# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 489 Seryl_tRNA_N PF02403.17 108 0.031 4.3 37.8 1 3 0.089 1.1 -0.7 3.3 42 94 54 112 50 127 0.54 # 1817 # 3283 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_2 - 489 Seryl_tRNA_N PF02403.17 108 0.031 4.3 37.8 2 3 0.0015 0.018 5.0 12.9 24 108 230 318 213 318 0.87 # 1817 # 3283 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_2 - 489 Seryl_tRNA_N PF02403.17 108 0.031 4.3 37.8 3 3 6.4e-05 0.00077 9.5 5.2 23 97 378 449 362 460 0.81 # 1817 # 3283 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_2 - 489 AAA_13 PF13166.1 712 0.039 2.1 41.6 1 3 0.00072 0.0086 4.3 2.7 138 192 42 96 9 136 0.54 # 1817 # 3283 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_2 - 489 AAA_13 PF13166.1 712 0.039 2.1 41.6 2 3 0.0017 0.02 3.1 17.7 289 409 189 308 175 349 0.56 # 1817 # 3283 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 1_2 - 489 AAA_13 PF13166.1 712 0.039 2.1 41.6 3 3 0.0015 0.018 3.3 20.8 283 464 248 438 247 481 0.65 # 1817 # 3283 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.359 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d9780b56-7a6a-48bd-ac5d-3ea4e702e0f2 # Target file: checkm_output/bins/pCP001286.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pCP001286.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d9780b56-7a6a-48bd-ac5d-3ea4e702e0f2 checkm_output/bins/pCP001286.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:36:51 2020 # [ok]