# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_21 - 318 cobW PF02492.14 178 0.00015 13.1 0.0 1 1 6e-06 0.00029 12.2 0.0 4 45 147 187 145 206 0.75 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_3 - 223 MipZ PF09140.6 261 3.8e-16 50.8 0.1 1 1 1.3e-16 6.2e-15 46.8 0.1 2 140 3 125 2 148 0.79 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_3 - 223 YhjQ PF06564.7 244 3.2e-08 25.1 0.0 1 2 4.2e-09 2.1e-07 22.4 0.0 1 49 1 49 1 59 0.84 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_3 - 223 YhjQ PF06564.7 244 3.2e-08 25.1 0.0 2 2 0.022 1.1 0.4 0.0 103 145 68 111 53 123 0.73 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_12 - 153 SSB PF00436.20 104 7.4e-28 88.4 0.0 1 1 2e-29 9.7e-28 88.1 0.0 1 103 1 103 1 104 0.99 # 5521 # 5979 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_27 - 823 DUF87 PF01935.12 229 0.015 6.9 19.5 1 1 2.2e-05 0.0011 10.7 5.2 25 59 468 501 465 647 0.57 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_21 - 318 Septin PF00735.13 281 5.2e-05 14.2 1.3 1 2 0.058 2.8 -1.3 0.1 77 117 36 76 34 79 0.80 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 Septin PF00735.13 281 5.2e-05 14.2 1.3 2 2 1.7e-06 8.3e-05 13.5 0.1 6 55 145 200 141 215 0.63 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_27 - 823 AAA_22 PF13401.1 131 1e-05 17.6 0.0 1 1 5e-06 0.00012 14.1 0.0 4 31 466 493 463 592 0.67 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_21 - 318 AAA_22 PF13401.1 131 4.9e-05 15.4 0.1 1 1 1.2e-05 0.0003 12.9 0.0 3 32 142 171 138 288 0.84 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_3 - 223 SRP54 PF00448.17 196 3.7e-08 24.9 0.0 1 1 1.6e-09 8e-08 23.8 0.0 11 133 12 135 10 152 0.73 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_21 - 318 KAP_NTPase PF07693.9 325 7.1e-05 13.7 0.0 1 1 1.8e-06 9e-05 13.4 0.0 23 48 146 226 132 299 0.70 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_27 - 823 AAA_17 PF13207.1 121 6.7e-08 25.3 0.6 1 1 2.6e-08 6.4e-07 22.2 0.1 4 64 471 549 470 604 0.58 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_21 - 318 AAA_17 PF13207.1 121 2.2e-05 17.2 0.1 1 2 0.093 2.3 1.0 0.0 31 78 22 73 10 122 0.56 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 AAA_17 PF13207.1 121 2.2e-05 17.2 0.1 2 2 1.1e-05 0.00027 13.7 0.0 2 38 146 182 145 257 0.70 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 Miro PF08477.8 119 2e-06 20.2 0.0 1 1 7.2e-08 3.5e-06 19.4 0.0 2 47 146 188 145 234 0.69 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_3 - 223 ArsA_ATPase PF02374.10 305 2.3e-09 28.6 0.0 1 1 8.7e-11 4.3e-09 27.7 0.0 8 46 9 47 1 91 0.88 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_21 - 318 T2SE PF00437.15 272 1.5e-50 163.4 0.0 1 1 3.9e-52 1.9e-50 163.1 0.0 11 271 20 294 12 295 0.90 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 Zeta_toxin PF06414.7 201 4.6e-06 17.7 0.0 1 1 1.7e-07 8.5e-06 16.8 0.0 14 49 141 177 131 204 0.89 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_3 - 223 VirC1 PF07015.6 231 1.9e-11 35.3 0.0 1 1 4.7e-13 2.3e-11 35.1 0.0 1 149 1 148 1 199 0.86 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_3 - 223 Fer4_NifH PF00142.13 273 1.1e-06 19.9 0.0 1 1 4.9e-08 2.4e-06 18.7 0.0 7 40 9 42 3 58 0.89 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_21 - 318 Arch_ATPase PF01637.13 234 5.3e-05 14.9 0.1 1 1 1.7e-06 8.3e-05 14.2 0.1 10 73 135 198 133 264 0.78 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 AAA_16 PF13191.1 185 2e-05 16.5 0.0 1 1 6.2e-07 3e-05 15.9 0.0 24 51 143 170 126 217 0.86 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_3 - 223 AAA_23 PF13476.1 202 8.4e-06 18.1 2.9 1 1 5.2e-07 1.3e-05 17.5 2.9 29 124 12 168 10 222 0.44 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_21 - 318 AAA_23 PF13476.1 202 0.00019 13.7 0.2 1 1 7.8e-06 0.00019 13.7 0.2 17 39 139 163 125 165 0.84 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 AAA_18 PF13238.1 129 5.6e-06 18.6 0.1 1 1 8.2e-07 2e-05 16.8 0.0 1 63 146 212 146 231 0.83 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_27 - 823 AAA_18 PF13238.1 129 0.00038 12.7 0.1 1 1 1.5e-05 0.00038 12.7 0.1 2 35 470 506 470 582 0.66 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_3 - 223 CbiA PF01656.18 195 5.8e-25 79.7 0.1 1 1 1.5e-26 7.6e-25 79.3 0.1 1 173 4 163 4 189 0.75 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_21 - 318 IIGP PF05049.8 376 3e-05 14.8 0.0 1 2 3e-06 0.00015 12.5 0.0 26 55 134 163 127 169 0.89 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 IIGP PF05049.8 376 3e-05 14.8 0.0 2 2 0.031 1.5 -0.7 0.0 103 124 273 294 265 299 0.79 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 AAA_14 PF13173.1 128 2.2e-05 16.3 0.0 1 1 8.8e-07 4.3e-05 15.3 0.0 1 70 142 224 142 257 0.64 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 AAA_29 PF13555.1 62 6.4e-06 17.6 0.0 1 1 5.1e-07 1.3e-05 16.7 0.0 19 47 140 167 130 181 0.75 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_27 - 823 AAA_29 PF13555.1 62 0.00023 12.6 0.0 1 1 2e-05 0.0005 11.5 0.0 21 39 465 482 453 491 0.83 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_21 - 318 Sigma54_activat PF00158.21 168 5.1e-05 14.7 0.0 1 1 1.7e-06 8.4e-05 14.0 0.0 11 49 132 170 123 186 0.83 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 DUF258 PF03193.11 161 4.3e-06 17.9 0.0 1 1 1.6e-07 7.6e-06 17.1 0.0 22 61 129 169 113 194 0.80 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_19 - 629 TraG-D_C PF12696.2 128 1.4e-27 88.0 0.0 1 1 2.9e-29 1.4e-27 88.0 0.0 2 125 420 536 419 539 0.89 # 11370 # 13256 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_3 - 223 AAA_31 PF13614.1 157 5.9e-09 27.9 0.0 1 2 1.2e-08 5.8e-07 21.5 0.0 2 66 3 80 2 83 0.75 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_3 - 223 AAA_31 PF13614.1 157 5.9e-09 27.9 0.0 2 2 0.0014 0.071 4.9 0.0 116 152 79 117 71 121 0.79 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_21 - 318 FtsK_SpoIIIE PF01580.13 205 1.9e-07 22.6 0.0 1 1 1.7e-08 4.1e-07 21.5 0.0 34 61 138 166 130 170 0.88 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_27 - 823 FtsK_SpoIIIE PF01580.13 205 9.9e-07 20.3 0.0 1 1 9.1e-08 2.2e-06 19.1 0.0 31 64 457 492 432 496 0.82 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_21 - 318 Dynamin_N PF00350.18 168 0.00011 13.9 0.0 1 1 6.1e-06 0.0003 12.5 0.0 1 40 146 184 146 219 0.66 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 ABC_tran PF00005.22 137 4.8e-07 22.1 0.1 1 1 2.9e-08 7.1e-07 21.5 0.1 8 70 140 201 133 278 0.72 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_27 - 823 ABC_tran PF00005.22 137 4.7e-05 15.6 3.0 1 2 0.085 2.1 0.6 0.2 79 110 154 193 85 254 0.60 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_27 - 823 ABC_tran PF00005.22 137 4.7e-05 15.6 3.0 2 2 6e-06 0.00015 14.0 0.2 11 37 466 492 463 638 0.76 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_27 - 823 AAA_10 PF12846.2 304 5.1e-36 116.5 1.8 1 1 3.1e-37 5.1e-36 116.5 1.8 1 304 466 742 466 742 0.91 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_19 - 629 AAA_10 PF12846.2 304 3.6e-08 25.0 2.4 1 1 4.9e-09 8e-08 23.9 2.4 4 299 138 497 136 499 0.65 # 11370 # 13256 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_21 - 318 AAA_10 PF12846.2 304 4e-05 15.0 0.4 1 1 4.2e-06 6.8e-05 14.3 0.4 2 36 144 178 143 313 0.68 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 ResIII PF04851.10 184 4.1e-05 15.3 0.0 1 1 1.3e-06 6.3e-05 14.7 0.0 22 70 135 190 89 231 0.80 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_20 - 136 RRF PF01765.14 165 3.3e-05 15.3 4.7 1 1 1e-06 5e-05 14.7 4.6 63 129 60 128 13 135 0.82 # 13253 # 13660 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_21 - 318 DUF2075 PF09848.4 352 1e-05 16.5 0.0 1 1 2.9e-07 1.4e-05 16.0 0.0 1 51 143 208 143 241 0.67 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_27 - 823 PduV-EutP PF10662.4 143 6.6e-05 14.3 0.0 1 1 3.9e-06 0.00019 12.8 0.0 3 28 468 493 466 518 0.89 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_21 - 318 DEAD PF00270.24 169 2.3e-05 15.9 0.0 1 1 8e-07 3.9e-05 15.1 0.0 8 58 136 184 132 219 0.72 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_19 - 629 TrwB_AAD_bind PF10412.4 386 3.3e-29 93.5 0.0 1 2 3.5e-06 5.7e-05 13.7 0.0 16 148 136 282 122 291 0.77 # 11370 # 13256 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_19 - 629 TrwB_AAD_bind PF10412.4 386 3.3e-29 93.5 0.0 2 2 1.3e-25 2.1e-24 77.7 0.0 141 343 315 516 298 551 0.82 # 11370 # 13256 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_27 - 823 TrwB_AAD_bind PF10412.4 386 5.6e-12 36.8 0.2 1 2 1.6e-05 0.00025 11.6 0.1 15 38 466 489 461 516 0.89 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_27 - 823 TrwB_AAD_bind PF10412.4 386 5.6e-12 36.8 0.2 2 2 6.7e-09 1.1e-07 22.6 0.0 222 366 635 778 625 794 0.74 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_21 - 318 TrwB_AAD_bind PF10412.4 386 4.5e-06 17.3 0.0 1 1 4.3e-07 7e-06 16.7 0.0 14 51 142 179 138 190 0.86 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 Sigma54_activ_2 PF14532.1 138 1.5e-05 17.0 0.0 1 1 5.3e-07 2.6e-05 16.2 0.0 12 60 134 182 132 196 0.88 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_19 - 629 T4SS-DNA_transf PF02534.9 469 2.1e-74 242.6 5.3 1 1 1.5e-75 7.6e-74 240.7 5.3 46 453 137 568 94 606 0.83 # 11370 # 13256 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_3 - 223 ArgK PF03308.11 267 0.0002 12.0 0.0 1 1 7.8e-06 0.00038 11.1 0.0 39 69 12 42 6 50 0.92 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_21 - 318 Pox_A32 PF04665.7 241 1.8e-05 16.0 0.0 1 1 6.4e-07 3.1e-05 15.2 0.0 7 38 137 168 132 191 0.89 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 RNA_helicase PF00910.17 107 0.00024 13.2 0.0 1 1 3.5e-05 0.00086 11.4 0.0 1 38 146 186 146 206 0.74 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_3 - 223 RNA_helicase PF00910.17 107 0.00028 13.0 0.6 1 2 0.00051 0.012 7.7 0.0 6 30 9 31 4 89 0.75 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_3 - 223 RNA_helicase PF00910.17 107 0.00028 13.0 0.6 2 2 0.012 0.3 3.3 0.0 62 84 133 156 116 168 0.75 # 1510 # 2178 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_21 - 318 UPF0079 PF02367.12 123 0.00011 13.7 0.0 1 1 4.8e-06 0.00024 12.7 0.0 8 45 136 173 132 176 0.84 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 NACHT PF05729.7 166 7.1e-05 14.4 0.0 1 1 5.2e-06 0.00013 13.6 0.0 3 24 146 167 144 172 0.90 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_27 - 823 NACHT PF05729.7 166 0.00011 13.8 0.5 1 2 0.018 0.43 2.1 0.0 13 48 134 166 132 227 0.76 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_27 - 823 NACHT PF05729.7 166 0.00011 13.8 0.5 2 2 0.00018 0.0043 8.6 0.0 4 24 470 490 468 497 0.85 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_48 - 189 AAA_25 PF13481.1 194 2.4e-05 15.7 0.1 1 1 1.9e-06 3.2e-05 15.3 0.1 106 177 41 121 6 124 0.77 # 33072 # 33638 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.250 1_27 - 823 AAA_25 PF13481.1 194 7.9e-05 14.0 0.0 1 1 1.2e-05 0.00019 12.7 0.0 27 57 461 490 444 507 0.81 # 17849 # 20317 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_21 - 318 AAA_25 PF13481.1 194 0.00048 11.4 0.0 1 1 4.1e-05 0.00067 11.0 0.0 26 82 136 189 114 259 0.83 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_21 - 318 AAA_28 PF13521.1 163 7e-06 18.0 0.0 1 1 3e-07 1.5e-05 16.9 0.0 2 94 146 238 145 260 0.69 # 13670 # 14623 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/039d5ba4-5d88-4a5e-894c-111b353bef0e # Target file: checkm_output/bins/pCP007184.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pCP007184.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/039d5ba4-5d88-4a5e-894c-111b353bef0e checkm_output/bins/pCP007184.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:37:11 2020 # [ok]