DnaB_C PF03796.10 259 2.7e-06 18.4 0.0 1 2 2.1e-07 1.1e-05 16.3 0.0 13 117 27 136 23 156 0.79 # 20287 # 22080 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_25 - 598 DnaB_C PF03796.10 259 2.7e-06 18.4 0.0 2 2 0.011 0.57 0.9 0.0 129 185 119 177 101 179 0.77 # 20287 # 22080 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_12 - 1933 Methyltransf_26 PF13659.1 117 2.9e-13 41.9 0.0 1 1 1.8e-14 9e-13 40.3 0.0 3 116 312 422 310 423 0.84 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_41 - 336 AAA_30 PF13604.1 196 0.00071 11.1 0.0 1 1 2.2e-05 0.0011 10.5 0.0 12 44 155 186 146 193 0.72 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 FtsK_SpoIIIE PF01580.13 205 5.7e-08 24.4 0.0 1 1 1.9e-09 9.6e-08 23.7 0.0 36 59 154 181 134 187 0.77 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_12 - 1933 MTS PF05175.9 170 2.7e-05 15.6 0.0 1 1 1.5e-06 7.6e-05 14.1 0.0 31 142 309 423 302 443 0.75 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_41 - 336 ABC_tran PF00005.22 137 2e-07 23.4 0.0 1 1 8.3e-09 4.2e-07 22.3 0.0 5 50 154 200 152 226 0.84 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_12 - 1933 Eco57I PF07669.6 106 2.2e-08 26.4 2.1 1 1 1.3e-09 6.6e-08 24.9 0.3 3 104 372 473 370 475 0.83 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_30 - 923 AAA_10 PF12846.2 304 3e-38 123.8 1.6 1 1 4.6e-39 7.8e-38 122.5 0.4 2 301 546 843 545 845 0.84 # 23994 # 26762 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.293 1_41 - 336 AAA_10 PF12846.2 304 2.5e-06 19.0 0.0 1 1 1.8e-07 3.1e-06 18.7 0.0 2 37 161 196 160 333 0.74 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_42 - 604 AAA_10 PF12846.2 304 7.7e-05 14.1 0.0 1 1 7.8e-06 0.00013 13.3 0.0 32 302 154 490 127 491 0.75 # 34477 # 36288 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.297 1_12 - 1933 ResIII PF04851.10 184 2.7e-10 32.3 9.7 1 1 1e-11 2.7e-10 32.3 9.7 2 161 1000 1196 999 1243 0.57 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_41 - 336 ResIII PF04851.10 184 3.6e-05 15.6 0.0 1 1 2.8e-06 7.2e-05 14.6 0.0 3 64 145 201 143 237 0.72 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_51 - 438 GTP_EFTU_D2 PF03144.20 74 8.2e-10 30.7 0.0 1 1 3.4e-11 1.7e-09 29.7 0.0 3 60 265 316 263 323 0.90 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_12 - 1933 DEAD PF00270.24 169 1.2e-08 26.6 0.8 1 2 6.2e-08 1.6e-06 19.7 0.1 2 107 1004 1110 1003 1245 0.78 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_12 - 1933 DEAD PF00270.24 169 1.2e-08 26.6 0.8 2 2 0.073 1.9 -0.1 0.0 120 150 1886 1918 1844 1927 0.70 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_41 - 336 DEAD PF00270.24 169 2.5e-06 19.0 0.0 1 1 1.9e-07 4.8e-06 18.1 0.0 2 69 148 212 147 243 0.71 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_42 - 604 TrwB_AAD_bind PF10412.4 386 5.4e-21 66.5 0.0 1 2 2.5e-06 6.4e-05 13.6 0.0 39 150 147 270 124 297 0.71 # 34477 # 36288 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.297 1_42 - 604 TrwB_AAD_bind PF10412.4 386 5.4e-21 66.5 0.0 2 2 1.2e-17 3.1e-16 50.8 0.0 185 380 345 542 306 544 0.83 # 34477 # 36288 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.297 1_41 - 336 TrwB_AAD_bind PF10412.4 386 0.0001 13.0 0.0 1 1 6.1e-06 0.00016 12.3 0.0 16 42 161 187 154 217 0.85 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_42 - 604 T4SS-DNA_transf PF02534.9 469 2e-108 354.8 0.1 1 1 5.5e-110 2.8e-108 354.3 0.1 3 461 94 565 82 571 0.88 # 34477 # 36288 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.297 1_51 - 438 GTP_EFTU PF00009.22 188 1.2e-60 196.1 0.4 1 1 3.7e-62 1.9e-60 195.5 0.4 2 185 2 237 1 240 0.92 # 43512 # 44825 # 1 # ID=1_51;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.387 1_41 - 336 RNA_helicase PF00910.17 107 0.00013 14.1 0.0 1 1 6e-06 0.0003 12.9 0.0 1 23 163 185 163 224 0.79 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 UPF0079 PF02367.12 123 1.6e-05 16.5 0.0 1 1 6e-07 3.1e-05 15.6 0.0 8 42 153 187 147 205 0.85 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_1 - 201 EFG_IV PF03764.13 120 6.7e-23 72.5 0.0 1 1 1.8e-24 9.2e-23 72.1 0.0 29 120 2 93 1 93 0.98 # 3 # 605 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.436 1_41 - 336 AAA_24 PF13479.1 213 0.00012 13.7 0.0 1 1 5e-06 0.00025 12.6 0.0 5 33 162 188 159 217 0.84 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_41 - 336 NACHT PF05729.7 166 1.8e-05 16.4 0.0 1 1 6e-07 3.1e-05 15.6 0.0 3 22 163 182 161 188 0.89 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_25 - 598 AAA_25 PF13481.1 194 6.1e-22 69.9 0.0 1 1 4.5e-23 1.2e-21 69.0 0.0 30 193 30 175 20 176 0.90 # 20287 # 22080 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.274 1_41 - 336 AAA_25 PF13481.1 194 0.00014 13.3 0.0 1 1 8.2e-06 0.00021 12.7 0.0 29 56 157 183 130 200 0.76 # 33469 # 34476 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.337 1_12 - 1933 SNF2_N PF00176.18 299 5.1e-21 66.6 5.2 1 3 1.7e-22 8.7e-21 65.8 0.4 24 204 1015 1275 955 1336 0.76 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_12 - 1933 SNF2_N PF00176.18 299 5.1e-21 66.6 5.2 2 3 0.0096 0.49 1.0 0.1 194 286 1462 1558 1445 1567 0.73 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 1_12 - 1933 SNF2_N PF00176.18 299 5.1e-21 66.6 5.2 3 3 0.043 2.2 -1.1 0.1 123 151 1873 1902 1836 1925 0.70 # 6921 # 12719 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.297 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4b175106-9845-4698-bd60-e819b8650b22 # Target file: checkm_output/bins/pCP011017.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pCP011017.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4b175106-9845-4698-bd60-e819b8650b22 checkm_output/bins/pCP011017.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:37:20 2020 # [ok]